| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748825
Identifier: 86748825
GI number: 86748825
Start: 1936218
End: 1937465
Strand: Direct
Name: 86748825
Synonym: RPB_1702
Alternate gene names: NA
Gene position: 1936218-1937465 (Clockwise)
Preceding gene: 86748824
Following gene: 86748832
Centisome position: 36.32
GC content: 68.43
Gene sequence:
>1248_bases ATGACCGAGCTTGCAATCGACGATGACAATTCCGCCAGCGGCGCCCGCATCAATCGCGCCGGCGTTTACGTCGCGCTGCT GCAATTGCTGTTTGCGCTGTGCTGGACCATCTATGTCGTCTTCCTGCCGAAGCTTGCCGCCGAGGTGGGCATCGCGCCGG GCGCGGTGATCCTGATCCTGATGCTCGACCAGGCGATCTTCACCATCGCCGACACCGCAATGGGCATCGCCGCCGACAAA GTCGGGGCGCTCACCAGCCGGATCGGCCTGTTCGTCGGCATCGCCACCGCCGTGTCCTGCGCGGCGTTCGTTGCGCTGCC CTTTGTGACGTCCGGTGGGCCGTCCGCGCAGGTGGCGTTCATCGGCCTGATCGTGGTGTGGGCGGCGACGTCGTCGGCGC TGCGCGCGCCGCCGCTGACGCTGTTCGGCAAATACGGCGCGCGGCCGTCGCTGCCGTGGCTGTCGGCGCTCACCATGCTC GGCTACGGACTCGCCGGCGCGGCATCGCCCTATCTGGGCGTGGTGATGAAGAACATCGACGCGCGGCTGCCGTTCGTGAT CTCCAGCGTCGTGTTGCTGATCACCACGCTGGCGCTGTCGCGGGTCGAGCGCGGACTGTCGGGAGCGCAGCCCAAGCCGA AGCCACGCGACCCCGGCAAGGCGCTTGGACCCCTGCCGGCCCTGTTCATCGCGGCGATGGTGCTGCTCGCGCTCGGCTAT CAGATGCATTTTGCCCTGAACAGCGCGCCGATGTTCTTGCGCTTCGCCAAGCCCGACGATCTGCAATGGCTGATGCCGGT GTTCTGGATCGGCTTCAACATCGCGTTGTTTCCGGCGAGCGTCGTGGTCAAGCATCGCGGCGGACTGATCGTGATGGGCG CCGCCGGCCTGCTCGGGGCGCTGGCGGTGGCCGGTGCGGAATACGCCGGAAACTTGAACATGCTGATCGCGGCGCAATTC CTCGCGGGCGCAGCGTGGGGCTGCATGCTCATGAGCGCTGTCTCGGCGGCGCTGGCGATCGGACAGACCGGCGCCGAGGG CCGGCTCACCGGGCTGGTGTTCTCGGCGCTGGCGCTCGCCACCTTTGCCCGGATGGCGGCGGTGGCCGGCGGGCTGCAGA AGCTGCCGGACTACGCGCCGCTGCTGTACTGGGCACCGGTCGCGTGCTGGTCGGTCGCGGGCGCCGGATTGCTGGCGCTG GCCGCATCGCGGCTGCGCAGAGCGGAAACAGTCACAGCGACGAGCTGA
Upstream 100 bases:
>100_bases CGACAGCGCATCAACCTGACGTTTCGCAAGGCGCTGTAAGTGCGGCAGATCACTTTGACCGCACCGCAATCTCCTCTATC CTGACGGCGGGAGAGGGCTG
Downstream 100 bases:
>100_bases TTGGAGAGCTCGTCATTCCGGAGCGCCGCGCAGCGGCGACCTCGGAATTCTCCCGGGGCCTCACACCATGATGGGCCGTG CTCACGGCTTCGCCGGATGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTELAIDDDNSASGARINRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILILMLDQAIFTIADTAMGIAADK VGALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAFIGLIVVWAATSSALRAPPLTLFGKYGARPSLPWLSALTML GYGLAGAASPYLGVVMKNIDARLPFVISSVVLLITTLALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGY QMHFALNSAPMFLRFAKPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGALAVAGAEYAGNLNMLIAAQF LAGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALATFARMAAVAGGLQKLPDYAPLLYWAPVACWSVAGAGLLAL AASRLRRAETVTATS
Sequences:
>Translated_415_residues MTELAIDDDNSASGARINRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILILMLDQAIFTIADTAMGIAADK VGALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAFIGLIVVWAATSSALRAPPLTLFGKYGARPSLPWLSALTML GYGLAGAASPYLGVVMKNIDARLPFVISSVVLLITTLALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGY QMHFALNSAPMFLRFAKPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGALAVAGAEYAGNLNMLIAAQF LAGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALATFARMAAVAGGLQKLPDYAPLLYWAPVACWSVAGAGLLAL AASRLRRAETVTATS >Mature_414_residues TELAIDDDNSASGARINRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILILMLDQAIFTIADTAMGIAADKV GALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAFIGLIVVWAATSSALRAPPLTLFGKYGARPSLPWLSALTMLG YGLAGAASPYLGVVMKNIDARLPFVISSVVLLITTLALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGYQ MHFALNSAPMFLRFAKPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGALAVAGAEYAGNLNMLIAAQFL AGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALATFARMAAVAGGLQKLPDYAPLLYWAPVACWSVAGAGLLALA ASRLRRAETVTATS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42800; Mature: 42669
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELAIDDDNSASGARINRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILIL CCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLDQAIFTIADTAMGIAADKVGALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IGLIVVWAATSSALRAPPLTLFGKYGARPSLPWLSALTMLGYGLAGAASPYLGVVMKNID HHHHHHHHHCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHC ARLPFVISSVVLLITTLALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCH QMHFALNSAPMFLRFAKPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGA HHEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHH LAVAGAEYAGNLNMLIAAQFLAGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TFARMAAVAGGLQKLPDYAPLLYWAPVACWSVAGAGLLALAASRLRRAETVTATS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TELAIDDDNSASGARINRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILIL CCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLDQAIFTIADTAMGIAADKVGALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IGLIVVWAATSSALRAPPLTLFGKYGARPSLPWLSALTMLGYGLAGAASPYLGVVMKNID HHHHHHHHHCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHC ARLPFVISSVVLLITTLALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCH QMHFALNSAPMFLRFAKPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGA HHEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHH LAVAGAEYAGNLNMLIAAQFLAGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TFARMAAVAGGLQKLPDYAPLLYWAPVACWSVAGAGLLALAASRLRRAETVTATS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA