Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610173

Identifier: 86610173

GI number: 86610173

Start: 2842241

End: 2842738

Strand: Direct

Name: 86610173

Synonym: CYB_2747

Alternate gene names: NA

Gene position: 2842241-2842738 (Clockwise)

Preceding gene: 86610172

Following gene: 86610174

Centisome position: 93.29

GC content: 60.44

Gene sequence:

>498_bases
ATGCTGATAGATGCTGCCTATGGGGTGATCCCCATCCTGCCCCACCCACCCGCCCAGGAAGCTCCCGGACCCGGCTCTTC
GCATTTGTATCTGCTCATCCAGCACCAGAAGGGGCATTGGGCTTTCCCAAAAGGGCACAAGGATAGCTCCGAAAGCGACC
TGGAGGCGGCGCAGCGAGAATTGCGAGAGGAAACCGGCTTGACCGACTACCAGCTTCTGACCCTGCCCGGCCAGTCTGAC
CCTTTGACGCTGCAGGAAGCCTACACCTTTACGGATCCCGAGGGGAACCGAGTGGCCAAAACCGTTACCTACTACGTGGC
CTTGCTGCCGCCCCAATTTCCTCCTCCGGCCCTGCAGGTGCAACCGGAGGAGGTGGCCGCCTACCGCTGGTGCTCCTACC
CCGAAGCCTTGGAGCAGATCAGCTTTGAAGAAAGTCGGCAACTGCTGCGCCGCTGCCAAGCCCACCTGGAGCAGCTTTGG
AAATTGGAGAAGACCTAA

Upstream 100 bases:

>100_bases
CTCTCGCCCCTGCAGGGGGTAGAGCGCCCGCAGGTGGATCCCAACGAGGTCTTCGCTCCTAAGCCGCCAGCCATCAAACT
CTTTGGAGATTAGCTCCCCA

Downstream 100 bases:

>100_bases
GTTCCGTATTTTTACGGAAGAGGTTTATCGGGGTTACCTTTATTATCTTGTCCTGCAGGCTTTCCGTGGGAAGTTCCCGA
GTAAGAAAGCCAGCAGACAA

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: DGTP Pyrophosphohydrolase MutT; Pyrophosphohydrolase; NUDIX Hydrolase

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD
PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW
KLEKT

Sequences:

>Translated_165_residues
MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD
PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW
KLEKT
>Mature_165_residues
MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD
PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW
KLEKT

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18675; Mature: 18675

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRE
CEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LREETGLTDYQLLTLPGQSDPLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQV
HHHHCCCCCEEEEEECCCCCCEEHHHEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCEE
QPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLWKLEKT
CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRE
CEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LREETGLTDYQLLTLPGQSDPLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQV
HHHHCCCCCEEEEEECCCCCCEEHHHEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCEE
QPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLWKLEKT
CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA