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The map label for this gene is yisS [H]

Identifier: 86748732

GI number: 86748732

Start: 1812226

End: 1813224

Strand: Direct

Name: yisS [H]

Synonym: RPB_1608

Alternate gene names: 86748732

Gene position: 1812226-1813224 (Clockwise)

Preceding gene: 86748729

Following gene: 86748733

Centisome position: 33.99

GC content: 66.47

Gene sequence:

>999_bases
ATGACGTCCCCATCTGATTCGGTCACGAAATCCCCGCTCCGGGTCGGCGTCATTGGCGCCGGCGTCATGGGAACCAATCA
TGGGCGGGTGCTGGCCGGATTACCGGGGGTGACGCTGGTCGGCATCGTCGATCCGCTGGACGAGCATCGCAACCGGGCGG
TCGAGTTGATCGGCTGCAAGACTTTCGCAACGGTGGACGAACTGTTGCTCGCGGGCGTCGACGCGGTGACGATCGCGGCG
CCGACGCATCTGCATCACGAGATCGCGCTGACCTGTCTCGGCCGCGGCATTCATTCGCTCGTGGAGAAACCGATCGCCTC
GACCGTCGCGGAGGGGCGCGAGATCGTCGCCGCCGCCCGCAAAGCCGGCGTCACGTTGATGGTCGGGCACGTCGAGCGCT
TCAACCCGGCGGTCGCGGCGATCAAGCAGGCGATCCGCAATGAGGACATCCTGTCGATCGGCATCACCCGAGTCGGGCCG
TTTCCGCCGCGAATGTCCAATGTCGGGGTCGTGATCGATCTCGCCGTGCACGACATCGACCTGATCCGCTGGTTCACCGA
TTCCGAGATCACCGAGGTTCAGCCGCAGCTCTCCAGCGCGATCGCCGAGCGCGAGGACATCGCGCTGCTGCAGTTTCGGA
CCGCCTCGGGCGTGCTCGCCCACATCAACACCAACTGGCTGACGCCCTTCAAGGCGCGCACCGTGACGGTCGCGACCCGC
GGCAAGTATGTGATGGGCGATCTGCTCACGCGGCAAGTGACCGAGTGCTTCGGCTTCAAGGCCGACGGCAGCTATTCGAT
GCGGCATCTGCCGGTCGGGCACGACGAGCCGCTGCGCGCCGAATTGATCGCCTTCCTGAACGCCGTCCGTAGCAATGGCG
TGCCGGCCGTTACCGGCGAGGAAGGGGTCGCCAGCCTCGAGATCGCCATCCAGTGTCTGGAGCAGCCGCCGAAAGTCGCC
GCGGGCGGCCGTAAAGAGCCGCTGCGCGCCGCCGGCTAG

Upstream 100 bases:

>100_bases
TCTCTGAATCAAAACGTGTTTGGGCAATTTCCGGGGCTCATCGCCACATCTGTGGCGGCATGCTAGGAAGCCGCATCCGC
AATTTCCGAGGCATCACGCC

Downstream 100 bases:

>100_bases
GCGCCGCCCACTCATCGCGCGCCGCCAGGCGCATTGTCGTTCCGATTCATCAAGCCGAGTGCCATGAACCAGCATCTTCG
TACCGATCCCGTGCCTTTCG

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTSPSDSVTKSPLRVGVIGAGVMGTNHGRVLAGLPGVTLVGIVDPLDEHRNRAVELIGCKTFATVDELLLAGVDAVTIAA
PTHLHHEIALTCLGRGIHSLVEKPIASTVAEGREIVAAARKAGVTLMVGHVERFNPAVAAIKQAIRNEDILSIGITRVGP
FPPRMSNVGVVIDLAVHDIDLIRWFTDSEITEVQPQLSSAIAEREDIALLQFRTASGVLAHINTNWLTPFKARTVTVATR
GKYVMGDLLTRQVTECFGFKADGSYSMRHLPVGHDEPLRAELIAFLNAVRSNGVPAVTGEEGVASLEIAIQCLEQPPKVA
AGGRKEPLRAAG

