| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cobP [H]
Identifier: 86747866
GI number: 86747866
Start: 832989
End: 833513
Strand: Reverse
Name: cobP [H]
Synonym: RPB_0740
Alternate gene names: 86747866
Gene position: 833513-832989 (Counterclockwise)
Preceding gene: 86747867
Following gene: 86747865
Centisome position: 15.63
GC content: 69.33
Gene sequence:
>525_bases ATGACCACACTCCTCTCCACGCTGGTGCTCGGCGGCGCGCGCTCCGGCAAATCGGTGTTCGGCGAAAAGCTGGTCGCCGA CAGCAGCCTTTCGAAGATCTATCTCGCCACCGCGACCCGCAGCGACGACGAGATGACCCAGCGCATCGCGCATCATCGTT CTCGCCGCGGTGACGGCTGGACCACGATCGAGGAGCCGCTGGCGCTGGTCGATGCGCTGACCCGCGAGGCCGGCCGCGGC CGCGCCGTGCTGGTCGACTGCCTGACGCTGTGGCTGTTCAACCTGATGGAAGCCGGCCGCGATCCCGAGGTCGAGGCCAA GCGGCTGACGCGTTTTCTCGGCGTCGCCGCCGCGCCGATCGTGCTGGTCTCCAACGAGGTCGGGCTCGGTCTCGTGCCGG AAACCCCGCTCGGCCGCGCCTTTCGCGATGCCCAGGGCCGGCTCAACCAGACCATCGCCGCCGCCGTCCCCCATGTCGTG TTCGTCGCAGCCGGCCTGCCGCTGTGGCTGAAGCAGGAGAGCTGA
Upstream 100 bases:
>100_bases GCCTGGTGCCGTGGCGGCAGCGCGCCGAGGTGCTGCGCAAGGGCATGGTGGCGCGGCTGCCGCCGCTGCGCTGGTCGCCC GCCGACGGGCGCGCCCCGTC
Downstream 100 bases:
>100_bases TCATGTCCGCCCGTGTCCCCGTCACCGTGCTCACCGGCTTTCTCGGCGCCGGCAAGACCACGCTGCTGCGCGCGCTGCTC AATCAGTCGAGCGGCCGCCG
Product: cobalbumin biosynthesis enzyme
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTTLLSTLVLGGARSGKSVFGEKLVADSSLSKIYLATATRSDDEMTQRIAHHRSRRGDGWTTIEEPLALVDALTREAGRG RAVLVDCLTLWLFNLMEAGRDPEVEAKRLTRFLGVAAAPIVLVSNEVGLGLVPETPLGRAFRDAQGRLNQTIAAAVPHVV FVAAGLPLWLKQES
Sequences:
>Translated_174_residues MTTLLSTLVLGGARSGKSVFGEKLVADSSLSKIYLATATRSDDEMTQRIAHHRSRRGDGWTTIEEPLALVDALTREAGRG RAVLVDCLTLWLFNLMEAGRDPEVEAKRLTRFLGVAAAPIVLVSNEVGLGLVPETPLGRAFRDAQGRLNQTIAAAVPHVV FVAAGLPLWLKQES >Mature_173_residues TTLLSTLVLGGARSGKSVFGEKLVADSSLSKIYLATATRSDDEMTQRIAHHRSRRGDGWTTIEEPLALVDALTREAGRGR AVLVDCLTLWLFNLMEAGRDPEVEAKRLTRFLGVAAAPIVLVSNEVGLGLVPETPLGRAFRDAQGRLNQTIAAAVPHVVF VAAGLPLWLKQES
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=182, Percent_Identity=38.4615384615385, Blast_Score=114, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 18758; Mature: 18627
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLSTLVLGGARSGKSVFGEKLVADSSLSKIYLATATRSDDEMTQRIAHHRSRRGDGW CHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC TTIEEPLALVDALTREAGRGRAVLVDCLTLWLFNLMEAGRDPEVEAKRLTRFLGVAAAPI CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCE VLVSNEVGLGLVPETPLGRAFRDAQGRLNQTIAAAVPHVVFVAAGLPLWLKQES EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure TTLLSTLVLGGARSGKSVFGEKLVADSSLSKIYLATATRSDDEMTQRIAHHRSRRGDGW HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC TTIEEPLALVDALTREAGRGRAVLVDCLTLWLFNLMEAGRDPEVEAKRLTRFLGVAAAPI CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCE VLVSNEVGLGLVPETPLGRAFRDAQGRLNQTIAAAVPHVVFVAAGLPLWLKQES EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]