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The map label for this gene is petA [H]

Identifier: 86748325

GI number: 86748325

Start: 1374287

End: 1374814

Strand: Direct

Name: petA [H]

Synonym: RPB_1200

Alternate gene names: 86748325

Gene position: 1374287-1374814 (Clockwise)

Preceding gene: 86748321

Following gene: 86748326

Centisome position: 25.78

GC content: 63.45

Gene sequence:

>528_bases
GTGACGACAGAGACTTCGGCGGAACCGACACGCCGTGATTTTCTCTACATCGCAACCGGCGCTGTGGCCGCAGTCGGCGC
AGCAGCGGCCGTGTGGCCGTTCATCGCCCAGATGAACCCGGACGCATCGACCATCGCCGCCGGTGCACCGATCGAAGTCG
ATCTGACTCCGATCGCCGAAGGGCAGGACATCAAGGTGTTCTGGCGCGGCCAGCCGATCTTCGTCATGAACCGCACGCAG
AAGCAGGTCGACGAAGCGCGTGCGGTGAAACTGTCGGCGCTGCCCGACCCGCAGACCGATGAAGAGCGCACCAAGGCAGG
CCACGAGAAGTGGCTGGTGGTCGTCGGCATCTGCACCCATCTGGGCTGCATTCCGATCGCCCATGAAGGTCTGTTCGACG
GATTCTTCTGCCCCTGCCACGGCTCGCAATACGACAGCTCCGGTCGTATCCGTCAGGGGCCCGCGCCTCTGAACCTGCCG
GTTCCGCCCTACCAATTCGTCTCCGACACCAAAATCCAGATCGGCTGA

Upstream 100 bases:

>100_bases
GATGCGTGGGCTGCGGACTTCGGCGGCTCTCCCTCGGACGATCGTTTCGCATCTTGCCGAGACCGCGACGCCGGCCGCAG
ATATGAAAGGGCTTTGGATC

Downstream 100 bases:

>100_bases
CGCCTCCCGACCAGCGTCGCTATATCCCTTGCTTAGGATCGCATCATGAGCGGACCATCGACCTATCAGCCGCAGAGCCC
CTTCATGAAGTGGCTCGAGC

Product: cytochrome b6-F complex iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTTETSAEPTRRDFLYIATGAVAAVGAAAAVWPFIAQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIFVMNRTQ
KQVDEARAVKLSALPDPQTDEERTKAGHEKWLVVVGICTHLGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQGPAPLNLP
VPPYQFVSDTKIQIG

Sequences:

>Translated_175_residues
MTTETSAEPTRRDFLYIATGAVAAVGAAAAVWPFIAQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIFVMNRTQ
KQVDEARAVKLSALPDPQTDEERTKAGHEKWLVVVGICTHLGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQGPAPLNLP
VPPYQFVSDTKIQIG
>Mature_174_residues
TTETSAEPTRRDFLYIATGAVAAVGAAAAVWPFIAQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIFVMNRTQK
QVDEARAVKLSALPDPQTDEERTKAGHEKWLVVVGICTHLGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQGPAPLNLPV
PPYQFVSDTKIQIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=179, Percent_Identity=47.4860335195531, Blast_Score=177, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17540418, Length=161, Percent_Identity=45.3416149068323, Blast_Score=151, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320811, Length=159, Percent_Identity=49.0566037735849, Blast_Score=167, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24580896, Length=142, Percent_Identity=47.1830985915493, Blast_Score=151, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 18903; Mature: 18771

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETSAEPTRRDFLYIATGAVAAVGAAAAVWPFIAQMNPDASTIAAGAPIEVDLTPIAE
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECCC
GQDIKVFWRGQPIFVMNRTQKQVDEARAVKLSALPDPQTDEERTKAGHEKWLVVVGICTH
CCEEEEEECCCEEEEECCCHHHHHHHHEEEEECCCCCCCCHHHHHCCCCEEEEEEEEHHH
LGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQGPAPLNLPVPPYQFVSDTKIQIG
CCCCEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCEEEEC
>Mature Secondary Structure 
TTETSAEPTRRDFLYIATGAVAAVGAAAAVWPFIAQMNPDASTIAAGAPIEVDLTPIAE
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECCC
GQDIKVFWRGQPIFVMNRTQKQVDEARAVKLSALPDPQTDEERTKAGHEKWLVVVGICTH
CCEEEEEECCCEEEEECCCHHHHHHHHEEEEECCCCCCCCHHHHHCCCCEEEEEEEEHHH
LGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQGPAPLNLPVPPYQFVSDTKIQIG
CCCCEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2541921; 12597275 [H]