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The map label for this gene is yrbE [C]

Identifier: 86748498

GI number: 86748498

Start: 1565999

End: 1567135

Strand: Direct

Name: yrbE [C]

Synonym: RPB_1373

Alternate gene names: 86748498

Gene position: 1565999-1567135 (Clockwise)

Preceding gene: 86748496

Following gene: 86748499

Centisome position: 29.37

GC content: 65.08

Gene sequence:

>1137_bases
GTGAGTTCAGTGCCGGTCTTGAATGCGGTCACTCAGGGCGACGTGCTGCGGCTGCATCCCGGCGGCGCCTGGATCGCCAT
GCACACCGCCGTGCTGGAGCGGCTGTTCGACGGCGTCGCGTCGCAAGTCGCTGCCGCAAAGGCACTCGAGATCGACATGA
CCGATGTGGTCGAGATCGACACGATCGGCGCCTGGCTGCTGGAGAAAGTGTCGCGCGACGCCGCGCAGGCCGGCCGCACC
GCGCAGTTCGTCGGCGTCGCCGATCGCTATGCCGGGCTGATCGAGGAAGTTCGGCAGGTCAACCGTCGCGGGCCAAAACC
ACGGCCCAGCGTCAATCCGATCATCGCCCGGCTCGACCAGATCGGCCGCTCGGCGTGGAGCGCCACGCAGGACATCTCGG
TGTTTCTCGCCATGCTCGGTGCGCTGGGTGTCGCGCTGCTCGGCGTGCTGCGGCGGCCCCGCTCGCTGCGACTGACATCC
CTGACTTACCAGGTCTATCGCGTCGGCTGGCAGGCGATTCCGATCGTCGTGCTGATCACTTTCCTGATCGGCGCGATCAT
CGCCCAGCAGGGCATCTTCCACTTCCGCAAATTCGGTGCGGAATCCTACGTCGTCGACATGGTCGGCATCCTCGTGCTGC
GCGAGATCGGCGTGCTGATCGTCGCCATCATGGTCGCCGGCCGCTCCGGCAGTGCCTATACGGCCGAACTCGGCTCGATG
AAGATGCGCGAGGAGATCGACGCGCTGACCACGATGGGGCTGGATCCTGTCGAGGTGCTGATTCTGCCGCGCATCATCGC
GCTGGTGATCGCGCTGCCGATCCTGACTTTCATCGGATCGATGGCGGCGCTGTACGGCGGATTGCTGACCGCGTGGTTCT
ACGGCGGCATGCAGCCGGCGGTGTATATCGCCCGGCTGCACGAGGCGGTGTCGCTCAACAGTTTCGAGGTCGGGATCTGG
AAGGCGCCGTTCATGGCGCTGGTGATCGGTATCGTCGCCTGCAGCGAGGGGCTTCGTGTCAAAGGCAGCGCCGAATCGCT
CGGCCTGCAGACCACCACCTCGGTGGTGAAGTCGATCTTTCTGGTGATCGTGCTCGACGGGCTGTTCGCCGTGTTCTTCG
CTTCGATCGGGATGTAG

Upstream 100 bases:

>100_bases
ATCGCATGTTGCGACGCAAGCTGCGCGCGCGAAGCGGCGGCGGCCGATGGAATAGGACGAGGACTTCGATGACGGCGTTG
ACGACGGATTGGGAGCGGAC

Downstream 100 bases:

>100_bases
CCATGGACGCGCTCGCCGATCTCTACGCCATCCGCGTCGCCGATCTCGTGGTCGGCTTCGGCCATCAGACGGTACTCGAT
CATTTGTCGCTCGACGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSSVPVLNAVTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEKVSRDAAQAGRT
AQFVGVADRYAGLIEEVRQVNRRGPKPRPSVNPIIARLDQIGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLRLTS
LTYQVYRVGWQAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSM
KMREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIW
KAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGM

Sequences:

>Translated_378_residues
MSSVPVLNAVTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEKVSRDAAQAGRT
AQFVGVADRYAGLIEEVRQVNRRGPKPRPSVNPIIARLDQIGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLRLTS
LTYQVYRVGWQAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSM
KMREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIW
KAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGM
>Mature_377_residues
SSVPVLNAVTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEKVSRDAAQAGRTA
QFVGVADRYAGLIEEVRQVNRRGPKPRPSVNPIIARLDQIGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLRLTSL
TYQVYRVGWQAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMK
MREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIWK
APFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGM

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=207, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40577; Mature: 40445

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50801 STAS ; PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSVPVLNAVTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEID
CCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TIGAWLLEKVSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRGPKPRPSVNPIIARLDQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLRLTSLTYQVYRVGWQAIPIVVLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KMREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VYIARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIF
HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCEECCCHHHCCCHHHHHHHHHHH
LVIVLDGLFAVFFASIGM
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA