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The map label for this gene is 86748248

Identifier: 86748248

GI number: 86748248

Start: 1292024

End: 1294384

Strand: Direct

Name: 86748248

Synonym: RPB_1123

Alternate gene names: NA

Gene position: 1292024-1294384 (Clockwise)

Preceding gene: 86748247

Following gene: 86748249

Centisome position: 24.23

GC content: 66.84

Gene sequence:

>2361_bases
ATGAACCTGCACCGCCCCGTCCACTTCAACGCTTCGCAGACTTCAGGCTCAGACATGACGATTCGAGTAACCAACACCGC
CCGCGCCAGCCGCTCCGTGCTGGAAAATTGGATGCCGGAGGTCACGCCGGTGGCGGCCGCGGATGCCGGTTCGGTCACGA
TCGACAACACCGGCCCGTTCGTCGCCGGCAGCTATCAGCGCTTCTCCATGACTTATGCGGCGGGCCGCTACGGCATCGAC
GATTCCGGCTGCCTGAAGATCTGCTACCGCTTCGCCTCCGACATGGGGCGGCCGCAATTCACCGATCCGACCGCGCCGAA
CTTCGTCGAAGTCGTCGCTTCGAACGGCGCCACGCTGGACGTGCGGTTCGACTACAAGCAGAACACGCGGCCGTGGGATC
GCACCATCTACATCAAGGTCGTCGCCGGCTTCATGAAGCAAGGCGACACCATTCGGATCGATTTCGGCGCCGACGAACGC
GGGCCGGGCATCCGGATGCAGACCTTCGTCGATCCGGAATTCTGTTTCCGCATACTGGTCGACCCGATCGCGACCTACAC
CTTCGTGGAAGTGCCGGGCGTGCCGGTGATGCCGATCATCGCCGGTCCGGCGGCGCGCTGGCACGCGGTGCTGCCGACCT
GCCGGGCGGTCGGCGATACATTCGCGCTTGGCATTCGTGCCGACGACATGTGGGGCAATCCGACCAGCGTCCGTGGCGGC
GCGCGGGTTCAACTCGTCTGCAGCGGCCGGATCGAGGGGCTGCCGGAGACGGTGGCGTTCGATCCGGCGTTGCCAGCGAC
CGAAATCGGCGGATTGCGCGCCGTTCAGCCGGGCAGCGTGTTCGTCGATCTGGTTGCCGAAGGACGCACTCTGACGCGCT
CCAATGTACTCGTCGTCGAATCCGAGCTGGCGTTGCGCCCGTATTGGGGCGACCTGCACGCGCAATCCGGCGAGACCATC
GGCTCGGGCACCGCGCAGGACTACATGACGTACGCGCGTGATTGCGCCTTCCTCGATGCGATCGGCCACCAGGGCAACGA
TTTCCAGATCACCGGGCAGTTCTGGCACCTCCTCAACGGCCTGATGCGCGACTGGAACGAGCCCGGGCGCTTCGTCACCA
TCCCCGGCTACGAATGGTCGGGCAACACCTCGCTGGGCGGCGACCGCAACGTGTTCTATCGCAGCGAGGACCGCGTCATT
CACCGCTCGTCGCACGCGCTGGTGCCGGAGCGGAGCGACGCCGACACCGACTGCTGGGACGCGCGCAGTCTGTTCGAGGC
GCTGGAGCCGAAGCAGGCCGACACCGTGGTGTGGGCGCATTGCGGCGGCCGCTATGCCGATATCAAATACGCCCATCACC
ATGGTCTGGAGCGCGCCGTCGAGGTGCATTCGAGCTGGGGGACGTTCGAATGGCTGGCCGCTGACGCCTTCGACAGCGGC
TACCGCGTCGGCATCGTCGCCAACAGCGACGGTCACAAGGGGCGGCCGGGCTACGAGCCGCCCGGCGCCTCGCTGTTCGG
CGCGCTGGGAGGCCTGACCTGTTACTGGCTGCCGGAACTGACCCGCGACGCGATGTTCGACGCGCTGCAGGCGCGGCATC
ACTACGCCACCACCGGATCGCGCGTGCACATGACGGTGCAAAGCAACTTCGCGGAGCCTGTGACGGTGTGGACCGACGAC
CCCCGCGTCGCCGGCGCAAGGCATCAAAGCGCGACCTCGGTGATGATGGGCGACATCGTCACCGGCGCGCCCGACGAGGT
CGCGTTCGAGTTCTGCATCGAGTCGGCGTCGCCGATCCTCGACGTCGAGATTCGCCGCGGCACCGAGGTGCTGGAGACCA
TACGTCCGCATGCCGCCGCGCCGCTCGGAACGCGCTGCCGCATCGAATGGAGCGGCGCCGAATATCGCGGCCGCGCCCGG
CAGACGGTGTGGGACGGTTCGTTGAAGCTCACCGGGGCGACCATCACGGCGTTCGAGCCGATCAACTTCTTCAATCCGGA
CCGGCCGCTGCGGCAGCTCTCCGAGCATGAACTGGCGTGGCAGTCGATCACCACCGGCAATTTCGCCGGCGTCGATCTGT
CGCTGTCGTCGGCCGATGCGGTGCTCGAGATCACCACCCCGCTGGGGACGTTCAAGCATGCGCTCGCCGAGCTGACGCAT
CAGCCGACCGTGCATCGGCTCGGCAAGCTCGATCGCGAGCTGCGACTGTCGCGGGAGCCGGATCACGACAGCGAACGTTC
GCTCCGCCTTCGGCGCTCGATCGCGATGCGCGCGGGCGACAATCCGATCTGGCTCCGCGCGACCTTCGCGGACGGCCACC
AGGCGTGGTCGAGCCCGATCTACATCCTACGCGACGCGTAG

