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The map label for this gene is 86747341

Identifier: 86747341

GI number: 86747341

Start: 242500

End: 243780

Strand: Direct

Name: 86747341

Synonym: RPB_0215

Alternate gene names: NA

Gene position: 242500-243780 (Clockwise)

Preceding gene: 86747336

Following gene: 86747344

Centisome position: 4.55

GC content: 67.53

Gene sequence:

>1281_bases
ATGACCGAGCTGACCATCATTTGCCCGAACTGCGCCACCAGCGTCCCGCTGACGGAATCGCTGGCGGCGCCGCTGCTCAA
GGATACGCAGAGCAAATACGAGCGGCTGATCGCGCAGAAGGACAAGGACATCGCCGGCCGCGAGGCCGCGCTGGAGGCGC
AGCGGGCCGATCTCGACAACGCGAAAGCCGCCGTCGGCCAGCAGGTCGCCGAGCGGATCGCGGTCGAGCGCACCCGGATC
GCCGCCGAGGAAGCCGCCAAAGCGAAGCGGCTCGCGGCCGACGACCTCGACGCCAAGGCGCGGCAACTCGCCGAACTCAC
CGAGGCGATGCAGCAGAAGGACGTCAAGCTCGCCGAAGCGCAGCGGGCGCAGGCGGCGTTCCTGCAGAAGCAGCGCCAGC
TCGAAGACGAGAAGCGCGAGCTCGACCTCACCATCGAAAAGCGCGTGCAGGCGTCGCTGGAGAGCGTGCGCAGCAAGGCC
AAACAGGATGCCGAAGAGGGGCTGCGGCTCAAGGTCGCCGAGAAGGAAGAAACCATCGCGACGATGCAGCGGCAGATCGA
CAAGCTGAAATCCGAGCAGGGCTCGCAGCAATTGCAGGGCGAGGTGATGGAGCTCGAGCTCGAAGCCTCGCTGCGCGCAC
GCTTCCCGCAGGATTCGATCGAGCCGGTGCCGAAGGGCGAGTTCGGCGGCGACGTGCTGCACCGCGTGGTCAACGCCGCC
AATCAGCCCTGCGGCACGATCCTGTGGGAATCCAAGCGCACCAAGAACTGGACCGACGGCTGGCTGACCAAGCTGCGCGA
CGACCAGCGCAAGGCCAAGGCCGAGCTGGCGCTGATCGTCTCCAACGCGCTGCCGAAGGGCGTGCACAGCTTCGATCACA
TCGACGGCGTCTGGGTCGCCGAGGCGCGCTGCGCGATCCCGGTCGCGATCGCGCTGCGACAGTCGCTGATCGAGCTCGCC
GCCGCGCGCCAGGCCGGCGAAGGCCAGCAGACCAAGACCGAGCTGGTGTATCACTATCTCACCGGGCCGCGGTTCCGGCA
GCGGGTCGAGGCGATCGTCGAGAAATTCACCGAGATGCAGTCCGACCTCGACAAGGAACGCCGCTCGATGATGCGGATGT
GGGCGAAGCGCGAGGCGCAGATCCGCGGCGTGCTGGAAGCGACCGCCGGGATGTATGGCGACCTGCAGGGCATCGCCGGC
AAGGCGCTGGGCGAGATCGACGGCATGGCGCTGCCGATGCTGGAGGATTTCAGCGACGACGAGGCCGATCAGGCGGCGTG
A

Upstream 100 bases:

>100_bases
CGGAACCCTGTTTTCCGGGAAAACCGCAGTATTCCCGTGAACAATCCATGAACCTGCTTTAGACTCCCACCGACCGGACT
GCACAAGAGAGTCGCCCGCC

Downstream 100 bases:

>100_bases
GCGCGGCCTTCTGCGATCGGTGCGCGATCAGTACGACTTCGCCAGCCCCAGCACCTTCTCGGCGATGAAGGAGAGCGCCA
GCTGCGGGCTGACCGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTELTIICPNCATSVPLTESLAAPLLKDTQSKYERLIAQKDKDIAGREAALEAQRADLDNAKAAVGQQVAERIAVERTRI
AAEEAAKAKRLAADDLDAKARQLAELTEAMQQKDVKLAEAQRAQAAFLQKQRQLEDEKRELDLTIEKRVQASLESVRSKA
KQDAEEGLRLKVAEKEETIATMQRQIDKLKSEQGSQQLQGEVMELELEASLRARFPQDSIEPVPKGEFGGDVLHRVVNAA
NQPCGTILWESKRTKNWTDGWLTKLRDDQRKAKAELALIVSNALPKGVHSFDHIDGVWVAEARCAIPVAIALRQSLIELA
AARQAGEGQQTKTELVYHYLTGPRFRQRVEAIVEKFTEMQSDLDKERRSMMRMWAKREAQIRGVLEATAGMYGDLQGIAG
KALGEIDGMALPMLEDFSDDEADQAA

Sequences:

>Translated_426_residues
MTELTIICPNCATSVPLTESLAAPLLKDTQSKYERLIAQKDKDIAGREAALEAQRADLDNAKAAVGQQVAERIAVERTRI
AAEEAAKAKRLAADDLDAKARQLAELTEAMQQKDVKLAEAQRAQAAFLQKQRQLEDEKRELDLTIEKRVQASLESVRSKA
KQDAEEGLRLKVAEKEETIATMQRQIDKLKSEQGSQQLQGEVMELELEASLRARFPQDSIEPVPKGEFGGDVLHRVVNAA
NQPCGTILWESKRTKNWTDGWLTKLRDDQRKAKAELALIVSNALPKGVHSFDHIDGVWVAEARCAIPVAIALRQSLIELA
AARQAGEGQQTKTELVYHYLTGPRFRQRVEAIVEKFTEMQSDLDKERRSMMRMWAKREAQIRGVLEATAGMYGDLQGIAG
KALGEIDGMALPMLEDFSDDEADQAA
>Mature_425_residues
TELTIICPNCATSVPLTESLAAPLLKDTQSKYERLIAQKDKDIAGREAALEAQRADLDNAKAAVGQQVAERIAVERTRIA
AEEAAKAKRLAADDLDAKARQLAELTEAMQQKDVKLAEAQRAQAAFLQKQRQLEDEKRELDLTIEKRVQASLESVRSKAK
QDAEEGLRLKVAEKEETIATMQRQIDKLKSEQGSQQLQGEVMELELEASLRARFPQDSIEPVPKGEFGGDVLHRVVNAAN
QPCGTILWESKRTKNWTDGWLTKLRDDQRKAKAELALIVSNALPKGVHSFDHIDGVWVAEARCAIPVAIALRQSLIELAA
ARQAGEGQQTKTELVYHYLTGPRFRQRVEAIVEKFTEMQSDLDKERRSMMRMWAKREAQIRGVLEATAGMYGDLQGIAGK
ALGEIDGMALPMLEDFSDDEADQAA

Specific function: Unknown

COG id: COG4487

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47337; Mature: 47206

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELTIICPNCATSVPLTESLAAPLLKDTQSKYERLIAQKDKDIAGREAALEAQRADLDN
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH
AKAAVGQQVAERIAVERTRIAAEEAAKAKRLAADDLDAKARQLAELTEAMQQKDVKLAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH
QRAQAAFLQKQRQLEDEKRELDLTIEKRVQASLESVRSKAKQDAEEGLRLKVAEKEETIA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
TMQRQIDKLKSEQGSQQLQGEVMELELEASLRARFPQDSIEPVPKGEFGGDVLHRVVNAA
HHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC
NQPCGTILWESKRTKNWTDGWLTKLRDDQRKAKAELALIVSNALPKGVHSFDHIDGVWVA
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEE
EARCAIPVAIALRQSLIELAAARQAGEGQQTKTELVYHYLTGPRFRQRVEAIVEKFTEMQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SDLDKERRSMMRMWAKREAQIRGVLEATAGMYGDLQGIAGKALGEIDGMALPMLEDFSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
EADQAA
CCCCCC
>Mature Secondary Structure 
TELTIICPNCATSVPLTESLAAPLLKDTQSKYERLIAQKDKDIAGREAALEAQRADLDN
CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH
AKAAVGQQVAERIAVERTRIAAEEAAKAKRLAADDLDAKARQLAELTEAMQQKDVKLAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH
QRAQAAFLQKQRQLEDEKRELDLTIEKRVQASLESVRSKAKQDAEEGLRLKVAEKEETIA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
TMQRQIDKLKSEQGSQQLQGEVMELELEASLRARFPQDSIEPVPKGEFGGDVLHRVVNAA
HHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC
NQPCGTILWESKRTKNWTDGWLTKLRDDQRKAKAELALIVSNALPKGVHSFDHIDGVWVA
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEE
EARCAIPVAIALRQSLIELAAARQAGEGQQTKTELVYHYLTGPRFRQRVEAIVEKFTEMQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SDLDKERRSMMRMWAKREAQIRGVLEATAGMYGDLQGIAGKALGEIDGMALPMLEDFSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
EADQAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA