| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is tauC [C]
Identifier: 86748247
GI number: 86748247
Start: 1291143
End: 1292027
Strand: Direct
Name: tauC [C]
Synonym: RPB_1122
Alternate gene names: 86748247
Gene position: 1291143-1292027 (Clockwise)
Preceding gene: 86748246
Following gene: 86748248
Centisome position: 24.22
GC content: 65.42
Gene sequence:
>885_bases ATGACTGAGATGTCCAGAACAGCGCTCGCGCCCCGGCCGAATGTGTATCGCCAGCCGGACGCGAACGACGCCAAGACCGG CGAGATCACCAAGCAATTGCCGTTGTTCGAGCGGCTGCGCAGCAACACCCTGTTTCGGCGCGGGTCCATCCTGGTTCTGC TCGCGGCTGCCTGGCAGGGCTACGCGATGGTCCTGCAGAACGATCTGCTGCTGCCGAGCTTCTGGGCTTCCCTGACCGCG TTGTACGACGCCTTCGTGCACGGGCCGCTGCTGTGGCGGATGCTGTATTCGATCCAGGTGCTGCTCACCGGCTACGTCAT CGGCGCCGTGCTCGCCGGCGTGCTGGTGTCGCTGGCGGTCTCGACCCAATGGGGCAGCGATCTGCTCGCGACGCTGACCG CGATGCTCAATCCGCTGCCGGCGATCGCGCTGCTGCCGCTAGCGCTGTTATGGTTCGGCCTCGGCATGTCGAGCATGGTG TTCGTCATCGTGCATTCGGTGCTGTGGGCGGTGGCGCTCAACGCGCAGACCGGCTTCCAGTCGGTGAGCGAAACGCTGCG CATGGCCGGGCACAATTTCGGCCTGCGCAACATGCGCTACATCTTCGGCATCCTGGTTCCGGCGGCGTTTCCGTCGATCC TCAACGGCCTGAAGATCGGCTGGGCCTTCGCATGGCGCACGCTGATCGCCGCCGAGCTGGTGTTCGGCGCGACCTCGCGC TCCGGCGGCATCGGCTGGTTCATCTTCGAGAACCGCAACTCGCTGGAAACCGCCAACGTGTTCGCCGGCCTTTTGACGGT GATCGTCATCGGCCTGCTGGTCGACGGCCTGATCTTCCGCGCCATCGAACGCCGCACCGTGCGGCGCTGGGGAATGCAGC GATGA
Upstream 100 bases:
>100_bases GCCAGCGGTCTCGGCCCGGACGCCGTGTCCACGCGGAAATTCCAGGATCTGCAGCGCGAGATCGAAGACATGCTGTTCAA CCGCACCGGAGATCGCGCCG
Downstream 100 bases:
>100_bases ACCTGCACCGCCCCGTCCACTTCAACGCTTCGCAGACTTCAGGCTCAGACATGACGATTCGAGTAACCAACACCGCCCGC GCCAGCCGCTCCGTGCTGGA
Product: binding-protein dependent transport system inner membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTEMSRTALAPRPNVYRQPDANDAKTGEITKQLPLFERLRSNTLFRRGSILVLLAAAWQGYAMVLQNDLLLPSFWASLTA LYDAFVHGPLLWRMLYSIQVLLTGYVIGAVLAGVLVSLAVSTQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSMV FVIVHSVLWAVALNAQTGFQSVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWAFAWRTLIAAELVFGATSR SGGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFRAIERRTVRRWGMQR
Sequences:
>Translated_294_residues MTEMSRTALAPRPNVYRQPDANDAKTGEITKQLPLFERLRSNTLFRRGSILVLLAAAWQGYAMVLQNDLLLPSFWASLTA LYDAFVHGPLLWRMLYSIQVLLTGYVIGAVLAGVLVSLAVSTQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSMV FVIVHSVLWAVALNAQTGFQSVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWAFAWRTLIAAELVFGATSR SGGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFRAIERRTVRRWGMQR >Mature_293_residues TEMSRTALAPRPNVYRQPDANDAKTGEITKQLPLFERLRSNTLFRRGSILVLLAAAWQGYAMVLQNDLLLPSFWASLTAL YDAFVHGPLLWRMLYSIQVLLTGYVIGAVLAGVLVSLAVSTQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSMVF VIVHSVLWAVALNAQTGFQSVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWAFAWRTLIAAELVFGATSRS GGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFRAIERRTVRRWGMQR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=245, Percent_Identity=30.6122448979592, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI87081802, Length=206, Percent_Identity=29.6116504854369, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32397; Mature: 32266
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMSRTALAPRPNVYRQPDANDAKTGEITKQLPLFERLRSNTLFRRGSILVLLAAAWQG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH YAMVLQNDLLLPSFWASLTALYDAFVHGPLLWRMLYSIQVLLTGYVIGAVLAGVLVSLAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSMVFVIVHSVLWAVALNAQTGFQ HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH SVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWAFAWRTLIAAELVFGATSR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFRAIERRTVRRWGMQR CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TEMSRTALAPRPNVYRQPDANDAKTGEITKQLPLFERLRSNTLFRRGSILVLLAAAWQG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH YAMVLQNDLLLPSFWASLTALYDAFVHGPLLWRMLYSIQVLLTGYVIGAVLAGVLVSLAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STQWGSDLLATLTAMLNPLPAIALLPLALLWFGLGMSSMVFVIVHSVLWAVALNAQTGFQ HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH SVSETLRMAGHNFGLRNMRYIFGILVPAAFPSILNGLKIGWAFAWRTLIAAELVFGATSR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGGIGWFIFENRNSLETANVFAGLLTVIVIGLLVDGLIFRAIERRTVRRWGMQR CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]