Upstream 100 bases:

>100_bases
TCGCCGGCCTTTTGACGGTGATCGTCATCGGCCTGCTGGTCGACGGCCTGATCTTCCGCGCCATCGAACGCCGCACCGTG
CGGCGCTGGGGAATGCAGCG

Downstream 100 bases:

>100_bases
CGCTTCGCTTGGAAAAATACATCCGGCGCGCCTGTCGGTGTACCGGACCCGCCAGTGGAAACCGCGGCCTCGTCGCAGTG
CCGCGTGAAAGGAGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 786; Mature: 786

Protein sequence:

>786_residues
MNLHRPVHFNASQTSGSDMTIRVTNTARASRSVLENWMPEVTPVAAADAGSVTIDNTGPFVAGSYQRFSMTYAAGRYGID
DSGCLKICYRFASDMGRPQFTDPTAPNFVEVVASNGATLDVRFDYKQNTRPWDRTIYIKVVAGFMKQGDTIRIDFGADER
GPGIRMQTFVDPEFCFRILVDPIATYTFVEVPGVPVMPIIAGPAARWHAVLPTCRAVGDTFALGIRADDMWGNPTSVRGG
ARVQLVCSGRIEGLPETVAFDPALPATEIGGLRAVQPGSVFVDLVAEGRTLTRSNVLVVESELALRPYWGDLHAQSGETI
GSGTAQDYMTYARDCAFLDAIGHQGNDFQITGQFWHLLNGLMRDWNEPGRFVTIPGYEWSGNTSLGGDRNVFYRSEDRVI
HRSSHALVPERSDADTDCWDARSLFEALEPKQADTVVWAHCGGRYADIKYAHHHGLERAVEVHSSWGTFEWLAADAFDSG
YRVGIVANSDGHKGRPGYEPPGASLFGALGGLTCYWLPELTRDAMFDALQARHHYATTGSRVHMTVQSNFAEPVTVWTDD
PRVAGARHQSATSVMMGDIVTGAPDEVAFEFCIESASPILDVEIRRGTEVLETIRPHAAAPLGTRCRIEWSGAEYRGRAR
QTVWDGSLKLTGATITAFEPINFFNPDRPLRQLSEHELAWQSITTGNFAGVDLSLSSADAVLEITTPLGTFKHALAELTH
QPTVHRLGKLDRELRLSREPDHDSERSLRLRRSIAMRAGDNPIWLRATFADGHQAWSSPIYILRDA

Sequences:

>Translated_786_residues
MNLHRPVHFNASQTSGSDMTIRVTNTARASRSVLENWMPEVTPVAAADAGSVTIDNTGPFVAGSYQRFSMTYAAGRYGID
DSGCLKICYRFASDMGRPQFTDPTAPNFVEVVASNGATLDVRFDYKQNTRPWDRTIYIKVVAGFMKQGDTIRIDFGADER
GPGIRMQTFVDPEFCFRILVDPIATYTFVEVPGVPVMPIIAGPAARWHAVLPTCRAVGDTFALGIRADDMWGNPTSVRGG
ARVQLVCSGRIEGLPETVAFDPALPATEIGGLRAVQPGSVFVDLVAEGRTLTRSNVLVVESELALRPYWGDLHAQSGETI
GSGTAQDYMTYARDCAFLDAIGHQGNDFQITGQFWHLLNGLMRDWNEPGRFVTIPGYEWSGNTSLGGDRNVFYRSEDRVI
HRSSHALVPERSDADTDCWDARSLFEALEPKQADTVVWAHCGGRYADIKYAHHHGLERAVEVHSSWGTFEWLAADAFDSG
YRVGIVANSDGHKGRPGYEPPGASLFGALGGLTCYWLPELTRDAMFDALQARHHYATTGSRVHMTVQSNFAEPVTVWTDD
PRVAGARHQSATSVMMGDIVTGAPDEVAFEFCIESASPILDVEIRRGTEVLETIRPHAAAPLGTRCRIEWSGAEYRGRAR
QTVWDGSLKLTGATITAFEPINFFNPDRPLRQLSEHELAWQSITTGNFAGVDLSLSSADAVLEITTPLGTFKHALAELTH
QPTVHRLGKLDRELRLSREPDHDSERSLRLRRSIAMRAGDNPIWLRATFADGHQAWSSPIYILRDA
>Mature_786_residues
MNLHRPVHFNASQTSGSDMTIRVTNTARASRSVLENWMPEVTPVAAADAGSVTIDNTGPFVAGSYQRFSMTYAAGRYGID
DSGCLKICYRFASDMGRPQFTDPTAPNFVEVVASNGATLDVRFDYKQNTRPWDRTIYIKVVAGFMKQGDTIRIDFGADER
GPGIRMQTFVDPEFCFRILVDPIATYTFVEVPGVPVMPIIAGPAARWHAVLPTCRAVGDTFALGIRADDMWGNPTSVRGG
ARVQLVCSGRIEGLPETVAFDPALPATEIGGLRAVQPGSVFVDLVAEGRTLTRSNVLVVESELALRPYWGDLHAQSGETI
GSGTAQDYMTYARDCAFLDAIGHQGNDFQITGQFWHLLNGLMRDWNEPGRFVTIPGYEWSGNTSLGGDRNVFYRSEDRVI
HRSSHALVPERSDADTDCWDARSLFEALEPKQADTVVWAHCGGRYADIKYAHHHGLERAVEVHSSWGTFEWLAADAFDSG
YRVGIVANSDGHKGRPGYEPPGASLFGALGGLTCYWLPELTRDAMFDALQARHHYATTGSRVHMTVQSNFAEPVTVWTDD
PRVAGARHQSATSVMMGDIVTGAPDEVAFEFCIESASPILDVEIRRGTEVLETIRPHAAAPLGTRCRIEWSGAEYRGRAR
QTVWDGSLKLTGATITAFEPINFFNPDRPLRQLSEHELAWQSITTGNFAGVDLSLSSADAVLEITTPLGTFKHALAELTH
QPTVHRLGKLDRELRLSREPDHDSERSLRLRRSIAMRAGDNPIWLRATFADGHQAWSSPIYILRDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86594; Mature: 86594

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLHRPVHFNASQTSGSDMTIRVTNTARASRSVLENWMPEVTPVAAADAGSVTIDNTGPF
CCCCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCE
VAGSYQRFSMTYAAGRYGIDDSGCLKICYRFASDMGRPQFTDPTAPNFVEVVASNGATLD
EECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEE
VRFDYKQNTRPWDRTIYIKVVAGFMKQGDTIRIDFGADERGPGIRMQTFVDPEFCFRILV
EEECCCCCCCCCCCEEEEEEHHHHHHCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
DPIATYTFVEVPGVPVMPIIAGPAARWHAVLPTCRAVGDTFALGIRADDMWGNPTSVRGG
HHHHHEEEEECCCCCEEHEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC
ARVQLVCSGRIEGLPETVAFDPALPATEIGGLRAVQPGSVFVDLVAEGRTLTRSNVLVVE
CEEEEEECCCCCCCCCCEEECCCCCCHHCCCEEEECCCCEEEEEEECCCEEECCCEEEEE
SELALRPYWGDLHAQSGETIGSGTAQDYMTYARDCAFLDAIGHQGNDFQITGQFWHLLNG
CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
LMRDWNEPGRFVTIPGYEWSGNTSLGGDRNVFYRSEDRVIHRSSHALVPERSDADTDCWD
HHHHCCCCCCEEEECCEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHH
ARSLFEALEPKQADTVVWAHCGGRYADIKYAHHHGLERAVEVHSSWGTFEWLAADAFDSG
HHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHCHHHHHHHHCCCCCEEEEEECCCCCC
YRVGIVANSDGHKGRPGYEPPGASLFGALGGLTCYWLPELTRDAMFDALQARHHYATTGS
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHEECCCC
RVHMTVQSNFAEPVTVWTDDPRVAGARHQSATSVMMGDIVTGAPDEVAFEFCIESASPIL
EEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHEEECHHCCCCCHHHHHHHHHHCCCCEE
DVEIRRGTEVLETIRPHAAAPLGTRCRIEWSGAEYRGRARQTVWDGSLKLTGATITAFEP
EEEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEEEECC
INFFNPDRPLRQLSEHELAWQSITTGNFAGVDLSLSSADAVLEITTPLGTFKHALAELTH
CCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
QPTVHRLGKLDRELRLSREPDHDSERSLRLRRSIAMRAGDNPIWLRATFADGHQAWSSPI
CCHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCCCE
YILRDA
EEEECC
>Mature Secondary Structure
MNLHRPVHFNASQTSGSDMTIRVTNTARASRSVLENWMPEVTPVAAADAGSVTIDNTGPF
CCCCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCE
VAGSYQRFSMTYAAGRYGIDDSGCLKICYRFASDMGRPQFTDPTAPNFVEVVASNGATLD
EECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEE
VRFDYKQNTRPWDRTIYIKVVAGFMKQGDTIRIDFGADERGPGIRMQTFVDPEFCFRILV
EEECCCCCCCCCCCEEEEEEHHHHHHCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
DPIATYTFVEVPGVPVMPIIAGPAARWHAVLPTCRAVGDTFALGIRADDMWGNPTSVRGG
HHHHHEEEEECCCCCEEHEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC
ARVQLVCSGRIEGLPETVAFDPALPATEIGGLRAVQPGSVFVDLVAEGRTLTRSNVLVVE
CEEEEEECCCCCCCCCCEEECCCCCCHHCCCEEEECCCCEEEEEEECCCEEECCCEEEEE
SELALRPYWGDLHAQSGETIGSGTAQDYMTYARDCAFLDAIGHQGNDFQITGQFWHLLNG
CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
LMRDWNEPGRFVTIPGYEWSGNTSLGGDRNVFYRSEDRVIHRSSHALVPERSDADTDCWD
HHHHCCCCCCEEEECCEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHH
ARSLFEALEPKQADTVVWAHCGGRYADIKYAHHHGLERAVEVHSSWGTFEWLAADAFDSG
HHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHCHHHHHHHHCCCCCEEEEEECCCCCC
YRVGIVANSDGHKGRPGYEPPGASLFGALGGLTCYWLPELTRDAMFDALQARHHYATTGS
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHEECCCC
RVHMTVQSNFAEPVTVWTDDPRVAGARHQSATSVMMGDIVTGAPDEVAFEFCIESASPIL
EEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHEEECHHCCCCCHHHHHHHHHHCCCCEE
DVEIRRGTEVLETIRPHAAAPLGTRCRIEWSGAEYRGRARQTVWDGSLKLTGATITAFEP
EEEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEEEECC
INFFNPDRPLRQLSEHELAWQSITTGNFAGVDLSLSSADAVLEITTPLGTFKHALAELTH
CCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
QPTVHRLGKLDRELRLSREPDHDSERSLRLRRSIAMRAGDNPIWLRATFADGHQAWSSPI
CCHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCCCE
YILRDA
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA