| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747871
Identifier: 86747871
GI number: 86747871
Start: 836595
End: 837149
Strand: Reverse
Name: 86747871
Synonym: RPB_0745
Alternate gene names: NA
Gene position: 837149-836595 (Counterclockwise)
Preceding gene: 86747872
Following gene: 86747867
Centisome position: 15.7
GC content: 69.91
Gene sequence:
>555_bases ATGGTGCAGATCACCCGCGACTTCGACAATCCCGGCCGCGCCAATGCGGCGCTCGACGACCTCAGATCGCAAGGCTTCAA CACCGCCGAGCTCGCATCCGGACCGGACGGGCGCGGCAAGACGACGCTGCGGATAGAGCCGCCCTTCGGCACCGCGGTGC GCGTCGAGCAGATCCTCGATCGTCATGCCAATGGTGCGCCGGCGACGGCGCCGCGCGCGACGACTCCGGTGACCGCGCCG CAGCCCGCCGGGGTCGTGGTGGCGCCGAAACCGCCGCAGCCACCTTCGCCTTCTGCGTCATCGGCTCAGCCCGCCGGCCG GGCTTCGGCGAAGCGCGAGACCGACACCGCCGTGACGGCCGGATCGGAGGCGCCAAAGTCCGCCACGTCGACTCGCAACG GCACTACCACCGGAACGAAGAGCGGCCCGCGCACGCTGTCGCAGCTACTCGGCATTCCGGAACTGATCGATTCCGATACG TTCTTTTCCGGCTTCCCGCTGTTGATCCGGCCGACGCCGAAGCGGCCGGATCAGCCGCCGGCGAAGCCGAGCTGA
Upstream 100 bases:
>100_bases CCTGCGGCGTCATTCCCGCGACGGAACCGGCTCCGCCGCGGAACGACCCGCCTAGCGCGTTGTTCTTCCCGCCGACGATC CCCGATCCAAGGTAGTGAAG
Downstream 100 bases:
>100_bases TCGGCCCGGTCGCCGCGCGTCGCGCAGGTTCGGCTCAGTCGGATTTTTCCGACGTCCGGGTGCTGTTGCGGCGCGAAGCG GCGGCGCTGGCGCCGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MVQITRDFDNPGRANAALDDLRSQGFNTAELASGPDGRGKTTLRIEPPFGTAVRVEQILDRHANGAPATAPRATTPVTAP QPAGVVVAPKPPQPPSPSASSAQPAGRASAKRETDTAVTAGSEAPKSATSTRNGTTTGTKSGPRTLSQLLGIPELIDSDT FFSGFPLLIRPTPKRPDQPPAKPS
Sequences:
>Translated_184_residues MVQITRDFDNPGRANAALDDLRSQGFNTAELASGPDGRGKTTLRIEPPFGTAVRVEQILDRHANGAPATAPRATTPVTAP QPAGVVVAPKPPQPPSPSASSAQPAGRASAKRETDTAVTAGSEAPKSATSTRNGTTTGTKSGPRTLSQLLGIPELIDSDT FFSGFPLLIRPTPKRPDQPPAKPS >Mature_184_residues MVQITRDFDNPGRANAALDDLRSQGFNTAELASGPDGRGKTTLRIEPPFGTAVRVEQILDRHANGAPATAPRATTPVTAP QPAGVVVAPKPPQPPSPSASSAQPAGRASAKRETDTAVTAGSEAPKSATSTRNGTTTGTKSGPRTLSQLLGIPELIDSDT FFSGFPLLIRPTPKRPDQPPAKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19007; Mature: 19007
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQITRDFDNPGRANAALDDLRSQGFNTAELASGPDGRGKTTLRIEPPFGTAVRVEQILD CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHH RHANGAPATAPRATTPVTAPQPAGVVVAPKPPQPPSPSASSAQPAGRASAKRETDTAVTA HCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GSEAPKSATSTRNGTTTGTKSGPRTLSQLLGIPELIDSDTFFSGFPLLIRPTPKRPDQPP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCCCC AKPS CCCC >Mature Secondary Structure MVQITRDFDNPGRANAALDDLRSQGFNTAELASGPDGRGKTTLRIEPPFGTAVRVEQILD CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHH RHANGAPATAPRATTPVTAPQPAGVVVAPKPPQPPSPSASSAQPAGRASAKRETDTAVTA HCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GSEAPKSATSTRNGTTTGTKSGPRTLSQLLGIPELIDSDTFFSGFPLLIRPTPKRPDQPP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCCCC AKPS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA