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The map label for this gene is 86747458

Identifier: 86747458

GI number: 86747458

Start: 377547

End: 378179

Strand: Direct

Name: 86747458

Synonym: RPB_0332

Alternate gene names: NA

Gene position: 377547-378179 (Clockwise)

Preceding gene: 86747457

Following gene: 86747459

Centisome position: 7.08

GC content: 65.24

Gene sequence:

>633_bases
ATGTCGAGCACCACGCTCAGTGAAAACGATGCCGCCGCCGGCGCTGCGCGACAAGTGATCCAGCCCGCCTGGGTGCGGGT
CGTGCACTGGATCAACGCCGCCGCGATGATCGTGATGATCCTATCCGGCTGGCAGATCTACAACGCTTCGCCGCTGTTCG
ATTTCCAGTTCTCGCGCGCGATCACGCTGGGCGGCTGGCTCGGCGGCGGATTGCTGTGGCACTTCGCGGCGATGTGGGTG
CTGATGCTCAACGGCCTGGTGTATCTCGCGGTCGGCTTCGCCACCGGCCGCTTCCGCCGCAAGCTGTGGCCGATCACGCC
CTCCGGCGTCGTCACCGACCTCGCCAGGGCCGCGACCTTCCGGCTGTCGCACGCCGACCTCACCACCTACAACTATGTCC
AGAAGCTGCTCTATGCCGGCATCATTCTGGTCGGAATCCTGGCCGTGCTGTCGGGCCTGTCGATCTGGAAGCCGGTCCAG
TTCCAGACGCTGACGGCCCTGTTCGGCGGCTACGACACCGCGCGCTACGTGCATTTCTTCGCGATGGCGGCGATCGTCGG
ATTCCTCGTCATTCACGTCGTGCTGGCGGTGCTGGTGCCGAAGAGCCTGCGGGCGATGATCCTCGGGAGATAG

Upstream 100 bases:

>100_bases
GTCGATCTCGCCGTGGAAGGGAAGCGGGCGTAACGAGGCGGGGTTATAGTCCGTATCGTCAAGGCCATCGCTTTGATGAC
GAACCGCTTCAGGATGTCCG

Downstream 100 bases:

>100_bases
TCGATGCTGCGCATCAAATCGCTGCTGATCCCCGGCGTCGACAAGACGCTGTTGGTCAAGGACGCCGCCCGGCTGATGCC
GGATCTCACGCGCCGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Thiosulfate Reductase Cytochrome Subunit B-Like Protein; Transmembrane B-Type Cytochrome Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Ni/Fe-Hydrogenase B-Type Cytochrome Subunit; Cytochrome; Cytochrome B/B6 Domain Protein; Conserved Protein; B-Type Cytochomre; [Ni/Fe] Hydrogenase B-Type Cytochrome Subunit; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSSTTLSENDAAAGAARQVIQPAWVRVVHWINAAAMIVMILSGWQIYNASPLFDFQFSRAITLGGWLGGGLLWHFAAMWV
LMLNGLVYLAVGFATGRFRRKLWPITPSGVVTDLARAATFRLSHADLTTYNYVQKLLYAGIILVGILAVLSGLSIWKPVQ
FQTLTALFGGYDTARYVHFFAMAAIVGFLVIHVVLAVLVPKSLRAMILGR

Sequences:

>Translated_210_residues
MSSTTLSENDAAAGAARQVIQPAWVRVVHWINAAAMIVMILSGWQIYNASPLFDFQFSRAITLGGWLGGGLLWHFAAMWV
LMLNGLVYLAVGFATGRFRRKLWPITPSGVVTDLARAATFRLSHADLTTYNYVQKLLYAGIILVGILAVLSGLSIWKPVQ
FQTLTALFGGYDTARYVHFFAMAAIVGFLVIHVVLAVLVPKSLRAMILGR
>Mature_209_residues
SSTTLSENDAAAGAARQVIQPAWVRVVHWINAAAMIVMILSGWQIYNASPLFDFQFSRAITLGGWLGGGLLWHFAAMWVL
MLNGLVYLAVGFATGRFRRKLWPITPSGVVTDLARAATFRLSHADLTTYNYVQKLLYAGIILVGILAVLSGLSIWKPVQF
QTLTALFGGYDTARYVHFFAMAAIVGFLVIHVVLAVLVPKSLRAMILGR

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23029; Mature: 22897

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTTLSENDAAAGAARQVIQPAWVRVVHWINAAAMIVMILSGWQIYNASPLFDFQFSRA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHH
ITLGGWLGGGLLWHFAAMWVLMLNGLVYLAVGFATGRFRRKLWPITPSGVVTDLARAATF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RLSHADLTTYNYVQKLLYAGIILVGILAVLSGLSIWKPVQFQTLTALFGGYDTARYVHFF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AMAAIVGFLVIHVVLAVLVPKSLRAMILGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSTTLSENDAAAGAARQVIQPAWVRVVHWINAAAMIVMILSGWQIYNASPLFDFQFSRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHH
ITLGGWLGGGLLWHFAAMWVLMLNGLVYLAVGFATGRFRRKLWPITPSGVVTDLARAATF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RLSHADLTTYNYVQKLLYAGIILVGILAVLSGLSIWKPVQFQTLTALFGGYDTARYVHFF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AMAAIVGFLVIHVVLAVLVPKSLRAMILGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA