Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747867

Identifier: 86747867

GI number: 86747867

Start: 833510

End: 834052

Strand: Reverse

Name: 86747867

Synonym: RPB_0741

Alternate gene names: NA

Gene position: 834052-833510 (Counterclockwise)

Preceding gene: 86747871

Following gene: 86747866

Centisome position: 15.64

GC content: 72.38

Gene sequence:

>543_bases
GTGCACCGGACGGAAAGCAGGGCGGTGGCGCCATTCGCCACCCCGCGCGATCCGACAAAGCTCGAAGCCGCAAGGCGTGC
CGAGAGCGAGGGCATGAATTTCAGCCCGGACGACAGACCTACCACCGCGCAAGGCGTTGAACCAACCGACGCACCGGCCT
GCCCCACCGGGCCGGTGATGATCAGCGTTTGCACCAGTTGCAAGGCTTCCGACGGCGGCAACGCCGGCGCGCCGCTGCTC
GACGCGATCCGGGCCGCGCTCGGCGCCGCCGCCGATCTGCAGGTGCGGCCGGTGCAGTGCCTCGGCGTCTGCAAGCGCCC
GGCCACCGTCGCGGTGTCGAGCGCAGACGGCTACAGCTTCCTGTTCGGCGATCTTTTGCCCGACAGCGGCGCCGAGGCGG
TCGCCGCCTTCGCCGCCGCCTATCGGGACAGCGATTTCGGCCTGGTGCCGTGGCGGCAGCGCGCCGAGGTGCTGCGCAAG
GGCATGGTGGCGCGGCTGCCGCCGCTGCGCTGGTCGCCCGCCGACGGGCGCGCCCCGTCATGA

Upstream 100 bases:

>100_bases
GATTCCTCTAAGGACTCCTGGGAAGGCGGCGACAAGGGCAGCGACTCGCGAGCCAGGAGACCTGCCATCGCGAATTGTGC
TTTGGCGGCGTCGGGGCGGG

Downstream 100 bases:

>100_bases
CCACACTCCTCTCCACGCTGGTGCTCGGCGGCGCGCGCTCCGGCAAATCGGTGTTCGGCGAAAAGCTGGTCGCCGACAGC
AGCCTTTCGAAGATCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHRTESRAVAPFATPRDPTKLEAARRAESEGMNFSPDDRPTTAQGVEPTDAPACPTGPVMISVCTSCKASDGGNAGAPLL
DAIRAALGAAADLQVRPVQCLGVCKRPATVAVSSADGYSFLFGDLLPDSGAEAVAAFAAAYRDSDFGLVPWRQRAEVLRK
GMVARLPPLRWSPADGRAPS

Sequences:

>Translated_180_residues
MHRTESRAVAPFATPRDPTKLEAARRAESEGMNFSPDDRPTTAQGVEPTDAPACPTGPVMISVCTSCKASDGGNAGAPLL
DAIRAALGAAADLQVRPVQCLGVCKRPATVAVSSADGYSFLFGDLLPDSGAEAVAAFAAAYRDSDFGLVPWRQRAEVLRK
GMVARLPPLRWSPADGRAPS
>Mature_180_residues
MHRTESRAVAPFATPRDPTKLEAARRAESEGMNFSPDDRPTTAQGVEPTDAPACPTGPVMISVCTSCKASDGGNAGAPLL
DAIRAALGAAADLQVRPVQCLGVCKRPATVAVSSADGYSFLFGDLLPDSGAEAVAAFAAAYRDSDFGLVPWRQRAEVLRK
GMVARLPPLRWSPADGRAPS

Specific function: Unknown

COG id: COG5469

COG function: function code S; Predicted metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18779; Mature: 18779

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTESRAVAPFATPRDPTKLEAARRAESEGMNFSPDDRPTTAQGVEPTDAPACPTGPVM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ISVCTSCKASDGGNAGAPLLDAIRAALGAAADLQVRPVQCLGVCKRPATVAVSSADGYSF
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCEEEEECCCCCEE
LFGDLLPDSGAEAVAAFAAAYRDSDFGLVPWRQRAEVLRKGMVARLPPLRWSPADGRAPS
EHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRTESRAVAPFATPRDPTKLEAARRAESEGMNFSPDDRPTTAQGVEPTDAPACPTGPVM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ISVCTSCKASDGGNAGAPLLDAIRAALGAAADLQVRPVQCLGVCKRPATVAVSSADGYSF
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCEEEEECCCCCEE
LFGDLLPDSGAEAVAAFAAAYRDSDFGLVPWRQRAEVLRKGMVARLPPLRWSPADGRAPS
EHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA