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The map label for this gene is fni [H]

Identifier: 86610118

GI number: 86610118

Start: 2777873

End: 2779012

Strand: Direct

Name: fni [H]

Synonym: CYB_2691

Alternate gene names: 86610118

Gene position: 2777873-2779012 (Clockwise)

Preceding gene: 86610116

Following gene: 86610123

Centisome position: 91.18

GC content: 60.96

Gene sequence:

>1140_bases
ATGCTGTTCGCTTTTGGCAGCGCGCGGCGTTATAGACTGACAATCTCTACCAAGACCAAGGTGCTCCGCACTGCTGACAT
GATGGCCGATTCTCTACCCCCCATTTCCGAGCGCAAACAGGATCACCTGGACATTGTTCTGCAGCAGGATGTGGCTGCCA
AAGGGATCCGCACCGGCTTTGAGCGGTTTTTCTTTGAGCATGTGGCGCTGCCGGAGCTGCTGTTGCCGGAGATCGACCTA
AGCTGCGAATTCTTGGGAAAACGCCTACAGGCACCCCTGCTCATCAGCAGCATGACGGGGGGAACAGAGGCTGCCCATGA
GCTAAACCGACAACTGGCCGCCGCTGCCCAACAGTTGGGCATTGCCATGGGGGTGGGATCCCAGCGGGCAGCTTTGGAAC
ATCCAGAGCTGGCCCGGACTTACCAGGTGCGCCAAGTGGCCCCGAATATTTTGCTGCTGGCCAACCTGGGTGCCGTTCAG
CTCAACTACGGCTATGGGTTGGAGCAGGCGCGACGGGCGGTGGAGATGATCGAGGCGGATGCATTGATTCTGCACCTCAA
TCCTCTCCAGGAGGCGGTTCAACCCCAAGGGGATCCCGACTGGCGTGGATTGTATGGCCGCATCGAACAGTTGGTGGCGC
AGTTGCCGGTGCCCGTGGTGGTGAAGGAAGTGGGCAATGGCCTCAGTGCTAAGGTAGCCCAGCGGCTGGCCGAATGCGGT
GTGGCGGCCCTAGATGTGGCGGGAGCGGGCGGCACCAGTTGGAGCGAGGTGGAGGCCCATCGCCAACCAGATGCTCTCAA
GAAACGCATCGCCCACAGCTTTAGGGATTGGGGGATCCCAACGGCTTTGTCCCTGCTGGAAATTCGTCGCCTGCTGCCGG
ACTTACCCCTGGTGGCCAGCGGTGGCATCCGCAATGGCATCGACGCGGCCAAAGCTATCCGTCTGGGAGCCGATGTGGTG
GGTATGGCCGCCCCCGCTTTACACGCCGTCTCCCAAGGACAGATGCAGGCGGTGGTGGACACCTTTCGTGCCGTGATCGA
GGAGCTACGTATTGCTGCCTTTTGCACCGGATCGGCCAACTTGGCCCGGCTGCGACAAGCTACTCTGCGGCGGCAGGATA
CCTGGGATCCCTTGCCCTAA

Upstream 100 bases:

>100_bases
CGCGACAGTGCTATGCCTCCGGCACCCTACCGGGAACCGCACTGCTGTCCCAGTAGATAGCGAGTCACCTTGGACTCCGT
CCCGCTAGCGCGAACGGGCA

Downstream 100 bases:

>100_bases
ACTCCAAGCACTTGCCACAAACTGAGGGTCAATACCAGAGCCCCCAGATGATAGGGCCACTGTATGCTTTGTCGAGATGC
TTTGTCGAGATGCTTTGTCG

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLFAFGSARRYRLTISTKTKVLRTADMMADSLPPISERKQDHLDIVLQQDVAAKGIRTGFERFFFEHVALPELLLPEIDL
SCEFLGKRLQAPLLISSMTGGTEAAHELNRQLAAAAQQLGIAMGVGSQRAALEHPELARTYQVRQVAPNILLLANLGAVQ
LNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVAQLPVPVVVKEVGNGLSAKVAQRLAECG
VAALDVAGAGGTSWSEVEAHRQPDALKKRIAHSFRDWGIPTALSLLEIRRLLPDLPLVASGGIRNGIDAAKAIRLGADVV
GMAAPALHAVSQGQMQAVVDTFRAVIEELRIAAFCTGSANLARLRQATLRRQDTWDPLP

Sequences:

>Translated_379_residues
MLFAFGSARRYRLTISTKTKVLRTADMMADSLPPISERKQDHLDIVLQQDVAAKGIRTGFERFFFEHVALPELLLPEIDL
SCEFLGKRLQAPLLISSMTGGTEAAHELNRQLAAAAQQLGIAMGVGSQRAALEHPELARTYQVRQVAPNILLLANLGAVQ
LNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVAQLPVPVVVKEVGNGLSAKVAQRLAECG
VAALDVAGAGGTSWSEVEAHRQPDALKKRIAHSFRDWGIPTALSLLEIRRLLPDLPLVASGGIRNGIDAAKAIRLGADVV
GMAAPALHAVSQGQMQAVVDTFRAVIEELRIAAFCTGSANLARLRQATLRRQDTWDPLP
>Mature_379_residues
MLFAFGSARRYRLTISTKTKVLRTADMMADSLPPISERKQDHLDIVLQQDVAAKGIRTGFERFFFEHVALPELLLPEIDL
SCEFLGKRLQAPLLISSMTGGTEAAHELNRQLAAAAQQLGIAMGVGSQRAALEHPELARTYQVRQVAPNILLLANLGAVQ
LNYGYGLEQARRAVEMIEADALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVAQLPVPVVVKEVGNGLSAKVAQRLAECG
VAALDVAGAGGTSWSEVEAHRQPDALKKRIAHSFRDWGIPTALSLLEIRRLLPDLPLVASGGIRNGIDAAKAIRLGADVV
GMAAPALHAVSQGQMQAVVDTFRAVIEELRIAAFCTGSANLARLRQATLRRQDTWDPLP

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 41119; Mature: 41119

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAFGSARRYRLTISTKTKVLRTADMMADSLPPISERKQDHLDIVLQQDVAAKGIRTGF
CEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
ERFFFEHVALPELLLPEIDLSCEFLGKRLQAPLLISSMTGGTEAAHELNRQLAAAAQQLG
HHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
IAMGVGSQRAALEHPELARTYQVRQVAPNILLLANLGAVQLNYGYGLEQARRAVEMIEAD
HHHCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHC
ALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVAQLPVPVVVKEVGNGLSAKVAQRLAECG
EEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCC
VAALDVAGAGGTSWSEVEAHRQPDALKKRIAHSFRDWGIPTALSLLEIRRLLPDLPLVAS
CCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEC
GGIRNGIDAAKAIRLGADVVGMAAPALHAVSQGQMQAVVDTFRAVIEELRIAAFCTGSAN
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
LARLRQATLRRQDTWDPLP
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFAFGSARRYRLTISTKTKVLRTADMMADSLPPISERKQDHLDIVLQQDVAAKGIRTGF
CEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
ERFFFEHVALPELLLPEIDLSCEFLGKRLQAPLLISSMTGGTEAAHELNRQLAAAAQQLG
HHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
IAMGVGSQRAALEHPELARTYQVRQVAPNILLLANLGAVQLNYGYGLEQARRAVEMIEAD
HHHCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHC
ALILHLNPLQEAVQPQGDPDWRGLYGRIEQLVAQLPVPVVVKEVGNGLSAKVAQRLAECG
EEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCC
VAALDVAGAGGTSWSEVEAHRQPDALKKRIAHSFRDWGIPTALSLLEIRRLLPDLPLVAS
CCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEC
GGIRNGIDAAKAIRLGADVVGMAAPALHAVSQGQMQAVVDTFRAVIEELRIAAFCTGSAN
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
LARLRQATLRRQDTWDPLP
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]