Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610191

Identifier: 86610191

GI number: 86610191

Start: 2863171

End: 2865693

Strand: Direct

Name: 86610191

Synonym: CYB_2765

Alternate gene names: NA

Gene position: 2863171-2865693 (Clockwise)

Preceding gene: 86610190

Following gene: 86610192

Centisome position: 93.98

GC content: 56.56

Gene sequence:

>2523_bases
ATGTGGTCTAGGGTTACTTCGCGTCGTGTTGCCCAATCAATTGCGGTGCTAGTTTTTGGTTTGGTGCTTTTGGTTTCTCT
TCAAGGGTTCGGCTCCAGAAGAACTCTTTTGCCAATACTTACACCTGTGCCCACACCGACCCCGACTTCAACACCCACAG
CCACGCCAACACCGACGCCCACGCCGGGAGGCTGTGATCCCAACGCCAACCTGATCCCAGTTGGCACTGTCCAGGGCACT
GGCTTCACTTCCCCCCTGGTGAACCAAACAGTCACGGTTTCTGGAATCGTAGTAGGAGACTTTGAAAATGAGGGGGTGGC
TGGCCAAACCTATCTCCAGGGCTACTACCTACAAGATGATGGTGACGGGAATCCCGCCACATCAGATGGCATCTTCGTTT
TCAGTGGCACAGCTAATAACGTCAGGCTTGGGGATAGGGTTCAGGTGACCGGAACGGTTGCTGAGTTCCGCCAGCAAACC
CAGCTCTCCAACGTCACCAGCTTTACTGTCTGTAGCTCTGACAATCCGTTGCCGGCCCCAGTGCAGATCTCTCTACCGCT
GACTGCGGAGCAAAGGGAAGCTCTGGAAGGAATGCTGGTCACATTTGGAAATCAGCCCCTGTTTGTAAGCGACTCCTTCT
TGCTGGGACGCCACGGGGAGCTGAGTGTGGCCACAGAGCGGTTGTTCACTCCTACGCAAATTGCGGCTCCCAGCCAGGCA
GCTGCCATTCAAGCGGAAAACGACCGAAAGCGGATTCGCATTGATGACCGGCTGCTCACCCAAAACCCAGATCCGGTTAT
CTACCCCACTCCGGGTGGCCTGAGCGCGGCTAACACTGTGCGCGGCGGCGATCGCGTCAGCAACATCACCGGGATCATGA
CCCAGTTGCGAGGCCGGAATGTCAGTGGCGATGTGGATGCGACCATCGACTACCGTATCCACCCCAATGATCCCAACAAC
TTGCCCAGGTTTACAGCCACCAACCCTCGCCCGCAAAACCCACCCTCAGTAGGGGGCTCCCTGAGGGTAGCTAGCTTTAA
CCTGTTCAACTACTTCAACACCTTTGGCAACGCCTGCTTCCCCAATAACTCCTCCTGTCAGGGAGCCAGCAACGCCACCG
AGTTCACCCGCCAGCGGGATAAGCTCATCGAGGCTATTCGCCGCATGGATGCCGATATCGTAGGCCTCAACGAGTTAGAA
AACGATGGATACGGTTCGAATAGTTCCATTCAGGATTTGGTGAACGGGCTCAACCAGGTCATGGGGGCAGGAACCTACGC
CTTTGTGAATGTTGGAGTGCCCAACCTGGGCGGCGATGCCATCACCAACGGCTTTATCTACAAGCCAGCTACGGTTGAAA
TTGCCCCCGGCACTAACCCGGCCTTCCTGGACACAGGGGAATTCACCCAAGGCCCCGGACGCTTCCATCGTCCTCCTCTG
GCTGTAACCTTCCGGCAGCGGAGCAACAACGCCACCTTCACTGTTGTGGTCAACCACTTCAAGTCCAAGGTTTCTCCCTG
CGATCCTATTGACAACGATCCCTTCCAAGGCAATTGCAACGGCAACCGCACCCGGGCCGCTCAGCAACTCTTGAGCTGGC
TCGCCACCAATCCAACTGGCTCCACCGATCCGGATGTGTTGATTATGGGGGATCTCAACTCCTACGCTATGGAGGATCCG
ATCAAAACTCTGGAGGCGGGCGGGTTCATCAACCTCAATGGCCCCAACAGCTACTCCTTTAGCTTCCAAGGACAGTGGGG
ATCTCTGGATCATGCCCTGGCCAACAGCAGTCTGAGACCCCAAGTTACAGGCTCAGCTAAGTGGCACATCAACGCTGATG
AGCCCGTGAGCTTGGACTACACCCTGAGCTTCAAGAGTCCCTCTCAGCAGAGCCTCTTCTACGCCAGCGATCCCTTCCGC
TCTTCCGACCACGATCCGGTGCTCGTTGGCTTGAACCTGACTCCGGCCCCAACACCGACACCGACGCCCACACCGACACC
AACTCCTCCTTCCGTTAACCTGCCTTTGACTGAAGGCTTTGATAACTGCAACCCTGCTCCAGCCGGCTGGCAGATTGTGG
ATGTGGACGGCGACACCAGTCGTTCCTGGCGTTGTGTCAACTCCCTTGCCGAGGCCAACGCTTTCAACGGTCAGCAACCG
GGTAATGACTGGCTGATCACTCCTCCTCTGAACCTGGCTTCCGTCAGCAACCCAGTTCTGACCTTCCGCAATCGGAGTTC
TTTTAGAGATAACGGCCTTCCTCCTTCGCAACAACTAAGCGTTCTTTACTCCACCAACTACAGCGGTGCAGGCACTCCAG
CGGCAGTGAATGCAGCCACTTGGACTGCTCTGACGATTCCCACTCTCTCTACGGGCAGCTTCGTCAACTCCGGCCCGATT
TCTCTGGCTGGGATCCAGCCTTCCAACCGTGTTTACATTGCCTTCCGCTATCGCTCTTCTGGTACAGCTTCCGGCTCGGC
CACTCGCTGGCGGGTGGATAGTGTCAACATCTCCGGGAACTAG

Upstream 100 bases:

>100_bases
TACCTTAACTGCCCCTTTACTCAGATTCCTTCCTGAAGATGGTGTCCATATAGACGGTAAAAATACGGGATCCTTTGAAG
TTTCGGGAGGAGTGAAGCAG

Downstream 100 bases:

>100_bases
GTGTGGGATCCTAGTGCCAACCTGAGTCTGATTGGCAGTGGCTGGGAAAGTGGATCTGCTTCCTCAGCCGTAACGCTCTC
CTATGTGGTCTTGGCCGGGA

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase Family; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; PKD Domain-Containing Protein; Alkaline Phosphatase; Large Secreted Protein; Exported Nuclease; Outer Membrane Adhesin Like Proteiin; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Endonuclease I; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; PKD Domain Containing Protein; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT
GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT
QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA
AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN
LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE
NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL
AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP
IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR
SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP
GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI
SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN

Sequences:

>Translated_840_residues
MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT
GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT
QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA
AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN
LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE
NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL
AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP
IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR
SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP
GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI
SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN
>Mature_840_residues
MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT
GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT
QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA
AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN
LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE
NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL
AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP
IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR
SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP
GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI
SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN

Specific function: Unknown

COG id: COG2374

COG function: function code R; Predicted extracellular nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89592; Mature: 89592

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
TPGGCDPNANLIPVGTVQGTGFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDD
CCCCCCCCCCEEEEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC
GDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQTQLSNVTSFTVCSSDNPLPAP
CCCCCCCCCCEEEEECCCCCEEECCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC
VQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA
EEEEECCCHHHHHHHCCEEEEECCCEEEEECCEEECCCCCEEEHHHHCCCCHHHCCCCCC
AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRN
EEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VSGDVDATIDYRIHPNDPNNLPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACF
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCC
PNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELENDGYGSNSSIQDLVNGLNQV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHH
MGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL
HCCCCEEEEEECCCCCCCHHHCCCEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCE
AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTG
EEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
STDPDVLIMGDLNSYAMEDPIKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRP
CCCCCEEEEECCCCHHHHCCHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCC
QVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFRSSDHDPVLVGLNLTPAPTPT
EECCCEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC
PTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAAT
CCCEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCEECCEE
WTALTIPTLSTGSFVNSGPISLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN
EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
TPGGCDPNANLIPVGTVQGTGFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDD
CCCCCCCCCCEEEEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC
GDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQTQLSNVTSFTVCSSDNPLPAP
CCCCCCCCCCEEEEECCCCCEEECCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC
VQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA
EEEEECCCHHHHHHHCCEEEEECCCEEEEECCEEECCCCCEEEHHHHCCCCHHHCCCCCC
AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRN
EEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VSGDVDATIDYRIHPNDPNNLPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACF
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCC
PNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELENDGYGSNSSIQDLVNGLNQV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHH
MGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL
HCCCCEEEEEECCCCCCCHHHCCCEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCE
AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTG
EEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
STDPDVLIMGDLNSYAMEDPIKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRP
CCCCCEEEEECCCCHHHHCCHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCC
QVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFRSSDHDPVLVGLNLTPAPTPT
EECCCEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC
PTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAAT
CCCEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCEECCEE
WTALTIPTLSTGSFVNSGPISLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN
EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA