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The map label for this gene is 86748458

Identifier: 86748458

GI number: 86748458

Start: 1520290

End: 1520691

Strand: Reverse

Name: 86748458

Synonym: RPB_1333

Alternate gene names: NA

Gene position: 1520691-1520290 (Counterclockwise)

Preceding gene: 86748459

Following gene: 86748457

Centisome position: 28.52

GC content: 65.17

Gene sequence:

>402_bases
GTGCGTTGTGGCAAACTCACGACGGCGCGACCATGTGTGCCCCGCGCGACGCAGGCCGCGCCCGGCCGATCGGCTGATGA
TCGGCGGCGGGACTCGGGGGACGCGCACCGTGTCCGCCGCACGCGCACGACACGCCCGCGGCGGCGATGGCGTGCAGCCG
GGACACACCGCGAGTCCGATTCCTCGTCATCGCGACGATCGCTGTCACCACACGGTCATCGCCACGGCCGCATCCGCGCG
ATCTGGAATTTCTCCAGCAGCACGATCCGTGATCCATCGATTCCGATTCACGAATCACCCTGTGCCGCAGCCACTTCTCC
GATACATGAAGAAACCGTCACGATCGCCATCACCGAAATATCACGACGCGTCACCGCAACTTCATCCAGGCGACCCACTT
GA

Upstream 100 bases:

>100_bases
CGGCCCCGGCCGCTGCTCCGGCCGCCAAGAAGTAAGCTCACTTACTTCCACCGACTAGCCGACGCCCGTCGAGGACCCTG
GGGGGACCTCGGCGGGCGTT

Downstream 100 bases:

>100_bases
GCCGCATTGCATCGGCAAACGATGCGGACTGCAAAGAAGGAGACCCTCGATGACCGCCACCGACCAGCCGAAATTCGATC
CCGCTTACGTCGCCACACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRCGKLTTARPCVPRATQAAPGRSADDRRRDSGDAHRVRRTRTTRPRRRWRAAGTHRESDSSSSRRSLSPHGHRHGRIRA
IWNFSSSTIRDPSIPIHESPCAAATSPIHEETVTIAITEISRRVTATSSRRPT

Sequences:

>Translated_133_residues
MRCGKLTTARPCVPRATQAAPGRSADDRRRDSGDAHRVRRTRTTRPRRRWRAAGTHRESDSSSSRRSLSPHGHRHGRIRA
IWNFSSSTIRDPSIPIHESPCAAATSPIHEETVTIAITEISRRVTATSSRRPT
>Mature_133_residues
MRCGKLTTARPCVPRATQAAPGRSADDRRRDSGDAHRVRRTRTTRPRRRWRAAGTHRESDSSSSRRSLSPHGHRHGRIRA
IWNFSSSTIRDPSIPIHESPCAAATSPIHEETVTIAITEISRRVTATSSRRPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14896; Mature: 14896

Theoretical pI: Translated: 12.40; Mature: 12.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCGKLTTARPCVPRATQAAPGRSADDRRRDSGDAHRVRRTRTTRPRRRWRAAGTHRESD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCC
SSSSRRSLSPHGHRHGRIRAIWNFSSSTIRDPSIPIHESPCAAATSPIHEETVTIAITEI
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECH
SRRVTATSSRRPT
HHHHHCCCCCCCC
>Mature Secondary Structure
MRCGKLTTARPCVPRATQAAPGRSADDRRRDSGDAHRVRRTRTTRPRRRWRAAGTHRESD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCC
SSSSRRSLSPHGHRHGRIRAIWNFSSSTIRDPSIPIHESPCAAATSPIHEETVTIAITEI
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECH
SRRVTATSSRRPT
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA