| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yfiQ [H]
Identifier: 86748496
GI number: 86748496
Start: 1562644
End: 1565367
Strand: Direct
Name: yfiQ [H]
Synonym: RPB_1371
Alternate gene names: 86748496
Gene position: 1562644-1565367 (Clockwise)
Preceding gene: 86748495
Following gene: 86748498
Centisome position: 29.31
GC content: 67.22
Gene sequence:
>2724_bases ATGTCGACTTATCGATTGAGCAATCTCCTGGCACCTGCCGCGGTGGCGGTGATCGGTGCCAGCCCGCGGCCGGCATCGCT CGGACGGGCGGTGCTCGACAATCTGCGCAGCGCCGGCTTCAAGGGCGAAATCGGCGTCGTCAATCCGCGCTATCCCGAGA TCGGCGGCTTCAAGACCGTCCGCTCGCTCGGTGAGTTGGCGTTCGTACCCGACCTCATCGTCATCACCGCGCCGTCGCGA ACGGTCGCGAAGATCATTACCGAAGCCGGCGAGCGCGGCGTCGCCGGGGCGATCATCATCAGCGCCGAGATGGGCCGCGG CCAGGGATCGTATGCCGACGCCGCCAATCGCGCCGCGCGCAAATCGGGGATTCGGCTGATCGGCCCGAACTGCCTCGGCA TCATGGTGCCGGGTTCCAATCTCAACGCCAGCTTCGCGGCGCATATGCCACGTCGAGGCCATCTGGCGCTGATCTCGCAG TCCGGCGCCATCGCGGCCGGCATGGTCGACTGGGCCGCCGTCAAGAACATCGGATTTTCCGGGATCGTGTCGATCGGAGA TCAGCTCGACGTCGACATCGCCGACATGCTGGACTACTACGCCGGCGATATCGAGACCCGCGCCATCCTGCTCTACATCG AAGCGGTGACCGACGCCCGCAAGTTCATGTCTGCGGCGCGCGCAGCGGCACGCGTGAAGCCGGTGGTGGTGGTGAAGTCG GGGCGCATGGCGCATGGCGCCTTGGCGGCCGCGACCCACACCGGCGCACTGGCCGGCGCCGATGCCGTGTACGGCGCCGC GTTCCGTCGTGCCGGCATGCTGCGAGTGTTCGACCTGCGCGAATTGTTCGATTGCGCCGAAACGCTCGGGCGCGTCAGCG CGCCGCGCGGCAAACGGGTTGCGATCCTCACCAATGGCGGCGGCATCGGCGTGCTGGCGGTCGATCGGCTGGCCGAACTC GGCGGCATCCCGGCGACGCTGTCGAAGGCCGTGTGCGACAAGCTCGATGCCGTGCTGCCGCCGACCTGGTCGGGTTCGAA CCCGATCGACATCACCGGCGACGCCGACGCGGAGCGGTACGCCGTGGCGCTGTCGATCCTGCTGGCCGACCCCGAGAACG ATGCGATCCTGGTGATGAATGTGCAAACCGCGATGGCGTCGTCCGCGGAGATCGCCAAGGCGGTGATCCGGGTGGTCGGC GAGGAGCGCGTTCGCCGCAGTTTCTTCAAGCCGGTATTTGCGGTCTGGGTCGGCGCCGACGACGCGGTGACGAAGGCGTT CGACGCCGCCTCGATTCCCAACTATCCGACCGAGGACGACGCGGTTCGCAGCATCATCAATCTGGTGCGCTATCGCGAGG CCGCGCAACTCTTGACGGAGGTGCCGCCGAGCCTGCCCAAGGAGTTCGATCCGGACACCGAAGCGGCGCGTGCGGTGGTC GAGAAGGCGCTGGCCGAGGGTCGCTCCTGGCTCGATCCGATCGAGGTCGGCGCGCTGTTCGCCGCCTATCAGATCCCGAT GGTGCCGACGCTGGCCGCGGTCGATGCCGATGCCGCGGTGGCGTGGGCGGAGCCGTTCCTGGCGCAGGGCGTCACCGTGG TGGTCAAGGTGATGTCGCGCGACATCACCCACAAATCCGACGTCGGCGGCGTGGTGCTCAACCTCACCAGCGCCGAAGCG GTCCGCACGGCCGTCGGCGAGATTCTCGCCCGTGCCGCGAAGTTGCGGCCGAAGGCGCGGCTCGACGGCGTGATGGTGCA GCCGATGATTATGCGCCGCAAGGCGCGTGAATTGACCGTCGGCATCGCCGACGATCCGACCTTCGGGCCGGTGATCGTCT TCGGCCACGGCGGCACCGGCGTCGAGATCATCGACGACCGCGCGCTGGCGCTGCCGCCGCTCGATCTGCCGCTCGCCTGT TCGCTGATCGCGCGCACGAGGGTCTCGAAGCTGTTGCAGGCCTATCGCGATGTCCCGGCGGTGAAGGACGGCGCGGTGGC GCTGACGCTGGTCAAGCTGTCGCAGATGGCGGCGGACCTGCCGGAGATCCACGAGCTCGACATCAATCCGCTACTGGCCG ACGAGAATGGCGTGGTGGTGATCGACGCGCGCGTCGTTGTGCGCAAGGCGATGCGCAAATTCGCGGGTCTCGGCAACGCC ACCTTCGCGGTGAAGCCGTATCCGTCCGAGTGGGAGCGCCATTTGGTCGTAAAGGACGGCTGGCGCGTGCTGGCCCGGCC