| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is zraS [C]
Identifier: 86747838
GI number: 86747838
Start: 798005
End: 800488
Strand: Direct
Name: zraS [C]
Synonym: RPB_0712
Alternate gene names: 86747838
Gene position: 798005-800488 (Clockwise)
Preceding gene: 86747837
Following gene: 86747839
Centisome position: 14.97
GC content: 67.43
Gene sequence:
>2484_bases ATGCTGGACCTGAAGAGATCGATGACGCCGGATTTCCTCGCCCGCGGCGGCGAGATGGGCGCTCTGATGCGCGCCCATGA CTGGGCGGATTCGACGCTCGGGCCGGCGGAGACATGGCCGCAGAGCCTGCGCACCGCGCTGCGGATTCTGCTCAACAGCA ACCATCCGATGTTCATCTGGTGGGGCCCCGATCTGATCCAGTTCTACAACGACGCCTACCGGCAGACGATGGGACCGGAG CGCCATCCCGGCGCACTCGGCCAGCGCGGGCGCGACTGCTGGGCGGAGATCTGGGACATCATCGGCCCGCAGATCGAGCA GGTGATGAGCGGCGGCGGATCGACCTGGCACGAAAATCATCTGGTGCCGGTGACGCGCAACGGCCGCCGCGAGGACGTCT ACTGGACCTACGGCTTCAGCCCGATCGATCAGGACGATTCGGTCGGCGGCGTGCTGGTGGTGTGTCGCGACGTGACGCGA GACGTATCGGCATCGATGGCGCTGCGCGAACGCGAGGCCGAGCTGGCGCGCGTGCAGCAAATCGGACGGATCGGCGGGCT CGAGGTCGATCTGCGGTCCGGCTTCCGCAACCGGCGTTCGCCGGAATATCTCCTGGTCCACGGTCTGCCGCCCGAGGCCG CGACGGAAACCCACGAAGACTGGGTTCGACGCATTCATCCCGAGGATCGCGAGGCGACCGAACGGCAATTCGTCGAGGCG GTGAACGGCGACGCCCGCGACTACGTCGCCCGCTATCGGATCATCCGTCCGAGCGACGGCGAAACGCGTTGGATCTCGGT GCGTGCGGTGATCGAGCGCGACGACAGCGGCACGCCGCTCCGGCTCGTCGGCGCGCATATCGACGTCACCGAACAGGTCG AGGCCGAGCAGAAGGCGCAGGCGAGCGAGGAAGCGGCGCGCAAACTCGCCGCACAGCTCGCGCAACTGAACACAACGCTC GCGCAACACGTCGAGGAAAAAACCCGCGAGCGCGACCGGATCTGGAATGTGTCGCAGGACCTGCTGCTGGTTGCCGACCG CCGCGGCGTCTGGCGCACGGTGAATCCGGCCTGGACCAATACGCTGGGCTGGAGCGAGGCCGAGCTGTTGAACAACACCT CGGAATGGATCGAGCACCCGGCCGATGGCGGCATTACACGGGCGCAGTTGGCCGAGCTGTGCGCGGGCGCCGGCACGGTG CGCTTCGAGAGCCGGATCCGCGCCAAGGACGGATCGTATCGCTGGTTGTCCTGGACCGGCGTCTCCGACGCCGACGCCTG CTACGCGGTCGCGCGCGACATCACCGCCGACAAGGCGGCGGCGGAGCGCCTCAAGGTCACCGAGGAGGCGCTCCGTCAAT CGCAGAAGATGGAGGCGGTCGGGCAACTCACCGGGGGTATCGCCCACGATTTCAACAATCTGCTGACCGGCATCGTCGGT TCGCTCGAGCTGATGCGGACCCGGCTCGAGCAGGGCCGCACCGACAATATCGCACGCTATATCGACGCCGCGATGATCTC GGCGAATCGTGCGGCCGCGCTCACCCACCGGTTGCTCGCCTTCGCCAGGCGTCAGCCGTTGGTACCGAAGCCGGTCGACG CCAATCACCTCGTGGTCTCGCTCGAGGATCTGCTGCGCCGGACGATCGGCGAAGCGATCGAGTTCGAGATCGCTGCGGCG CCGGATCTGTGGCTCACGCTGTGCGATCCCAACCAGCTCGAAAGCGCGCTGCTCAATCTGGCGATCAACGCCCGCGACGC GATGCCGGATGGCGGCCGGCTCACGATCACCACGCGCAATGCGACCTTCGACGGCGGCGAGATGCCCGCGCTGCTGCCCG GCGACTATGTCTGCCTGACCGTCTCCGACACCGGCGTCGGCATGAACGACGATGTCGCCGCGCGGGCATTCGAACCGTTC TTCACGACCAAGCCGCTCGGCCGGGGCACCGGCCTCGGACTGTCGATGATCTATGGTTTCGCGCAGCAATCGCGCGGACA TGCGAGCATCGCCAGCGCGCGGTCCGAAGGCACCTCGGTCACGCTGTATCTGCCGCGCGAACACGGCGACGCAGGCGAGC GGCAGGAGCCGGCGAAGCCGCCACGCGCGGATGCTGCCCGCGGCGAGACCGTGCTGGTGGTCGAGGACGAGGCGGTGGTG CGCGCGGTGATCGTCGAGATGCTGCGTGACCAGGGTTATCGCGTGCTCGAGGCCGTGGATGGGCCATCCGGACTGGCGAT GCTGCAGGGCGACGAGCCGATCGACCTGCTGCTGTCGGATATCGGGCTGCCCGGCCTCAATGGACGCCAGCTCGCCGACT ATGCGCGCCTCCACCGACCGGACATCGGCGTGTTGCTGATGACCGGCTACGCCGAAAGCGCGGCGATGACCGACGGCATT CGCGAGGCCGGCATCGAACTGATCACCAAGCCGTTCGACCACGGCGATCTGATGACACGCGTGCGCGCGATGGTTGCCGA TTAG
Upstream 100 bases:
>100_bases GCGCAACGCCGGCCTGCCCGGCGCCGACATTTGCGCCTGTCGCGGCGGATGTTAGGTTGAGCGTTCGCCGCAGATCGTCT TAGCCCATCACGCGGGTTGA
Downstream 100 bases:
>100_bases TTCCAGTCTGACGATTCGTTCATCGACTCCGCGCTGATGGAAGCGGCCGACGTGGCCTCGATGAGTTGCGCGGAACTGTT TCATGCGCGGCGACTTGTCA
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MLDLKRSMTPDFLARGGEMGALMRAHDWADSTLGPAETWPQSLRTALRILLNSNHPMFIWWGPDLIQFYNDAYRQTMGPE RHPGALGQRGRDCWAEIWDIIGPQIEQVMSGGGSTWHENHLVPVTRNGRREDVYWTYGFSPIDQDDSVGGVLVVCRDVTR DVSASMALREREAELARVQQIGRIGGLEVDLRSGFRNRRSPEYLLVHGLPPEAATETHEDWVRRIHPEDREATERQFVEA VNGDARDYVARYRIIRPSDGETRWISVRAVIERDDSGTPLRLVGAHIDVTEQVEAEQKAQASEEAARKLAAQLAQLNTTL AQHVEEKTRERDRIWNVSQDLLLVADRRGVWRTVNPAWTNTLGWSEAELLNNTSEWIEHPADGGITRAQLAELCAGAGTV RFESRIRAKDGSYRWLSWTGVSDADACYAVARDITADKAAAERLKVTEEALRQSQKMEAVGQLTGGIAHDFNNLLTGIVG SLELMRTRLEQGRTDNIARYIDAAMISANRAAALTHRLLAFARRQPLVPKPVDANHLVVSLEDLLRRTIGEAIEFEIAAA PDLWLTLCDPNQLESALLNLAINARDAMPDGGRLTITTRNATFDGGEMPALLPGDYVCLTVSDTGVGMNDDVAARAFEPF FTTKPLGRGTGLGLSMIYGFAQQSRGHASIASARSEGTSVTLYLPREHGDAGERQEPAKPPRADAARGETVLVVEDEAVV RAVIVEMLRDQGYRVLEAVDGPSGLAMLQGDEPIDLLLSDIGLPGLNGRQLADYARLHRPDIGVLLMTGYAESAAMTDGI REAGIELITKPFDHGDLMTRVRAMVAD
Sequences:
>Translated_827_residues MLDLKRSMTPDFLARGGEMGALMRAHDWADSTLGPAETWPQSLRTALRILLNSNHPMFIWWGPDLIQFYNDAYRQTMGPE RHPGALGQRGRDCWAEIWDIIGPQIEQVMSGGGSTWHENHLVPVTRNGRREDVYWTYGFSPIDQDDSVGGVLVVCRDVTR DVSASMALREREAELARVQQIGRIGGLEVDLRSGFRNRRSPEYLLVHGLPPEAATETHEDWVRRIHPEDREATERQFVEA VNGDARDYVARYRIIRPSDGETRWISVRAVIERDDSGTPLRLVGAHIDVTEQVEAEQKAQASEEAARKLAAQLAQLNTTL AQHVEEKTRERDRIWNVSQDLLLVADRRGVWRTVNPAWTNTLGWSEAELLNNTSEWIEHPADGGITRAQLAELCAGAGTV RFESRIRAKDGSYRWLSWTGVSDADACYAVARDITADKAAAERLKVTEEALRQSQKMEAVGQLTGGIAHDFNNLLTGIVG SLELMRTRLEQGRTDNIARYIDAAMISANRAAALTHRLLAFARRQPLVPKPVDANHLVVSLEDLLRRTIGEAIEFEIAAA PDLWLTLCDPNQLESALLNLAINARDAMPDGGRLTITTRNATFDGGEMPALLPGDYVCLTVSDTGVGMNDDVAARAFEPF FTTKPLGRGTGLGLSMIYGFAQQSRGHASIASARSEGTSVTLYLPREHGDAGERQEPAKPPRADAARGETVLVVEDEAVV RAVIVEMLRDQGYRVLEAVDGPSGLAMLQGDEPIDLLLSDIGLPGLNGRQLADYARLHRPDIGVLLMTGYAESAAMTDGI REAGIELITKPFDHGDLMTRVRAMVAD >Mature_827_residues MLDLKRSMTPDFLARGGEMGALMRAHDWADSTLGPAETWPQSLRTALRILLNSNHPMFIWWGPDLIQFYNDAYRQTMGPE RHPGALGQRGRDCWAEIWDIIGPQIEQVMSGGGSTWHENHLVPVTRNGRREDVYWTYGFSPIDQDDSVGGVLVVCRDVTR DVSASMALREREAELARVQQIGRIGGLEVDLRSGFRNRRSPEYLLVHGLPPEAATETHEDWVRRIHPEDREATERQFVEA VNGDARDYVARYRIIRPSDGETRWISVRAVIERDDSGTPLRLVGAHIDVTEQVEAEQKAQASEEAARKLAAQLAQLNTTL AQHVEEKTRERDRIWNVSQDLLLVADRRGVWRTVNPAWTNTLGWSEAELLNNTSEWIEHPADGGITRAQLAELCAGAGTV RFESRIRAKDGSYRWLSWTGVSDADACYAVARDITADKAAAERLKVTEEALRQSQKMEAVGQLTGGIAHDFNNLLTGIVG SLELMRTRLEQGRTDNIARYIDAAMISANRAAALTHRLLAFARRQPLVPKPVDANHLVVSLEDLLRRTIGEAIEFEIAAA PDLWLTLCDPNQLESALLNLAINARDAMPDGGRLTITTRNATFDGGEMPALLPGDYVCLTVSDTGVGMNDDVAARAFEPF FTTKPLGRGTGLGLSMIYGFAQQSRGHASIASARSEGTSVTLYLPREHGDAGERQEPAKPPRADAARGETVLVVEDEAVV RAVIVEMLRDQGYRVLEAVDGPSGLAMLQGDEPIDLLLSDIGLPGLNGRQLADYARLHRPDIGVLLMTGYAESAAMTDGI REAGIELITKPFDHGDLMTRVRAMVAD
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=28.099173553719, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788549, Length=377, Percent_Identity=25.4641909814324, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=26.4925373134328, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI48994928, Length=514, Percent_Identity=23.3463035019455, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788713, Length=268, Percent_Identity=24.2537313432836, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790861, Length=234, Percent_Identity=27.3504273504274, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91324; Mature: 91324
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLKRSMTPDFLARGGEMGALMRAHDWADSTLGPAETWPQSLRTALRILLNSNHPMFIW CCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE WGPDLIQFYNDAYRQTMGPERHPGALGQRGRDCWAEIWDIIGPQIEQVMSGGGSTWHENH ECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC LVPVTRNGRREDVYWTYGFSPIDQDDSVGGVLVVCRDVTRDVSASMALREREAELARVQQ EEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH IGRIGGLEVDLRSGFRNRRSPEYLLVHGLPPEAATETHEDWVRRIHPEDREATERQFVEA HHHCCCEEEEHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH VNGDARDYVARYRIIRPSDGETRWISVRAVIERDDSGTPLRLVGAHIDVTEQVEAEQKAQ HCCCHHHHHHHHEEECCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHH ASEEAARKLAAQLAQLNTTLAQHVEEKTRERDRIWNVSQDLLLVADRRGVWRTVNPAWTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCC TLGWSEAELLNNTSEWIEHPADGGITRAQLAELCAGAGTVRFESRIRAKDGSYRWLSWTG CCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCCCCEEEEEECC VSDADACYAVARDITADKAAAERLKVTEEALRQSQKMEAVGQLTGGIAHDFNNLLTGIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLELMRTRLEQGRTDNIARYIDAAMISANRAAALTHRLLAFARRQPLVPKPVDANHLVVS HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE LEDLLRRTIGEAIEFEIAAAPDLWLTLCDPNQLESALLNLAINARDAMPDGGRLTITTRN HHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEEECC ATFDGGEMPALLPGDYVCLTVSDTGVGMNDDVAARAFEPFFTTKPLGRGTGLGLSMIYGF CCCCCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH AQQSRGHASIASARSEGTSVTLYLPREHGDAGERQEPAKPPRADAARGETVLVVEDEAVV HHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH RAVIVEMLRDQGYRVLEAVDGPSGLAMLQGDEPIDLLLSDIGLPGLNGRQLADYARLHRP HHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC DIGVLLMTGYAESAAMTDGIREAGIELITKPFDHGDLMTRVRAMVAD CCCEEEEECCCCHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLDLKRSMTPDFLARGGEMGALMRAHDWADSTLGPAETWPQSLRTALRILLNSNHPMFIW CCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE WGPDLIQFYNDAYRQTMGPERHPGALGQRGRDCWAEIWDIIGPQIEQVMSGGGSTWHENH ECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC LVPVTRNGRREDVYWTYGFSPIDQDDSVGGVLVVCRDVTRDVSASMALREREAELARVQQ EEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH IGRIGGLEVDLRSGFRNRRSPEYLLVHGLPPEAATETHEDWVRRIHPEDREATERQFVEA HHHCCCEEEEHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH VNGDARDYVARYRIIRPSDGETRWISVRAVIERDDSGTPLRLVGAHIDVTEQVEAEQKAQ HCCCHHHHHHHHEEECCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHH ASEEAARKLAAQLAQLNTTLAQHVEEKTRERDRIWNVSQDLLLVADRRGVWRTVNPAWTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCC TLGWSEAELLNNTSEWIEHPADGGITRAQLAELCAGAGTVRFESRIRAKDGSYRWLSWTG CCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCCCCEEEEEECC VSDADACYAVARDITADKAAAERLKVTEEALRQSQKMEAVGQLTGGIAHDFNNLLTGIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLELMRTRLEQGRTDNIARYIDAAMISANRAAALTHRLLAFARRQPLVPKPVDANHLVVS HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE LEDLLRRTIGEAIEFEIAAAPDLWLTLCDPNQLESALLNLAINARDAMPDGGRLTITTRN HHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEEECC ATFDGGEMPALLPGDYVCLTVSDTGVGMNDDVAARAFEPFFTTKPLGRGTGLGLSMIYGF CCCCCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH AQQSRGHASIASARSEGTSVTLYLPREHGDAGERQEPAKPPRADAARGETVLVVEDEAVV HHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH RAVIVEMLRDQGYRVLEAVDGPSGLAMLQGDEPIDLLLSDIGLPGLNGRQLADYARLHRP HHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC DIGVLLMTGYAESAAMTDGIREAGIELITKPFDHGDLMTRVRAMVAD CCCEEEEECCCCHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA