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The map label for this gene is yedY [H]

Identifier: 86747459

GI number: 86747459

Start: 378183

End: 378962

Strand: Direct

Name: yedY [H]

Synonym: RPB_0333

Alternate gene names: 86747459

Gene position: 378183-378962 (Clockwise)

Preceding gene: 86747458

Following gene: 86747461

Centisome position: 7.09

GC content: 63.08

Gene sequence:

>780_bases
ATGCTGCGCATCAAATCGCTGCTGATCCCCGGCGTCGACAAGACGCTGTTGGTCAAGGACGCCGCCCGGCTGATGCCGGA
TCTCACGCGCCGGCGTTTTCTCTCCGGCGGCGCCAGCCTCGGCGCGCTGACGCTGCTGACCGGCTGCGACGTGATCGACG
GCGCCTCGGCCGAGAACCTGCTCGCCAAGGTGTCGAAGTTCAACGATGCGGTGCAGGCGGCGATCTTCGATCCGAACACG
CTGGCGCCGACCTACAGCGAAAAGGACATCACCCGGCCGTTCCCGTTCAACGCGTATTACTCGCTGGACGAGGCGCCGGA
GATCGACGGCAAGGATTGGGCGCTCGAAGTCTCGGGCCTGGTCGACAGCAAGAAGAGCTGGACGCTCGCTGAACTGACGC
AGCTCCCCGAAGTCGGGCAGATCACCCGGCACATCTGCGTCGAGGGCTGGAGCGCGATCGGCTCGTGGAGCGGCGTGCGG
CTGAGCGATTTCCTCAAACTGGTCGGCGCCGACACCAACGCCAAATACGTCTGGTTCCGCTGCGCCGACGACTACACCTC
GCCGATCGACATGCCGACCGCCCTGCATCCGCAGACCCAGATGACGCTGAAATACGACGGCCAGATCCTGCCGCGCGCCT
ACGGCTATCCGATGAAGATCCGAATCCCGACCAAGCTCGGCTTCAAGAATCCGAAATACGTCGTCGCGATGGAAGTCACC
AACGACTACAAAGGCGGCTATTGGGAAGACCAGGGCTACAATTCGTTCAGCGGACTGTAA

Upstream 100 bases:

>100_bases
CTTCGCGATGGCGGCGATCGTCGGATTCCTCGTCATTCACGTCGTGCTGGCGGTGCTGGTGCCGAAGAGCCTGCGGGCGA
TGATCCTCGGGAGATAGTCG

Downstream 100 bases:

>100_bases
TCGCTCCTTCCACCGTCATTCCGGGGCACGCGCGACGCGCGTGAACCCGGAATCACGAGCTGTTCTGCGGTGCTCATCAC
CTCGAGATTCCGGGTTCGTT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLRIKSLLIPGVDKTLLVKDAARLMPDLTRRRFLSGGASLGALTLLTGCDVIDGASAENLLAKVSKFNDAVQAAIFDPNT
LAPTYSEKDITRPFPFNAYYSLDEAPEIDGKDWALEVSGLVDSKKSWTLAELTQLPEVGQITRHICVEGWSAIGSWSGVR
LSDFLKLVGADTNAKYVWFRCADDYTSPIDMPTALHPQTQMTLKYDGQILPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
NDYKGGYWEDQGYNSFSGL

Sequences:

>Translated_259_residues
MLRIKSLLIPGVDKTLLVKDAARLMPDLTRRRFLSGGASLGALTLLTGCDVIDGASAENLLAKVSKFNDAVQAAIFDPNT
LAPTYSEKDITRPFPFNAYYSLDEAPEIDGKDWALEVSGLVDSKKSWTLAELTQLPEVGQITRHICVEGWSAIGSWSGVR
LSDFLKLVGADTNAKYVWFRCADDYTSPIDMPTALHPQTQMTLKYDGQILPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
NDYKGGYWEDQGYNSFSGL
>Mature_259_residues
MLRIKSLLIPGVDKTLLVKDAARLMPDLTRRRFLSGGASLGALTLLTGCDVIDGASAENLLAKVSKFNDAVQAAIFDPNT
LAPTYSEKDITRPFPFNAYYSLDEAPEIDGKDWALEVSGLVDSKKSWTLAELTQLPEVGQITRHICVEGWSAIGSWSGVR
LSDFLKLVGADTNAKYVWFRCADDYTSPIDMPTALHPQTQMTLKYDGQILPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
NDYKGGYWEDQGYNSFSGL

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=156, Percent_Identity=30.1282051282051, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 28689; Mature: 28689

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIKSLLIPGVDKTLLVKDAARLMPDLTRRRFLSGGASLGALTLLTGCDVIDGASAENL
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHH
LAKVSKFNDAVQAAIFDPNTLAPTYSEKDITRPFPFNAYYSLDEAPEIDGKDWALEVSGL
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECC
VDSKKSWTLAELTQLPEVGQITRHICVEGWSAIGSWSGVRLSDFLKLVGADTNAKYVWFR
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEE
CADDYTSPIDMPTALHPQTQMTLKYDGQILPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
ECCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEECHHCCCCCCCEEEEEEEC
NDYKGGYWEDQGYNSFSGL
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRIKSLLIPGVDKTLLVKDAARLMPDLTRRRFLSGGASLGALTLLTGCDVIDGASAENL
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHH
LAKVSKFNDAVQAAIFDPNTLAPTYSEKDITRPFPFNAYYSLDEAPEIDGKDWALEVSGL
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECC
VDSKKSWTLAELTQLPEVGQITRHICVEGWSAIGSWSGVRLSDFLKLVGADTNAKYVWFR
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEE
CADDYTSPIDMPTALHPQTQMTLKYDGQILPRAYGYPMKIRIPTKLGFKNPKYVVAMEVT
ECCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEECHHCCCCCCCEEEEEEEC
NDYKGGYWEDQGYNSFSGL
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]