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The map label for this gene is epsC [H]

Identifier: 86748729

GI number: 86748729

Start: 1807772

End: 1809727

Strand: Direct

Name: epsC [H]

Synonym: RPB_1604

Alternate gene names: 86748729

Gene position: 1807772-1809727 (Clockwise)

Preceding gene: 86748728

Following gene: 86748732

Centisome position: 33.91

GC content: 62.01

Gene sequence:

>1956_bases
ATGCTGACTGGGATCCGTTCATTTTCGTATCGCAACTGGATGATCGCAATTCACGACGCCGTTGCGACCGCGGTTGCGGT
TCTGCTGAGTTTTTTCCTGCGCTTCGACGGCGAAAATCTGCTGGACCGGCTGCCGTTGCTGCTCTGGATACTGCCTTACT
TCGTCGTCTTCAGTTTTTTCGTTTGTTACGCCTTTCAGCTGACCACGACGAAATGGCGATTCATCTCGATTCCCGATCTG
CTCAACATCATACGGGCGGCAAGCGTTCTCACGCTTGCGCTGCTCGTGATGGACTACATCTTCCTCGCCCCGAACGTTTA
CGGTTCCTTCTTCCTGGGCAAGACGACCATCGTCATCTATTGGGTGCTCGAGGTCTTCCTTCTGTCCGGCTCGCGGATCG
CGTATCGCTATTTCCGCTACACGCGCACGCGCAACAAGGCCCACCAGTTGGACGCCGCGCCGGCGGTGCTGATCGGCCGT
GCTGCCGACGCCGAGGTGCTGTTGCGCGGGATCGAAAGCGGCGCCGTCAAGCGGTTGTGGCCGGTCGGGATCCTTTCGCC
CGCCAGATCGGATCGAGGGCAAACCATCCGCGGAATCCCCGTGCTGGGCGGGATCGACGATCTGCCCAACGTGGTCGAGG
ACTTCGCTCATCGCAAGCGGCCGATCGAGCGCGTGGTGATGACGCCGTCGGCATTCGAGGCCGACGCCAAGCCGGAAGCG
GTGCTGATGCGGGCACGCAAGCTGGGGCTCGCCGTCAGCCGTCTTCCATCGCTGGGGGAAAGTCGGGACACCCCCCGCCT
CTCGCCGGTGGCGGTGGAGGATCTGCTGCTGCGGCCCAGCGTCGATATCGACTATGGTCGGCTCGAGAATCTGCTCAACG
GCAAATCCATCGTCGTCACCGGCGGTGGCGGCTCGATCGGATTGGAGATGTGCGATCGGGTGACCACCTTCGGAGCCGCG
CGCCTTCTCGTGATCGAGAACTCGGAGCCGGCCCTGTACGCGGCGATGGAGGCGCTCTCCACCAAGATCACCAAGACCAA
GATCGACGGCCATATCGCCGACATTCGCGATCGCGCGCGGATCTTTCAGCTCATCATCGAATTCCAGCCGGATCTGGTCT
TTCACGCCGCGGCGCTGAAGCACGTCCCGATCCTCGAACGCGACTGGGGTGAAGGCGTCAAGACCAACATCTTCGGCTCG
GTGAATGTCGCGGATGCGGCACGCGCCGCCAACGCCCAAGCGATGGTGATGATCTCGACCGACAAGGCGATCGAGCCGGT
GTCGATGCTGGGTCTCACCAAACGATTCGCCGAATTGTACTGCCAGGGAATCGATCGTGAACTCTCCGGCGCCGCGGGCG
ACGAGCCGGCGATGCGCCTGATCTCCGTGCGCTTCGGAAACGTCCTGGCATCGAACGGCTCGGTGGTACCGAAGTTCAAG
GCGCAGATCGAAGCCGGCGGGCCGGTGACGGTGACGCATCCCGACATGGTGCGTTACTTCATGACGATCCGCGAAGCCTG
CGATCTGGTGATTACCGCCGCCACCCACGCGCTGAATCCGCAACATGCCGACGCTTCGGTATTCGTTCTGAGCATGGGGC
AGCCGGTGAAGATCGTCGATCTCGCGGATCGGATGATCCGGCTGTCCGGCCTGCAACCGGGCTACGACATCGACATCGTC
TTCACCGGCGTGAGGCCGGGCGAGCGGATGCACGAGATCCTGTTCGCCGAGCACGAATCCTTCATCGAGATCGGGCTTCC
CGGTGTGGTCGCCGCACGACCGAAGGAATTGCCATTGAAGACGCTGCGGCAATGGCTGACCGAACTTGAGAAGGCCACAA
CCGAAGGGCGCTACGACTGCGTCGTTGCCATTCTCAAGGACGCGGTTCCGGAGTATCAGGCCGGCGACGCCGCCCAGGAC
CAGAACAGCAGTGCGTCAGGCAAGTTAGCTTTGTGA

