Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747315

Identifier: 86747315

GI number: 86747315

Start: 208007

End: 209626

Strand: Direct

Name: 86747315

Synonym: RPB_0189

Alternate gene names: NA

Gene position: 208007-209626 (Clockwise)

Preceding gene: 86747311

Following gene: 86747316

Centisome position: 3.9

GC content: 66.36

Gene sequence:

>1620_bases
ATGACGAATGTCGAACGCGATCCCCCGATGACGGCCGAAACACGGGCGTCCCCCTGGATCGCGTTCCGCCACACCGCCTT
TACGGTGGTCTGGACCGCAACCGTCGTCGCCAACGTCGGCACCTGGATGTACAACGCGGCATCCGGCTGGCTGATGACGA
GCCTGGAAGCCGATCCACTGACCGTTTCGCTCGTTCAAGTCGCGTCCAGCCTTCCGATGTTCCTGTTCGCGATCCCGGCC
GGCGCGCTGGCGGACATCGTCGACAAGCGGCGCTTCCTGATCCTGATCGAGATCGTGCTCACCGTGTTTGCGGCCGCGAG
CGCGGTGCTGGTCTGGCTCGGGCTGATGAACCCGTTCCAGCTGTTGCTGTTCACGTTTCTGCTCGGCGCGGGTGCGGCGT
TCGCGGCGCCGGCCTGGCAATCGATCGTGCCGGATCTCGTGCCCAAGGAGCACCTCGCATCGGCGGTGGCGAGCAATGGC
GTCGGCATCAATGTCAGCCGGGCGATCGGCCCGGCGCTGGGCGGCGTGGTGATCGGCGTCGCGGGCATCGCGGCGCCGTT
CTGGATCAACGCGCTGAGCAATTTCGCGGTGATCGGCGCGCTGCTGTGGTGGCGCCCCGCCGCCAAGCGCGCGGCGACGC
TGCCTCCGGAACGGTTGTTCAGCGCGATCGTGATCGGCTTTCGCCACGCGCGATACAATCTCGATCTGCGCGCCACACTG
GTGCGCGCGGTCGCGTTCTTCTTTTTCGCCAGCGCGTATTGGGCGCTGCTGCCGCTTGTCGCCCGCTCGCGCATCGCCGG
GGGACCGGAACTGTACGGCATTTTGCTCGGCGCAATCGGCCTCGGCGCGATTGTCGGCGCGTTCCTGTTGCAGGGGTTGA
AATCGGCGCTGGGGCCGGATCGCTTGGTCGCGGCCGGCACGCTCGGGACAGCGGTCAGCCTCGTTCTGCTCGGCAGCGTC
CAACGCGTCGAACTCGCGACCGCGGCCTGTTTCATCGCGGGCGTTTCGTGGATCGCGGTTCTCGCCAACCTCAACGTTTC
CGTTCAGGTCGCGCTACCGGACTGGGTGCGCGGCCGCGGCCTGGCGATGTTCGTCACGGTGTTCTTCGGCGCGATGACGG
CCGGCAGCGCGCTCTGGGGTCAGTTGGCGTCGTCGTTCGGATTGCCGGCAGCGCATTTCGCCGCGGCCGTCGGCGCCGTC
GTCGGCATCGCCGTGACGTGGCGCTGGAAACTGCGCGGCAGCGCCGAGCACGATCTCGCACCCTCGATGCATTGGCCCGC
GCCGGTGCTGGCCATCGATGCCGATGCCGATCAAGGCCCGGTGCTGATTACGGTCGAGTACCATGTCGCAGCGGACAGGC
GCGACGCCTTCCTGCTGGCTATGCGAAAATTGAGCCGACAGCGACGGCGTGACGGCGCATATGCGTGGGACGTGTTCGAA
GATACCTCGGAGCGCGGACGATTCGTCGAGGTGTTCAAAGTTGCGTCATGGCTCGAGCATCTTCGGCAACATGATCGCGT
CACCAATGCGGATCGGATCGATCAGAATGCGATCCGCCATTTCCACGCGAGCGCAGAGCCTCGCGTGACGCACTTGCTCG
CTGCGAAGTTCCCGGCATGA

Upstream 100 bases:

>100_bases
ACCCTGCAATCCCCGCCGCCCCCGCCCGGATAGTCTGTCTCGGATCCGTCTCCGTCGCGCCGGATACCCCGTCTCGCTCA
TCCAACCGATCGAGGACCAG

Downstream 100 bases:

>100_bases
CTCCGGGCAAGCTGCGCGCGCCGTGACCGCCGCTCAAACCCGACCTCGGCCGGCCGATCGAGGCGCGTCTCGAGCCCGAG
CGGCTTGTGGAGGCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: MFS Permease; Facilitator Superfamily Protein; MFS Family Transporter; MFS Transporter; Facilitator Superfamily; Integral Membrane Efflux Protein; Transport Transmembrane Protein; Facilitator Superfamily Permease; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; Multidrug ABC Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; Macrolide-Efflux Protein; Permease Of Facilitator Superfamily; Dioxygenase; MFS Family Diterpenoid Transporter

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MTNVERDPPMTAETRASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPLTVSLVQVASSLPMFLFAIPA
GALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQLLLFTFLLGAGAAFAAPAWQSIVPDLVPKEHLASAVASNG
VGINVSRAIGPALGGVVIGVAGIAAPFWINALSNFAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATL
VRAVAFFFFASAYWALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPDRLVAAGTLGTAVSLVLLGSV
QRVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRGLAMFVTVFFGAMTAGSALWGQLASSFGLPAAHFAAAVGAV
VGIAVTWRWKLRGSAEHDLAPSMHWPAPVLAIDADADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFE
DTSERGRFVEVFKVASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKFPA

Sequences:

>Translated_539_residues
MTNVERDPPMTAETRASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPLTVSLVQVASSLPMFLFAIPA
GALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQLLLFTFLLGAGAAFAAPAWQSIVPDLVPKEHLASAVASNG
VGINVSRAIGPALGGVVIGVAGIAAPFWINALSNFAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATL
VRAVAFFFFASAYWALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPDRLVAAGTLGTAVSLVLLGSV
QRVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRGLAMFVTVFFGAMTAGSALWGQLASSFGLPAAHFAAAVGAV
VGIAVTWRWKLRGSAEHDLAPSMHWPAPVLAIDADADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFE
DTSERGRFVEVFKVASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKFPA
>Mature_538_residues
TNVERDPPMTAETRASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPLTVSLVQVASSLPMFLFAIPAG
ALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQLLLFTFLLGAGAAFAAPAWQSIVPDLVPKEHLASAVASNGV
GINVSRAIGPALGGVVIGVAGIAAPFWINALSNFAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATLV
RAVAFFFFASAYWALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPDRLVAAGTLGTAVSLVLLGSVQ
RVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRGLAMFVTVFFGAMTAGSALWGQLASSFGLPAAHFAAAVGAVV
GIAVTWRWKLRGSAEHDLAPSMHWPAPVLAIDADADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFED
TSERGRFVEVFKVASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKFPA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57744; Mature: 57613

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVERDPPMTAETRASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPL
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
TVSLVQVASSLPMFLFAIPAGALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQ
HHHHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLLFTFLLGAGAAFAAPAWQSIVPDLVPKEHLASAVASNGVGINVSRAIGPALGGVVIGV
HHHHHHHHHCCCHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
AGIAAPFWINALSNFAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
VRAVAFFFFASAYWALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLVAAGTLGTAVSLVLLGSVQRVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRG
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCC
LAMFVTVFFGAMTAGSALWGQLASSFGLPAAHFAAAVGAVVGIAVTWRWKLRGSAEHDLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCC
PSMHWPAPVLAIDADADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFE
CCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHH
DTSERGRFVEVFKVASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKFPA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TNVERDPPMTAETRASPWIAFRHTAFTVVWTATVVANVGTWMYNAASGWLMTSLEADPL
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
TVSLVQVASSLPMFLFAIPAGALADIVDKRRFLILIEIVLTVFAAASAVLVWLGLMNPFQ
HHHHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLLFTFLLGAGAAFAAPAWQSIVPDLVPKEHLASAVASNGVGINVSRAIGPALGGVVIGV
HHHHHHHHHCCCHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
AGIAAPFWINALSNFAVIGALLWWRPAAKRAATLPPERLFSAIVIGFRHARYNLDLRATL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
VRAVAFFFFASAYWALLPLVARSRIAGGPELYGILLGAIGLGAIVGAFLLQGLKSALGPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLVAAGTLGTAVSLVLLGSVQRVELATAACFIAGVSWIAVLANLNVSVQVALPDWVRGRG
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCC
LAMFVTVFFGAMTAGSALWGQLASSFGLPAAHFAAAVGAVVGIAVTWRWKLRGSAEHDLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCC
PSMHWPAPVLAIDADADQGPVLITVEYHVAADRRDAFLLAMRKLSRQRRRDGAYAWDVFE
CCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHH
DTSERGRFVEVFKVASWLEHLRQHDRVTNADRIDQNAIRHFHASAEPRVTHLLAAKFPA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA