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The map label for this gene is 86747316

Identifier: 86747316

GI number: 86747316

Start: 210211

End: 211887

Strand: Direct

Name: 86747316

Synonym: RPB_0190

Alternate gene names: NA

Gene position: 210211-211887 (Clockwise)

Preceding gene: 86747315

Following gene: 86747319

Centisome position: 3.94

GC content: 62.61

Gene sequence:

>1677_bases
ATGCCGTCACCGGTCCGGAAAAGGAGCGCAGACGGGTCCGACAAGTCCGACGTATGGTGGCTGCGCAAGAAGGTGCCGGC
CCGATACCGGGCGATCGTCGGCCGGGGTGAGGTCTGGCGGTCTTTGGGGACGACCGACCTCAAGGCCGCGAATGTCGCCT
GCGTCAAGCTAAGCGCCGAACTGGAGCGAGACTGGGCCGCACGCCTCCACGCCGCGCAGGACGCCGGTCGGGTCTCCTCG
CCTCGCGCCCTCACCTCCCGCGAACTGAGCGGATTGCAGCGACTCGTCCACGAACAGACGCGGGACGCGCAGCTTGCCAA
TCCGCCGCCCCGGCACGCCTGGGGGCTCGACACGGGAGATCGGACCGACGACGAGCATCTCGAAGAACTGGAATACGACG
AGGCCAAGATGGCCTCTTTCCTCGCCCGGAACGGCTTCGAGGTGAGCGAGGCGGACCAGCGGCGTTTTCTGCCCCTATTC
CTACAGGCGCGTCGGGAAGCCTACCGGGATCTGCATCGGGCGACCCGCTTGGACTATTCGGACTCTCCCCTGCTCGCAAA
GTACGCGCCAACTCCGTTACCTTCGGTCGACTTCCTCGAAGCTTTCGAATTCTATTGTACATCCGCCGGGATCAAGGGCG
GGGCGACGGGTCCTACCGCCAGACGGTGGCGATCGAAAATCATAGAGTTCTGCGAGTTCGTCAATCACGCCGACCTGGCA
CGCATGACGGCGGACGACGGCTATCGTTGGGTCGATCACCTGGTCGACGCCAAGGGTATCGCCCGAAAATCCGTGCGGGA
CGTTTGGCTCGCCTCCCTGAAGGCAGTCGCAAGCTTCATAGTTGAACGCCGGAAACTCGCCAGCAATCCGTTTCTGGGCA
TTCGCGTCCGACGCGCCGATACGGGAACGAAGGAATCCAATCAAAAGGGATTTACCGATTCCCAGGCTGTCTTAATCCTA
ACGGCCACGCTCGCAAACCCCTCGCATCTGACCATCGCCGAGACCCGCGCGGCGCGGCGGTGGGTGCCATGGATCTGCGC
CTACACGAGCGCCCGCGTCAACGAGATCACTTCGCTCCTCCCCTCCGACGTAAGACAAGATCCAGAGACGGCGATCTGGT
GCTTCTATCTACGCCCCGAGATGACCAAGGGGGACTACATGCGGGTGATACCGGTCCACTCTCATCTGATCGAACAGGGA
CTGCTGAATTACGTCGGAGAGCGCGAGGGCTTGTCGCTACCCCTGTTTTATGATCCGCGAAGGGCAGAGGGCGATACGGT
GGCTCATCCGCAATGGCAGAAGATCGCCCAGCGGCTCGCGGAGTGGGTCGTCAACAGTCTTGGCGTTACGGGGGTCAAGC
CCAATCACGGTTGGCGCCACCGCTTCAAAAGCGTAGCCCGTCACGCGAATATGCATCCCGAAGTCGAGAATTTCATTACG
GGCCATGGGGGCTCCGACGATCCGGGCGTCATCCAACGCGTGAGCATGCGGTACGGCGACGCTTGGGTGAAAACGCTCAA
GAAGACGATCGAGCTCTACCCCCGCTACGAAATTGAAGGCCTAAAGAGGAGGCCGGAGCCGCATCGCCGACCGCGGCGTA
CCCGCCAGATCGGGGCACCCGGGACAAGGCAAGCATCGACAGCGACGGGGCATGCAAGTCATCGAGACCCGGAGTGA

Upstream 100 bases:

>100_bases
TTCGCCTAAGCCACTGATGGTTCGAATTTTATCCGTGAAATAAGGCGTTCTTCCATGACTTGGGGCTACACCAAGGGGCT
CCACCATGGGAAATCCGAAA

Downstream 100 bases:

>100_bases
TGCGATGCGGCCGCACCTTATCGAGACCTACTTCGATTATTCATGTCATTACATTCCGAGAAGTTACCGTCGGTCGAGAA
CAGCCATTTTGAAGTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase Domain-Containing Protein; Phage Integrase Family Recombinase Protein; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Domain Protein SAM Domain Protein

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MPSPVRKRSADGSDKSDVWWLRKKVPARYRAIVGRGEVWRSLGTTDLKAANVACVKLSAELERDWAARLHAAQDAGRVSS
PRALTSRELSGLQRLVHEQTRDAQLANPPPRHAWGLDTGDRTDDEHLEELEYDEAKMASFLARNGFEVSEADQRRFLPLF
LQARREAYRDLHRATRLDYSDSPLLAKYAPTPLPSVDFLEAFEFYCTSAGIKGGATGPTARRWRSKIIEFCEFVNHADLA
RMTADDGYRWVDHLVDAKGIARKSVRDVWLASLKAVASFIVERRKLASNPFLGIRVRRADTGTKESNQKGFTDSQAVLIL
TATLANPSHLTIAETRAARRWVPWICAYTSARVNEITSLLPSDVRQDPETAIWCFYLRPEMTKGDYMRVIPVHSHLIEQG
LLNYVGEREGLSLPLFYDPRRAEGDTVAHPQWQKIAQRLAEWVVNSLGVTGVKPNHGWRHRFKSVARHANMHPEVENFIT
GHGGSDDPGVIQRVSMRYGDAWVKTLKKTIELYPRYEIEGLKRRPEPHRRPRRTRQIGAPGTRQASTATGHASHRDPE

Sequences:

>Translated_558_residues
MPSPVRKRSADGSDKSDVWWLRKKVPARYRAIVGRGEVWRSLGTTDLKAANVACVKLSAELERDWAARLHAAQDAGRVSS
PRALTSRELSGLQRLVHEQTRDAQLANPPPRHAWGLDTGDRTDDEHLEELEYDEAKMASFLARNGFEVSEADQRRFLPLF
LQARREAYRDLHRATRLDYSDSPLLAKYAPTPLPSVDFLEAFEFYCTSAGIKGGATGPTARRWRSKIIEFCEFVNHADLA
RMTADDGYRWVDHLVDAKGIARKSVRDVWLASLKAVASFIVERRKLASNPFLGIRVRRADTGTKESNQKGFTDSQAVLIL
TATLANPSHLTIAETRAARRWVPWICAYTSARVNEITSLLPSDVRQDPETAIWCFYLRPEMTKGDYMRVIPVHSHLIEQG
LLNYVGEREGLSLPLFYDPRRAEGDTVAHPQWQKIAQRLAEWVVNSLGVTGVKPNHGWRHRFKSVARHANMHPEVENFIT
GHGGSDDPGVIQRVSMRYGDAWVKTLKKTIELYPRYEIEGLKRRPEPHRRPRRTRQIGAPGTRQASTATGHASHRDPE
>Mature_557_residues
PSPVRKRSADGSDKSDVWWLRKKVPARYRAIVGRGEVWRSLGTTDLKAANVACVKLSAELERDWAARLHAAQDAGRVSSP
RALTSRELSGLQRLVHEQTRDAQLANPPPRHAWGLDTGDRTDDEHLEELEYDEAKMASFLARNGFEVSEADQRRFLPLFL
QARREAYRDLHRATRLDYSDSPLLAKYAPTPLPSVDFLEAFEFYCTSAGIKGGATGPTARRWRSKIIEFCEFVNHADLAR
MTADDGYRWVDHLVDAKGIARKSVRDVWLASLKAVASFIVERRKLASNPFLGIRVRRADTGTKESNQKGFTDSQAVLILT
ATLANPSHLTIAETRAARRWVPWICAYTSARVNEITSLLPSDVRQDPETAIWCFYLRPEMTKGDYMRVIPVHSHLIEQGL
LNYVGEREGLSLPLFYDPRRAEGDTVAHPQWQKIAQRLAEWVVNSLGVTGVKPNHGWRHRFKSVARHANMHPEVENFITG
HGGSDDPGVIQRVSMRYGDAWVKTLKKTIELYPRYEIEGLKRRPEPHRRPRRTRQIGAPGTRQASTATGHASHRDPE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63224; Mature: 63093

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPVRKRSADGSDKSDVWWLRKKVPARYRAIVGRGEVWRSLGTTDLKAANVACVKLSAE
CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEHHH
LERDWAARLHAAQDAGRVSSPRALTSRELSGLQRLVHEQTRDAQLANPPPRHAWGLDTGD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RTDDEHLEELEYDEAKMASFLARNGFEVSEADQRRFLPLFLQARREAYRDLHRATRLDYS
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DSPLLAKYAPTPLPSVDFLEAFEFYCTSAGIKGGATGPTARRWRSKIIEFCEFVNHADLA
CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH
RMTADDGYRWVDHLVDAKGIARKSVRDVWLASLKAVASFIVERRKLASNPFLGIRVRRAD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
TGTKESNQKGFTDSQAVLILTATLANPSHLTIAETRAARRWVPWICAYTSARVNEITSLL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSDVRQDPETAIWCFYLRPEMTKGDYMRVIPVHSHLIEQGLLNYVGEREGLSLPLFYDPR
HHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
RAEGDTVAHPQWQKIAQRLAEWVVNSLGVTGVKPNHGWRHRFKSVARHANMHPEVENFIT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCC
GHGGSDDPGVIQRVSMRYGDAWVKTLKKTIELYPRYEIEGLKRRPEPHRRPRRTRQIGAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHCCCC
GTRQASTATGHASHRDPE
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSPVRKRSADGSDKSDVWWLRKKVPARYRAIVGRGEVWRSLGTTDLKAANVACVKLSAE
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEHHH
LERDWAARLHAAQDAGRVSSPRALTSRELSGLQRLVHEQTRDAQLANPPPRHAWGLDTGD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RTDDEHLEELEYDEAKMASFLARNGFEVSEADQRRFLPLFLQARREAYRDLHRATRLDYS
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DSPLLAKYAPTPLPSVDFLEAFEFYCTSAGIKGGATGPTARRWRSKIIEFCEFVNHADLA
CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH
RMTADDGYRWVDHLVDAKGIARKSVRDVWLASLKAVASFIVERRKLASNPFLGIRVRRAD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
TGTKESNQKGFTDSQAVLILTATLANPSHLTIAETRAARRWVPWICAYTSARVNEITSLL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSDVRQDPETAIWCFYLRPEMTKGDYMRVIPVHSHLIEQGLLNYVGEREGLSLPLFYDPR
HHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
RAEGDTVAHPQWQKIAQRLAEWVVNSLGVTGVKPNHGWRHRFKSVARHANMHPEVENFIT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCC
GHGGSDDPGVIQRVSMRYGDAWVKTLKKTIELYPRYEIEGLKRRPEPHRRPRRTRQIGAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHCCCC
GTRQASTATGHASHRDPE
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA