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The map label for this gene is 86747457

Identifier: 86747457

GI number: 86747457

Start: 376744

End: 377325

Strand: Direct

Name: 86747457

Synonym: RPB_0331

Alternate gene names: NA

Gene position: 376744-377325 (Clockwise)

Preceding gene: 86747456

Following gene: 86747458

Centisome position: 7.07

GC content: 64.95

Gene sequence:

>582_bases
ATGTCGAAGCGAATTGCCTATCTGTCCGCCGCGGCGCTGAGCGCATTGGCGCTCACCGCGACCGTGACCGTACCGGCGCA
GGCCGAATCCAAGAAGATGATGAAGAGCGAGATGAGCGGCGACACCGTGATGGTCGGCGGCGCGCCGATGTATCCGTCGA
AGAACATCGTCGAGAACGCCGTCAACTCCAAGGATCACACCACGCTGGTCGCCGCGGTGAAGGCCGCCGGCCTGGTCAAG
ACGCTGGAAGGCAAGGGCCCGTTCACGGTGTTCGCGCCGACCAACGCCGCCTTCGGCAAGCTCCCGGCCGGCACCGTCGA
CACGCTGGTGAAGCCCGAGAACAAGCAGCAGCTCACCAAGATCCTCACCTATCACGTGGTGCCCGGCAAGCTCGTCGCCG
CCGACCTCACCGACGGCAAGAAGCTGACCACCGTCGAGGGCGAAGTCCTGACCGTCAAGCGCGCCGGCGACAGCGTGATG
CTGGTCGACAGCAAGGGCGGCAGCTCGACCGTCACCATCCCGAACGTCAACCAGTCGAACGGCGTCATTCACGTCGTCGA
CACCGTGCTGATGCCGTCCTGA

Upstream 100 bases:

>100_bases
CTGGCTGCAACGACGGAGCCCTCCAGCCCCCCAACGCGCCGTCGTTGCGAACCTCGCCCGCGTGCTTGGCCGCGGGTCCA
ACCGAATCGGGAGACGAAAC

Downstream 100 bases:

>100_bases
CGATCGCTTCCGCTGCTTCCAACGTCCCCCGAGGCGGCGGATGAAGCGGCGACCACCACGCTGCTTCGCGAAGGGCGCGG
GCCGGGACACCGGCTCGCGC

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSKRIAYLSAAALSALALTATVTVPAQAESKKMMKSEMSGDTVMVGGAPMYPSKNIVENAVNSKDHTTLVAAVKAAGLVK
TLEGKGPFTVFAPTNAAFGKLPAGTVDTLVKPENKQQLTKILTYHVVPGKLVAADLTDGKKLTTVEGEVLTVKRAGDSVM
LVDSKGGSSTVTIPNVNQSNGVIHVVDTVLMPS

Sequences:

>Translated_193_residues
MSKRIAYLSAAALSALALTATVTVPAQAESKKMMKSEMSGDTVMVGGAPMYPSKNIVENAVNSKDHTTLVAAVKAAGLVK
TLEGKGPFTVFAPTNAAFGKLPAGTVDTLVKPENKQQLTKILTYHVVPGKLVAADLTDGKKLTTVEGEVLTVKRAGDSVM
LVDSKGGSSTVTIPNVNQSNGVIHVVDTVLMPS
>Mature_192_residues
SKRIAYLSAAALSALALTATVTVPAQAESKKMMKSEMSGDTVMVGGAPMYPSKNIVENAVNSKDHTTLVAAVKAAGLVKT
LEGKGPFTVFAPTNAAFGKLPAGTVDTLVKPENKQQLTKILTYHVVPGKLVAADLTDGKKLTTVEGEVLTVKRAGDSVML
VDSKGGSSTVTIPNVNQSNGVIHVVDTVLMPS

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=126, Percent_Identity=35.7142857142857, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI209862911, Length=142, Percent_Identity=29.5774647887324, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI209863034, Length=142, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI209863011, Length=142, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI209862907, Length=142, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 19978; Mature: 19847

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRIAYLSAAALSALALTATVTVPAQAESKKMMKSEMSGDTVMVGGAPMYPSKNIVENA
CCCEEHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
VNSKDHTTLVAAVKAAGLVKTLEGKGPFTVFAPTNAAFGKLPAGTVDTLVKPENKQQLTK
CCCCCCHHHEEHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCHHHEECCCCHHHHHH
ILTYHVVPGKLVAADLTDGKKLTTVEGEVLTVKRAGDSVMLVDSKGGSSTVTIPNVNQSN
HHHHCCCCCEEEEEECCCCCEEEEECCEEEEEEECCCEEEEEECCCCCCEEEECCCCCCC
GVIHVVDTVLMPS
CEEEEEEEEECCC
>Mature Secondary Structure 
SKRIAYLSAAALSALALTATVTVPAQAESKKMMKSEMSGDTVMVGGAPMYPSKNIVENA
CCEEHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
VNSKDHTTLVAAVKAAGLVKTLEGKGPFTVFAPTNAAFGKLPAGTVDTLVKPENKQQLTK
CCCCCCHHHEEHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCHHHEECCCCHHHHHH
ILTYHVVPGKLVAADLTDGKKLTTVEGEVLTVKRAGDSVMLVDSKGGSSTVTIPNVNQSN
HHHHCCCCCEEEEEECCCCCEEEEECCEEEEEEECCCEEEEEECCCCCCEEEECCCCCCC
GVIHVVDTVLMPS
CEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]