Click here to switch to the map view.

The map label for this gene is 86747839

Identifier: 86747839

GI number: 86747839

Start: 800617

End: 801036

Strand: Direct

Name: 86747839

Synonym: RPB_0713

Alternate gene names: NA

Gene position: 800617-801036 (Clockwise)

Preceding gene: 86747838

Following gene: 86747843

Centisome position: 15.02

GC content: 69.05

Gene sequence:

>420_bases
ATGATCAATCGCTTTGTCGGAACCGCCGTTGTCATCCTGGCGCTTGCCGCGCCGGCCGTCGCCAATGCCCAGGGTGTGCC
GGGCGGCATCGAGCGCGGTGCGCGTGACGGCGAGCGTGCCGCCGGCCCGGTCGGCGCAGTTGTCGGGGGCACCATCGGCG
GTGTCGTCGGCGGCGTCGCCGGCATCCTCGGCGTCGACGATCGCCCGCGCTTTCGCAGCTACGTGGTCGAGCAGCGCCGT
CCGTCCTACACCTATCGCGACGAGGTTCGCGTCGGCGCCGTACTGCCCGACGACGGCGTGACCTATTACGAGGTCCCGGA
CCGGTTCAATTCGGCGCGCGAGTATCGCTACACGGTGGTGAACGGCCGCACTGTTCTGGTCGAGCCGGGCACCCGCCGCA
TCGTCGAGATCATCGACTAA

Upstream 100 bases:

>100_bases
CCGCGCTGATGGAAGCGGCCGACGTGGCCTCGATGAGTTGCGCGGAACTGTTTCATGCGCGGCGACTTGTCAAGCACCTT
CCCAGAATCGGAGCTTCACT

Downstream 100 bases:

>100_bases
GCCAACGACGTCGGCGGGCCGCCTCTCGACGAGGCGGCCCGCGCCGCGCGTGGGTTGCGGCGGCGCGCGGCGCCTATCTG
CTCGATCGGACCAGCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MINRFVGTAVVILALAAPAVANAQGVPGGIERGARDGERAAGPVGAVVGGTIGGVVGGVAGILGVDDRPRFRSYVVEQRR
PSYTYRDEVRVGAVLPDDGVTYYEVPDRFNSAREYRYTVVNGRTVLVEPGTRRIVEIID

Sequences:

>Translated_139_residues
MINRFVGTAVVILALAAPAVANAQGVPGGIERGARDGERAAGPVGAVVGGTIGGVVGGVAGILGVDDRPRFRSYVVEQRR
PSYTYRDEVRVGAVLPDDGVTYYEVPDRFNSAREYRYTVVNGRTVLVEPGTRRIVEIID
>Mature_139_residues
MINRFVGTAVVILALAAPAVANAQGVPGGIERGARDGERAAGPVGAVVGGTIGGVVGGVAGILGVDDRPRFRSYVVEQRR
PSYTYRDEVRVGAVLPDDGVTYYEVPDRFNSAREYRYTVVNGRTVLVEPGTRRIVEIID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14787; Mature: 14787

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRFVGTAVVILALAAPAVANAQGVPGGIERGARDGERAAGPVGAVVGGTIGGVVGGVA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHH
GILGVDDRPRFRSYVVEQRRPSYTYRDEVRVGAVLPDDGVTYYEVPDRFNSAREYRYTVV
HHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEE
NGRTVLVEPGTRRIVEIID
CCCEEEECCCCCCHHEECC
>Mature Secondary Structure
MINRFVGTAVVILALAAPAVANAQGVPGGIERGARDGERAAGPVGAVVGGTIGGVVGGVA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHH
GILGVDDRPRFRSYVVEQRRPSYTYRDEVRVGAVLPDDGVTYYEVPDRFNSAREYRYTVV
HHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEE
NGRTVLVEPGTRRIVEIID
CCCEEEECCCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA