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The map label for this gene is yhdH [H]

Identifier: 86748233

GI number: 86748233

Start: 1275793

End: 1276779

Strand: Direct

Name: yhdH [H]

Synonym: RPB_1108

Alternate gene names: 86748233

Gene position: 1275793-1276779 (Clockwise)

Preceding gene: 86748229

Following gene: 86748234

Centisome position: 23.93

GC content: 67.58

Gene sequence:

>987_bases
ATGGCGACGTTCAGGGCGATCAGGATCGACAAGGCCGACAAGGGCACCACTGCGGCGCTGACCCAGTTCGACGAGTCCGA
ACTGATGGATGGCGACGTGACGGTCGCGGTCGAATGGTCGACGCTGAACTACAAGGACGGCCTGGCGCTGACCGGCAAGG
CGCCGGTGGTGCGGCGGTTTCCGATGATCGCCGGCATCGATTTCGCCGGCACCGTTCTCGACTCCACGCATCCGGACTGG
AAGCCCGGCGACAAGGTCGTCTGCAACGGCTGGGGCATGGGCGAAACCCATCTCGGCGCCTATGCGGAAAAAGCCCGCGT
CAAGGGCGACTGGCTGGTGCGGCTGCCGGACGGGCTGTCCGCGCGCGACGCGATGGCGATCGGCACAGCGGGCTACACCG
CGATGCTCAGCGTGCTGGCGCTGGAGAAGCACGGTCTGACGCCGAAGGACGGCCCGGTGGTCGTTACCGGCGCCGCCGGC
GGCGTCGGCTCGGTGGCGATCGCGCTGTTGTCGAAGCTCGGCTATCACGTCATCGCCTCGACCGGCCGCACCTCGGAAGA
GGCCTATCTGCGCGACCTCGGCGCCGCCGAGATCATCGACCGCAATGAACTGTCCGGCCCCGCCAAGCCGCTCGCCAAGG
AGCGCTGGGCCGGCGGCATCGACAGCGTCGGCTCGACCACGCTGGCGAACCTCCTGTCGATGACCAAGTACCGCGGCGCG
ATCGCCGCCTGCGGACTCGCCGCCGGCATGGACCTTCCCGGTTCAGTGGCCCCGTTTATTTTGCGCGGGGTGTGTCTTTA
TGGCATCGATTCGGTGATGTGCCCGCTGCCGGACCGCAAACAGGCCTGGTCGCGGCTCGCCGGCGACCTCGACCGGGCCA
AATTGGCGGAAATCACCCGGGAAATTCCCCTCGACGAGGTGATCGGCGCCGGCGCCAAAGTGCTGGCCGGCCAGGTCCGC
GGTCGAATCGTGGTGAAAATTGCGTAG

Upstream 100 bases:

>100_bases
ATCGGATTTGCATCGCTGCAGCGCAGCGTGATCTTTACAGCGGGGCCGCATTTTCTCTAACTCACGTCGGCGTTCGAAAG
CACAAAACAAGGGGAGCGGA

Downstream 100 bases:

>100_bases
CTGTTCAGACTTTACCAACCAAGCTGCGCCAATGTTGCCGCAGTTTGTATGGTAAGGAGCGGGTTAACGAGTCCGACCCG
CGCCAGTAGGAGTTCAGGCA

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MATFRAIRIDKADKGTTAALTQFDESELMDGDVTVAVEWSTLNYKDGLALTGKAPVVRRFPMIAGIDFAGTVLDSTHPDW
KPGDKVVCNGWGMGETHLGAYAEKARVKGDWLVRLPDGLSARDAMAIGTAGYTAMLSVLALEKHGLTPKDGPVVVTGAAG
GVGSVAIALLSKLGYHVIASTGRTSEEAYLRDLGAAEIIDRNELSGPAKPLAKERWAGGIDSVGSTTLANLLSMTKYRGA
IAACGLAAGMDLPGSVAPFILRGVCLYGIDSVMCPLPDRKQAWSRLAGDLDRAKLAEITREIPLDEVIGAGAKVLAGQVR
GRIVVKIA

Sequences:

>Translated_328_residues
MATFRAIRIDKADKGTTAALTQFDESELMDGDVTVAVEWSTLNYKDGLALTGKAPVVRRFPMIAGIDFAGTVLDSTHPDW
KPGDKVVCNGWGMGETHLGAYAEKARVKGDWLVRLPDGLSARDAMAIGTAGYTAMLSVLALEKHGLTPKDGPVVVTGAAG
GVGSVAIALLSKLGYHVIASTGRTSEEAYLRDLGAAEIIDRNELSGPAKPLAKERWAGGIDSVGSTTLANLLSMTKYRGA
IAACGLAAGMDLPGSVAPFILRGVCLYGIDSVMCPLPDRKQAWSRLAGDLDRAKLAEITREIPLDEVIGAGAKVLAGQVR
GRIVVKIA
>Mature_327_residues
ATFRAIRIDKADKGTTAALTQFDESELMDGDVTVAVEWSTLNYKDGLALTGKAPVVRRFPMIAGIDFAGTVLDSTHPDWK
PGDKVVCNGWGMGETHLGAYAEKARVKGDWLVRLPDGLSARDAMAIGTAGYTAMLSVLALEKHGLTPKDGPVVVTGAAGG
VGSVAIALLSKLGYHVIASTGRTSEEAYLRDLGAAEIIDRNELSGPAKPLAKERWAGGIDSVGSTTLANLLSMTKYRGAI
AACGLAAGMDLPGSVAPFILRGVCLYGIDSVMCPLPDRKQAWSRLAGDLDRAKLAEITREIPLDEVIGAGAKVLAGQVRG
RIVVKIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=324, Percent_Identity=52.4691358024691, Blast_Score=345, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34386; Mature: 34255

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFRAIRIDKADKGTTAALTQFDESELMDGDVTVAVEWSTLNYKDGLALTGKAPVVRRF
CCCEEEEEECCCCCCCCHHHHHCCHHHCCCCCEEEEEEEEEECCCCCEEEECCCCHHHHC
PMIAGIDFAGTVLDSTHPDWKPGDKVVCNGWGMGETHLGAYAEKARVKGDWLVRLPDGLS
CHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
ARDAMAIGTAGYTAMLSVLALEKHGLTPKDGPVVVTGAAGGVGSVAIALLSKLGYHVIAS
CCHHHEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
TGRTSEEAYLRDLGAAEIIDRNELSGPAKPLAKERWAGGIDSVGSTTLANLLSMTKYRGA
CCCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IAACGLAAGMDLPGSVAPFILRGVCLYGIDSVMCPLPDRKQAWSRLAGDLDRAKLAEITR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH
EIPLDEVIGAGAKVLAGQVRGRIVVKIA
HCCHHHHHCCCHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
ATFRAIRIDKADKGTTAALTQFDESELMDGDVTVAVEWSTLNYKDGLALTGKAPVVRRF
CCEEEEEECCCCCCCCHHHHHCCHHHCCCCCEEEEEEEEEECCCCCEEEECCCCHHHHC
PMIAGIDFAGTVLDSTHPDWKPGDKVVCNGWGMGETHLGAYAEKARVKGDWLVRLPDGLS
CHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
ARDAMAIGTAGYTAMLSVLALEKHGLTPKDGPVVVTGAAGGVGSVAIALLSKLGYHVIAS
CCHHHEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
TGRTSEEAYLRDLGAAEIIDRNELSGPAKPLAKERWAGGIDSVGSTTLANLLSMTKYRGA
CCCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IAACGLAAGMDLPGSVAPFILRGVCLYGIDSVMCPLPDRKQAWSRLAGDLDRAKLAEITR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH
EIPLDEVIGAGAKVLAGQVRGRIVVKIA
HCCHHHHHCCCHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]