GCTTCGGCCCGACGACGAGCCGGCGATTCATGAGTTTCTCACCCACGTCACGTCCGAAGATCTGCGGCTGCGGTTCTTTG CGGCGATGAAGGAGTTCAGCCACGCCTTCATCGCGCGGCTGACGCAGATCGACTACGCCCGGGCGATGGCCTTCATCGCG CTCGACGAGGCGACCGGCGAAACCCTCGGCGTGGTGCGGATTCACTCGGACTCGATCTACGAGAGCGGCGAATACGCCAT CCTGTTGCGCTCCGACCTGAAAGGCAAGGGCCTCGGCTGGGCGTTGATGAAGTTGATCATCGAGTATGCACGCGCCGAAG GGCTGAAATTCGTCTGCGGTCAGGTGCTGCGGGAGAACACCGCGATGCTGCGGATGTGCCGCCAGCTCGGCTTCGAGGCC AAGACCGATCACTCCGAGCCCGACATCCTCAACGTGACGCTGCCGCTGAGCGACGAGTCCGCCCGCGCCGCTGCGAAGGC GTGA
Upstream 100 bases:
>100_bases CGGTTGGAAACGCCGCTGCATTTGTACTACAAGGCTGCGTGCAGACTCGGTTCGATGCAGCGTTGGACATCGGCCGCTGG TTGCCCGGTGCCGAGGTGAG
Downstream 100 bases:
>100_bases GCGCACCTGTCGGTCGGTCGGGACCGACCTGTTCGATCGGTGAAAGCGTCTACAGCCGGCTCACCGACACGACGCGGAAC GTATGCATATCGCCTTCCTC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 906
Protein sequence:
>907_residues MSTYRLSNLLAPAAVAVIGASPRPASLGRAVLDNLRSAGFKGEIGVVNPRYPEIGGFKTVRSLGELAFVPDLIVITAPSR TVAKIITEAGERGVAGAIIISAEMGRGQGSYADAANRAARKSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQ SGAIAAGMVDWAAVKNIGFSGIVSIGDQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKS GRMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDCAETLGRVSAPRGKRVAILTNGGGIGVLAVDRLAEL GGIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAERYAVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVG EERVRRSFFKPVFAVWVGADDAVTKAFDAASIPNYPTEDDAVRSIINLVRYREAAQLLTEVPPSLPKEFDPDTEAARAVV EKALAEGRSWLDPIEVGALFAAYQIPMVPTLAAVDADAAVAWAEPFLAQGVTVVVKVMSRDITHKSDVGGVVLNLTSAEA VRTAVGEILARAAKLRPKARLDGVMVQPMIMRRKARELTVGIADDPTFGPVIVFGHGGTGVEIIDDRALALPPLDLPLAC SLIARTRVSKLLQAYRDVPAVKDGAVALTLVKLSQMAADLPEIHELDINPLLADENGVVVIDARVVVRKAMRKFAGLGNA TFAVKPYPSEWERHLVVKDGWRVLARPLRPDDEPAIHEFLTHVTSEDLRLRFFAAMKEFSHAFIARLTQIDYARAMAFIA LDEATGETLGVVRIHSDSIYESGEYAILLRSDLKGKGLGWALMKLIIEYARAEGLKFVCGQVLRENTAMLRMCRQLGFEA KTDHSEPDILNVTLPLSDESARAAAKA
Sequences:
>Translated_907_residues MSTYRLSNLLAPAAVAVIGASPRPASLGRAVLDNLRSAGFKGEIGVVNPRYPEIGGFKTVRSLGELAFVPDLIVITAPSR TVAKIITEAGERGVAGAIIISAEMGRGQGSYADAANRAARKSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQ SGAIAAGMVDWAAVKNIGFSGIVSIGDQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKS GRMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDCAETLGRVSAPRGKRVAILTNGGGIGVLAVDRLAEL GGIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAERYAVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVG EERVRRSFFKPVFAVWVGADDAVTKAFDAASIPNYPTEDDAVRSIINLVRYREAAQLLTEVPPSLPKEFDPDTEAARAVV EKALAEGRSWLDPIEVGALFAAYQIPMVPTLAAVDADAAVAWAEPFLAQGVTVVVKVMSRDITHKSDVGGVVLNLTSAEA VRTAVGEILARAAKLRPKARLDGVMVQPMIMRRKARELTVGIADDPTFGPVIVFGHGGTGVEIIDDRALALPPLDLPLAC SLIARTRVSKLLQAYRDVPAVKDGAVALTLVKLSQMAADLPEIHELDINPLLADENGVVVIDARVVVRKAMRKFAGLGNA TFAVKPYPSEWERHLVVKDGWRVLARPLRPDDEPAIHEFLTHVTSEDLRLRFFAAMKEFSHAFIARLTQIDYARAMAFIA LDEATGETLGVVRIHSDSIYESGEYAILLRSDLKGKGLGWALMKLIIEYARAEGLKFVCGQVLRENTAMLRMCRQLGFEA KTDHSEPDILNVTLPLSDESARAAAKA >Mature_906_residues STYRLSNLLAPAAVAVIGASPRPASLGRAVLDNLRSAGFKGEIGVVNPRYPEIGGFKTVRSLGELAFVPDLIVITAPSRT VAKIITEAGERGVAGAIIISAEMGRGQGSYADAANRAARKSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQS GAIAAGMVDWAAVKNIGFSGIVSIGDQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKSG RMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDCAETLGRVSAPRGKRVAILTNGGGIGVLAVDRLAELG GIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAERYAVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVGE ERVRRSFFKPVFAVWVGADDAVTKAFDAASIPNYPTEDDAVRSIINLVRYREAAQLLTEVPPSLPKEFDPDTEAARAVVE KALAEGRSWLDPIEVGALFAAYQIPMVPTLAAVDADAAVAWAEPFLAQGVTVVVKVMSRDITHKSDVGGVVLNLTSAEAV RTAVGEILARAAKLRPKARLDGVMVQPMIMRRKARELTVGIADDPTFGPVIVFGHGGTGVEIIDDRALALPPLDLPLACS LIARTRVSKLLQAYRDVPAVKDGAVALTLVKLSQMAADLPEIHELDINPLLADENGVVVIDARVVVRKAMRKFAGLGNAT FAVKPYPSEWERHLVVKDGWRVLARPLRPDDEPAIHEFLTHVTSEDLRLRFFAAMKEFSHAFIARLTQIDYARAMAFIAL DEATGETLGVVRIHSDSIYESGEYAILLRSDLKGKGLGWALMKLIIEYARAEGLKFVCGQVLRENTAMLRMCRQLGFEAK TDHSEPDILNVTLPLSDESARAAAKA
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=903, Percent_Identity=38.6489479512735, Blast_Score=569, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 96717; Mature: 96586
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYRLSNLLAPAAVAVIGASPRPASLGRAVLDNLRSAGFKGEIGVVNPRYPEIGGFKTV CCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH RSLGELAFVPDLIVITAPSRTVAKIITEAGERGVAGAIIISAEMGRGQGSYADAANRAAR HHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH KSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQSGAIAAGMVDWAAVKNIGFS HCCCEEECCCEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHCCCH GIVSIGDQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKS HHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEC GRMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDCAETLGRVSAPRGKRV CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCEE AILTNGGGIGVLAVDRLAELGGIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAERY EEEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHH AVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVGEERVRRSFFKPVFAVWVGAD EEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DAVTKAFDAASIPNYPTEDDAVRSIINLVRYREAAQLLTEVPPSLPKEFDPDTEAARAVV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH EKALAEGRSWLDPIEVGALFAAYQIPMVPTLAAVDADAAVAWAEPFLAQGVTVVVKVMSR HHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH DITHKSDVGGVVLNLTSAEAVRTAVGEILARAAKLRPKARLDGVMVQPMIMRRKARELTV CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCEEECHHHHHHHHHHEEE GIADDPTFGPVIVFGHGGTGVEIIDDRALALPPLDLPLACSLIARTRVSKLLQAYRDVPA EECCCCCCCCEEEEECCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC VKDGAVALTLVKLSQMAADLPEIHELDINPLLADENGVVVIDARVVVRKAMRKFAGLGNA CCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCCC TFAVKPYPSEWERHLVVKDGWRVLARPLRPDDEPAIHEFLTHVTSEDLRLRFFAAMKEFS EEEECCCCCCHHCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH HAFIARLTQIDYARAMAFIALDEATGETLGVVRIHSDSIYESGEYAILLRSDLKGKGLGW HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCHHH ALMKLIIEYARAEGLKFVCGQVLRENTAMLRMCRQLGFEAKTDHSEPDILNVTLPLSDES HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC ARAAAKA CHHHCCC >Mature Secondary Structure STYRLSNLLAPAAVAVIGASPRPASLGRAVLDNLRSAGFKGEIGVVNPRYPEIGGFKTV CCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH RSLGELAFVPDLIVITAPSRTVAKIITEAGERGVAGAIIISAEMGRGQGSYADAANRAAR HHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH KSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQSGAIAAGMVDWAAVKNIGFS HCCCEEECCCEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHCCCH GIVSIGDQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKS HHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEC GRMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDCAETLGRVSAPRGKRV CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCEE AILTNGGGIGVLAVDRLAELGGIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAERY EEEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHH AVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVGEERVRRSFFKPVFAVWVGAD EEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DAVTKAFDAASIPNYPTEDDAVRSIINLVRYREAAQLLTEVPPSLPKEFDPDTEAARAVV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH EKALAEGRSWLDPIEVGALFAAYQIPMVPTLAAVDADAAVAWAEPFLAQGVTVVVKVMSR HHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH DITHKSDVGGVVLNLTSAEAVRTAVGEILARAAKLRPKARLDGVMVQPMIMRRKARELTV CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCEEECHHHHHHHHHHEEE GIADDPTFGPVIVFGHGGTGVEIIDDRALALPPLDLPLACSLIARTRVSKLLQAYRDVPA EECCCCCCCCEEEEECCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC VKDGAVALTLVKLSQMAADLPEIHELDINPLLADENGVVVIDARVVVRKAMRKFAGLGNA CCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCCC TFAVKPYPSEWERHLVVKDGWRVLARPLRPDDEPAIHEFLTHVTSEDLRLRFFAAMKEFS EEEECCCCCCHHCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH HAFIARLTQIDYARAMAFIALDEATGETLGVVRIHSDSIYESGEYAILLRSDLKGKGLGW HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCHHH ALMKLIIEYARAEGLKFVCGQVLRENTAMLRMCRQLGFEAKTDHSEPDILNVTLPLSDES HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC ARAAAKA CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]