Click here to switch to the map view.

The map label for this gene is 86748457

Identifier: 86748457

GI number: 86748457

Start: 1520022

End: 1520240

Strand: Reverse

Name: 86748457

Synonym: RPB_1332

Alternate gene names: NA

Gene position: 1520240-1520022 (Counterclockwise)

Preceding gene: 86748458

Following gene: 86748454

Centisome position: 28.51

GC content: 69.86

Gene sequence:

>219_bases
ATGACCGCCACCGACCAGCCGAAATTCGATCCCGCTTACGTCGCCACACTGCGCGAGGTGCTCGATATCGCGGTCGCGCA
GATCGCGACGGAGCATCGCACGCCGGCCACCAAGGCGATGATGGCGCAGATCATCGTGCAGAACGCCGCGCGCGGCGTCA
CCGATGCGCGCACGCTGGTGCACGACGCCGTGCTCGCCGGCGCCGACGGCGCGCCGTAG

Upstream 100 bases:

>100_bases
ACCGAAATATCACGACGCGTCACCGCAACTTCATCCAGGCGACCCACTTGAGCCGCATTGCATCGGCAAACGATGCGGAC
TGCAAAGAAGGAGACCCTCG

Downstream 100 bases:

>100_bases
CGCCGCCGCATTCTGCTTTCGGACATTCTCTCCACGCGCCGCGATTTTCGCGGCGCGTTTTGATTCGGGGGGCAAGCCGG
GGTAAGGGGGCGTTTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTATDQPKFDPAYVATLREVLDIAVAQIATEHRTPATKAMMAQIIVQNAARGVTDARTLVHDAVLAGADGAP

Sequences:

>Translated_72_residues
MTATDQPKFDPAYVATLREVLDIAVAQIATEHRTPATKAMMAQIIVQNAARGVTDARTLVHDAVLAGADGAP
>Mature_71_residues
TATDQPKFDPAYVATLREVLDIAVAQIATEHRTPATKAMMAQIIVQNAARGVTDARTLVHDAVLAGADGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7558; Mature: 7427

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATDQPKFDPAYVATLREVLDIAVAQIATEHRTPATKAMMAQIIVQNAARGVTDARTLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
HDAVLAGADGAP
HHHHHHCCCCCC
>Mature Secondary Structure 
TATDQPKFDPAYVATLREVLDIAVAQIATEHRTPATKAMMAQIIVQNAARGVTDARTLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
HDAVLAGADGAP
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA