Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is wcaE [C]

Identifier: 86748668

GI number: 86748668

Start: 1739152

End: 1739895

Strand: Direct

Name: wcaE [C]

Synonym: RPB_1543

Alternate gene names: 86748668

Gene position: 1739152-1739895 (Clockwise)

Preceding gene: 86748666

Following gene: 86748669

Centisome position: 32.62

GC content: 58.87

Gene sequence:

>744_bases
ATGCGCGATCCTGGTCAAGCGCCTAGCCTTTCGATCGTGACGGTGACGTACAACAGCGCGGCCACCCTGTCCGACACTCT
GAACAGTGTTCGCAGCCAGACCTTCCGAGACTTCGAGCATATCGTCGTCGATGGCGGATCGACGGACGGGACGCTCGACA
TTCTGAACGCCGCGGGCTCTTCGGTGCGCTGGATTTCCGAACCCGACAAGGGCATCTACGATGCGATGAACAAGGGCATC
GGGATGGCGCGTGGCCGCTGGATTCATCTGCTCAATTCGGACGATTACTACGCGTCGGACGATGTGCTGGCCCGCATCGT
TCCGAAGCTGAAAGAGGATGCAGTCAACTATTGTGACCTCATTCGGGCCGACGCAAATGGTGGACGAGTCGTCCAGCGCT
TCCCGTTCCGAAAATGGCCGCTGTATTTTTCGGCTTACTTGCCGCATCCGTCTCTCGTCGTCTCGGCGGCTCAGTACGGG
GCGGTCGGAACTTACGACGTCGGCTTCCGGGTCGCCGCCGACCACGATATGATTTTGCGACTGGTCGACCGCTTTCCTGC
CAACCATATCCCGGTCGAAATGACCGTGATGCGTCAGGACGGAGTGTCGGCGACCAATCTGGATCTGAGCATGCGGGAGT
TCGGGATGGTGTTGCAGAAGCACCGGCTTCCCGAACCGCTGATCACGGCCATCATGGCGATCCGACGGATTTGGTGGAGG
TTGAGATCCAATGAACGATCCTAA

Upstream 100 bases:

>100_bases
AGGCCCGCGACCGAAGCATATCGGATGTTGCTGCTGCCCGACAGAACGAGTATAGCGCTGCAAGGGAATTTGGGCCAAGC
AGTGGACACGAAAAGAATCG

Downstream 100 bases:

>100_bases
CAGCTTGGCAATTCGCGATGGTGTCAGCAAGAGGATCGTCGATCTCTTCCCCGACAAGCATGCCCGCATCGCCGATCTCG
GTTGTGGCGAAGGTGAGTTA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI
GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG
AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR
LRSNERS

Sequences:

>Translated_247_residues
MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI
GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG
AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR
LRSNERS
>Mature_247_residues
MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGSSVRWISEPDKGIYDAMNKGI
GMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDLIRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYG
AVGTYDVGFRVAADHDMILRLVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR
LRSNERS

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=205, Percent_Identity=31.7073170731707, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27702; Mature: 27702

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGS
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC
SVRWISEPDKGIYDAMNKGIGMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDL
CEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYGAVGTYDVGFRVAADHDMILR
EEECCCCCEEEEECCCCCCCEEEEEECCCHHHEEEHHHHCCCEEECCCEEEECCHHHHHH
LVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR
HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRSNERS
HHCCCCC
>Mature Secondary Structure
MRDPGQAPSLSIVTVTYNSAATLSDTLNSVRSQTFRDFEHIVVDGGSTDGTLDILNAAGS
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC
SVRWISEPDKGIYDAMNKGIGMARGRWIHLLNSDDYYASDDVLARIVPKLKEDAVNYCDL
CEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRADANGGRVVQRFPFRKWPLYFSAYLPHPSLVVSAAQYGAVGTYDVGFRVAADHDMILR
EEECCCCCEEEEECCCCCCCEEEEEECCCHHHEEEHHHHCCCEEECCCEEEECCHHHHHH
LVDRFPANHIPVEMTVMRQDGVSATNLDLSMREFGMVLQKHRLPEPLITAIMAIRRIWWR
HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRSNERS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]