Sequences:

>Translated_332_residues
MTSPSDSVTKSPLRVGVIGAGVMGTNHGRVLAGLPGVTLVGIVDPLDEHRNRAVELIGCKTFATVDELLLAGVDAVTIAA
PTHLHHEIALTCLGRGIHSLVEKPIASTVAEGREIVAAARKAGVTLMVGHVERFNPAVAAIKQAIRNEDILSIGITRVGP
FPPRMSNVGVVIDLAVHDIDLIRWFTDSEITEVQPQLSSAIAEREDIALLQFRTASGVLAHINTNWLTPFKARTVTVATR
GKYVMGDLLTRQVTECFGFKADGSYSMRHLPVGHDEPLRAELIAFLNAVRSNGVPAVTGEEGVASLEIAIQCLEQPPKVA
AGGRKEPLRAAG
>Mature_331_residues
TSPSDSVTKSPLRVGVIGAGVMGTNHGRVLAGLPGVTLVGIVDPLDEHRNRAVELIGCKTFATVDELLLAGVDAVTIAAP
THLHHEIALTCLGRGIHSLVEKPIASTVAEGREIVAAARKAGVTLMVGHVERFNPAVAAIKQAIRNEDILSIGITRVGPF
PPRMSNVGVVIDLAVHDIDLIRWFTDSEITEVQPQLSSAIAEREDIALLQFRTASGVLAHINTNWLTPFKARTVTVATRG
KYVMGDLLTRQVTECFGFKADGSYSMRHLPVGHDEPLRAELIAFLNAVRSNGVPAVTGEEGVASLEIAIQCLEQPPKVAA
GGRKEPLRAAG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=237, Percent_Identity=25.3164556962025, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787574, Length=189, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787307, Length=182, Percent_Identity=29.6703296703297, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35273; Mature: 35142

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPSDSVTKSPLRVGVIGAGVMGTNHGRVLAGLPGVTLVGIVDPLDEHRNRAVELIGCK
CCCCCCCCCCCCEEEEEEECCEEECCCCEEEECCCCEEEEEEECCHHHHCCCEEEEEECH
TFATVDELLLAGVDAVTIAAPTHLHHEIALTCLGRGIHSLVEKPIASTVAEGREIVAAAR
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGVTLMVGHVERFNPAVAAIKQAIRNEDILSIGITRVGPFPPRMSNVGVVIDLAVHDID
HCCEEEEECCHHHCCHHHHHHHHHHCCCCEEEEECEECCCCCCCCCCCCEEEEEEECCEE
LIRWFTDSEITEVQPQLSSAIAEREDIALLQFRTASGVLAHINTNWLTPFKARTVTVATR
EEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC
GKYVMGDLLTRQVTECFGFKADGSYSMRHLPVGHDEPLRAELIAFLNAVRSNGVPAVTGE
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
EGVASLEIAIQCLEQPPKVAAGGRKEPLRAAG
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPSDSVTKSPLRVGVIGAGVMGTNHGRVLAGLPGVTLVGIVDPLDEHRNRAVELIGCK
CCCCCCCCCCCEEEEEEECCEEECCCCEEEECCCCEEEEEEECCHHHHCCCEEEEEECH
TFATVDELLLAGVDAVTIAAPTHLHHEIALTCLGRGIHSLVEKPIASTVAEGREIVAAAR
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGVTLMVGHVERFNPAVAAIKQAIRNEDILSIGITRVGPFPPRMSNVGVVIDLAVHDID
HCCEEEEECCHHHCCHHHHHHHHHHCCCCEEEEECEECCCCCCCCCCCCEEEEEEECCEE
LIRWFTDSEITEVQPQLSSAIAEREDIALLQFRTASGVLAHINTNWLTPFKARTVTVATR
EEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC
GKYVMGDLLTRQVTECFGFKADGSYSMRHLPVGHDEPLRAELIAFLNAVRSNGVPAVTGE
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
EGVASLEIAIQCLEQPPKVAAGGRKEPLRAAG
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]