Upstream 100 bases:

>100_bases
CTGATCGACGTGCTGCCGGGTTTCAGCACGACCTCGCTGGTCGAGAAGGCACGCGAGGGGACGTCGTGAACAATCTCAGG
TTCCAATCGGGGAATAGTCG

Downstream 100 bases:

>100_bases
TCGCCGCGGCCGGGCAAAGCGAGTGAGCAGAACCGCCACGAGACCGACTCCGCAGACCAGCGCGACAGCGTCCGCGGCCG
GCGACGACAGGACGACAGAG

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MLTGIRSFSYRNWMIAIHDAVATAVAVLLSFFLRFDGENLLDRLPLLLWILPYFVVFSFFVCYAFQLTTTKWRFISIPDL
LNIIRAASVLTLALLVMDYIFLAPNVYGSFFLGKTTIVIYWVLEVFLLSGSRIAYRYFRYTRTRNKAHQLDAAPAVLIGR
AADAEVLLRGIESGAVKRLWPVGILSPARSDRGQTIRGIPVLGGIDDLPNVVEDFAHRKRPIERVVMTPSAFEADAKPEA
VLMRARKLGLAVSRLPSLGESRDTPRLSPVAVEDLLLRPSVDIDYGRLENLLNGKSIVVTGGGGSIGLEMCDRVTTFGAA
RLLVIENSEPALYAAMEALSTKITKTKIDGHIADIRDRARIFQLIIEFQPDLVFHAAALKHVPILERDWGEGVKTNIFGS
VNVADAARAANAQAMVMISTDKAIEPVSMLGLTKRFAELYCQGIDRELSGAAGDEPAMRLISVRFGNVLASNGSVVPKFK
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALNPQHADASVFVLSMGQPVKIVDLADRMIRLSGLQPGYDIDIV
FTGVRPGERMHEILFAEHESFIEIGLPGVVAARPKELPLKTLRQWLTELEKATTEGRYDCVVAILKDAVPEYQAGDAAQD
QNSSASGKLAL

Sequences:

>Translated_651_residues
MLTGIRSFSYRNWMIAIHDAVATAVAVLLSFFLRFDGENLLDRLPLLLWILPYFVVFSFFVCYAFQLTTTKWRFISIPDL
LNIIRAASVLTLALLVMDYIFLAPNVYGSFFLGKTTIVIYWVLEVFLLSGSRIAYRYFRYTRTRNKAHQLDAAPAVLIGR
AADAEVLLRGIESGAVKRLWPVGILSPARSDRGQTIRGIPVLGGIDDLPNVVEDFAHRKRPIERVVMTPSAFEADAKPEA
VLMRARKLGLAVSRLPSLGESRDTPRLSPVAVEDLLLRPSVDIDYGRLENLLNGKSIVVTGGGGSIGLEMCDRVTTFGAA
RLLVIENSEPALYAAMEALSTKITKTKIDGHIADIRDRARIFQLIIEFQPDLVFHAAALKHVPILERDWGEGVKTNIFGS
VNVADAARAANAQAMVMISTDKAIEPVSMLGLTKRFAELYCQGIDRELSGAAGDEPAMRLISVRFGNVLASNGSVVPKFK
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALNPQHADASVFVLSMGQPVKIVDLADRMIRLSGLQPGYDIDIV
FTGVRPGERMHEILFAEHESFIEIGLPGVVAARPKELPLKTLRQWLTELEKATTEGRYDCVVAILKDAVPEYQAGDAAQD
QNSSASGKLAL
>Mature_651_residues
MLTGIRSFSYRNWMIAIHDAVATAVAVLLSFFLRFDGENLLDRLPLLLWILPYFVVFSFFVCYAFQLTTTKWRFISIPDL
LNIIRAASVLTLALLVMDYIFLAPNVYGSFFLGKTTIVIYWVLEVFLLSGSRIAYRYFRYTRTRNKAHQLDAAPAVLIGR
AADAEVLLRGIESGAVKRLWPVGILSPARSDRGQTIRGIPVLGGIDDLPNVVEDFAHRKRPIERVVMTPSAFEADAKPEA
VLMRARKLGLAVSRLPSLGESRDTPRLSPVAVEDLLLRPSVDIDYGRLENLLNGKSIVVTGGGGSIGLEMCDRVTTFGAA
RLLVIENSEPALYAAMEALSTKITKTKIDGHIADIRDRARIFQLIIEFQPDLVFHAAALKHVPILERDWGEGVKTNIFGS
VNVADAARAANAQAMVMISTDKAIEPVSMLGLTKRFAELYCQGIDRELSGAAGDEPAMRLISVRFGNVLASNGSVVPKFK
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALNPQHADASVFVLSMGQPVKIVDLADRMIRLSGLQPGYDIDIV
FTGVRPGERMHEILFAEHESFIEIGLPGVVAARPKELPLKTLRQWLTELEKATTEGRYDCVVAILKDAVPEYQAGDAAQD
QNSSASGKLAL

Specific function: Involved in biofilm formation [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 71563; Mature: 71563

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGIRSFSYRNWMIAIHDAVATAVAVLLSFFLRFDGENLLDRLPLLLWILPYFVVFSFF
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VCYAFQLTTTKWRFISIPDLLNIIRAASVLTLALLVMDYIFLAPNVYGSFFLGKTTIVIY
HHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WVLEVFLLSGSRIAYRYFRYTRTRNKAHQLDAAPAVLIGRAADAEVLLRGIESGAVKRLW
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHC
PVGILSPARSDRGQTIRGIPVLGGIDDLPNVVEDFAHRKRPIERVVMTPSAFEADAKPEA
CCCCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCHHH
VLMRARKLGLAVSRLPSLGESRDTPRLSPVAVEDLLLRPSVDIDYGRLENLLNGKSIVVT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEE
GGGGSIGLEMCDRVTTFGAARLLVIENSEPALYAAMEALSTKITKTKIDGHIADIRDRAR
CCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFQLIIEFQPDLVFHAAALKHVPILERDWGEGVKTNIFGSVNVADAARAANAQAMVMIST
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC
DKAIEPVSMLGLTKRFAELYCQGIDRELSGAAGDEPAMRLISVRFGNVLASNGSVVPKFK
CCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCEEECCCCCCCCHH
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALNPQHADASVFVLSMGQPVKIVD
EEEECCCCEEECCHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCEEEEEECCCCEEHHH
LADRMIRLSGLQPGYDIDIVFTGVRPGERMHEILFAEHESFIEIGLPGVVAARPKELPLK
HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHH
TLRQWLTELEKATTEGRYDCVVAILKDAVPEYQAGDAAQDQNSSASGKLAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTGIRSFSYRNWMIAIHDAVATAVAVLLSFFLRFDGENLLDRLPLLLWILPYFVVFSFF
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VCYAFQLTTTKWRFISIPDLLNIIRAASVLTLALLVMDYIFLAPNVYGSFFLGKTTIVIY
HHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WVLEVFLLSGSRIAYRYFRYTRTRNKAHQLDAAPAVLIGRAADAEVLLRGIESGAVKRLW
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHC
PVGILSPARSDRGQTIRGIPVLGGIDDLPNVVEDFAHRKRPIERVVMTPSAFEADAKPEA
CCCCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCHHH
VLMRARKLGLAVSRLPSLGESRDTPRLSPVAVEDLLLRPSVDIDYGRLENLLNGKSIVVT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEE
GGGGSIGLEMCDRVTTFGAARLLVIENSEPALYAAMEALSTKITKTKIDGHIADIRDRAR
CCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFQLIIEFQPDLVFHAAALKHVPILERDWGEGVKTNIFGSVNVADAARAANAQAMVMIST
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC
DKAIEPVSMLGLTKRFAELYCQGIDRELSGAAGDEPAMRLISVRFGNVLASNGSVVPKFK
CCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCEEECCCCCCCCHH
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALNPQHADASVFVLSMGQPVKIVD
EEEECCCCEEECCHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCEEEEEECCCCEEHHH
LADRMIRLSGLQPGYDIDIVFTGVRPGERMHEILFAEHESFIEIGLPGVVAARPKELPLK
HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHH
TLRQWLTELEKATTEGRYDCVVAILKDAVPEYQAGDAAQDQNSSASGKLAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]