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The map label for this gene is hpcR [H]

Identifier: 86748832

GI number: 86748832

Start: 1944366

End: 1944902

Strand: Direct

Name: hpcR [H]

Synonym: RPB_1709

Alternate gene names: 86748832

Gene position: 1944366-1944902 (Clockwise)

Preceding gene: 86748825

Following gene: 86748833

Centisome position: 36.47

GC content: 65.18

Gene sequence:

>537_bases
ATGCGCAGGTTCTCGCGCTCCCTGCCGATGGCGCTGCTGCGCGGACGCGAGGCGGTGATGCGGCATTTCCGGCCGCTACT
GCGGGCTCATGGCCTCAGCGAGCAACAATGGCGGATCCTGCGGGCGCTCACCGAGGTCGAGGCGATCGAGGTCACCGAAT
TGGCCGACCGCGCTTTCCTGCTCGGGCCAAGTCTGTCGCGGATGCTGCGCGATTTGGAGGCGCGCAAGTGGATCGCGCGG
AAGCCGGCAAAGGACGATCAGCGGCGCAGCCGGGTGTCGATCACGCCCAAGGGGCTGAAACTGATCGAGACCGTCGCACC
GTTTTCCGAGCAGATCTATGCGGACATCGCTCGTCATTTCGGTGATGCGAAGCTCGCTGCGCTGCAGGACATGTTGGGCG
CGCTGGAAGCCGATTTGACGAGGATGCCGGTGCGGCATGCGGCCGATGCGGTGGACAGCGGACCGGATTTTCGGTCAACT
GTACGGAGCAAACGACGGCCGGCGAAAAGCACGGCCGCAAAGGGAGGGCGACGATGA

Upstream 100 bases:

>100_bases
AGCGAAGCGAAGCGATCCAGCGCCGCGACCCGAGGCTGGATTGCTTGGGCGCGAACCGCCTCGCAATGGCGAGGAGAAAT
CGGCTGAAAACAAGGCGCCG

Downstream 100 bases:

>100_bases
TCGGGCAGCGCCGGGCAGCGCGGCAGGGCCGCGGCCGCAAGGTCACTCTCCGCGAGCGTGCACCAACATGGTGACAATCA
AGGTCGACCGACTGATCGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIEVTELADRAFLLGPSLSRMLRDLEARKWIAR
KPAKDDQRRSRVSITPKGLKLIETVAPFSEQIYADIARHFGDAKLAALQDMLGALEADLTRMPVRHAADAVDSGPDFRST
VRSKRRPAKSTAAKGGRR

Sequences:

>Translated_178_residues
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIEVTELADRAFLLGPSLSRMLRDLEARKWIAR
KPAKDDQRRSRVSITPKGLKLIETVAPFSEQIYADIARHFGDAKLAALQDMLGALEADLTRMPVRHAADAVDSGPDFRST
VRSKRRPAKSTAAKGGRR
>Mature_178_residues
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIEVTELADRAFLLGPSLSRMLRDLEARKWIAR
KPAKDDQRRSRVSITPKGLKLIETVAPFSEQIYADIARHFGDAKLAALQDMLGALEADLTRMPVRHAADAVDSGPDFRST
VRSKRRPAKSTAAKGGRR

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20149; Mature: 20149

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIEVTELADRAFL
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPSLSRMLRDLEARKWIARKPAKDDQRRSRVSITPKGLKLIETVAPFSEQIYADIARHF
HCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GDAKLAALQDMLGALEADLTRMPVRHAADAVDSGPDFRSTVRSKRRPAKSTAAKGGRR
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIEVTELADRAFL
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPSLSRMLRDLEARKWIARKPAKDDQRRSRVSITPKGLKLIETVAPFSEQIYADIARHF
HCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GDAKLAALQDMLGALEADLTRMPVRHAADAVDSGPDFRSTVRSKRRPAKSTAAKGGRR
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]