Click here to switch to the map view.

The map label for this gene is 86610116

Identifier: 86610116

GI number: 86610116

Start: 2775856

End: 2776917

Strand: Direct

Name: 86610116

Synonym: CYB_2690

Alternate gene names: NA

Gene position: 2775856-2776917 (Clockwise)

Preceding gene: 86610115

Following gene: 86610118

Centisome position: 91.11

GC content: 60.08

Gene sequence:

>1062_bases
ATGTTCAGAGCCCACGACTCTGCCGGTTTGCGCCTTTTGATTGCGGTTGCCCTGTTGCTGGGGAGCATGGCCAGCTGGCG
GCAGGATCGTCTTTTGGCAGTGATGGGCCTGGTGGGTGCAGCCGCCATCTCTGCCTTTACCCGTCCGGCCATCTTGGCCT
ACAACCGTGGTCGAGAACGGTGGCTGAACCGGGATTTGCTGGGGGCTATTGAACAGCTCAGCTTGGCTCTGCAACGGGAT
CCCTGCCTGGCCAACGCCTACATTTTGCGGGGAGAAGCCTACTTTGCCCTCGGCCAAGTTCCCCAGGCCCTGGAGGATTT
CGGCCAGGCGATCCGGTTGGCCCCGCGGCGACCAGAACCCTATTTTTATCGCGGGCTGATTCGTCAATCTCAGGGGGATC
TCCAGGGAGCAACGGCGGAGTTTGCTGAGCTGGTGCGCCTACACCCCAATGTCCCCCACCACCTCAGCTTGGCCAACCTG
CTCATGCAACAGGGATCCCTGCCTTTGGCCCTAGCTCATCTGGATGAAGCCATTCGCTTGGATCCCACCTCAGCGCTTGC
CCATTCCCAGCGGGCCCGTTTGCACAGCTACCTGGGCGAATGGGAGGCGGCTTTGTCCGATTGGTCGCAGGCTATTGACT
GGGATCCCAGCCCAGCCCACTACTACCAGCGGGGGGTGACCTACGCCTGTGGTGATTACTTTGACGAGGCCATTGCCGAC
CTCAGCCGCAGCCTAGAAATAGAACCCCAACAGCCCAACGTTCTCTACATCAGGGGCAACCTTCTCTATGCGCTGGGGGA
GATCAAAGCTGCTTTGGACGACTACGAGCGGGCCTTTCGCCTGGAAGCGGACATGAACCGCATCGACCTCTCCGACGAGT
ATGGGTTGTACGGACGAGGGCTGGCCTACTGGAATATGGGGGATAAAGCGACAGCTTTTTCGGATTTGCAGGCAGCTTTG
CAGGTCAGCCGCCAACATCACAACCTGGCTCTGGAGCAGCGGGTGCGCCGGTCTCTGCTGCAACTGAGCAATCCCGACTG
GGATCCTGCGCAATCTGCCTAG

Upstream 100 bases:

>100_bases
CTGTTCGGCGTTTTTCGCTGCCAAATCGGGCAGAATCAGAGAGAAGCTCGCGAGCAGATTAAAAAAACAGGATACGCTCG
TAACAGCGGTGCAGAGCAGT

Downstream 100 bases:

>100_bases
CGGGATTTGATTGATTGATTTGCAGGTGCCTCCCCTGACGCTGCGACTCCACGACGCTGCCGCTGAGGCCCAGATCCCGA
AACGCCTGCAGCCACTGAAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Peptidase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; O-Linked GlcNAc Transferase; Tetratricopeptide Repeat Family; TPR Repeat-Containing ; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; TPR Repeat Protein; Sel1 Repeat Family; O-Linked GlcNAc Transferase Protein; Protein Prenyltransferase Subunit Alpha; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; TPR-Domain-Containing Protein; Mitochondrial Outer Membrane; Zn-Dependent Protease; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MFRAHDSAGLRLLIAVALLLGSMASWRQDRLLAVMGLVGAAAISAFTRPAILAYNRGRERWLNRDLLGAIEQLSLALQRD
PCLANAYILRGEAYFALGQVPQALEDFGQAIRLAPRRPEPYFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANL
LMQQGSLPLALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWSQAIDWDPSPAHYYQRGVTYACGDYFDEAIAD
LSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEADMNRIDLSDEYGLYGRGLAYWNMGDKATAFSDLQAAL
QVSRQHHNLALEQRVRRSLLQLSNPDWDPAQSA

Sequences:

>Translated_353_residues
MFRAHDSAGLRLLIAVALLLGSMASWRQDRLLAVMGLVGAAAISAFTRPAILAYNRGRERWLNRDLLGAIEQLSLALQRD
PCLANAYILRGEAYFALGQVPQALEDFGQAIRLAPRRPEPYFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANL
LMQQGSLPLALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWSQAIDWDPSPAHYYQRGVTYACGDYFDEAIAD
LSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEADMNRIDLSDEYGLYGRGLAYWNMGDKATAFSDLQAAL
QVSRQHHNLALEQRVRRSLLQLSNPDWDPAQSA
>Mature_353_residues
MFRAHDSAGLRLLIAVALLLGSMASWRQDRLLAVMGLVGAAAISAFTRPAILAYNRGRERWLNRDLLGAIEQLSLALQRD
PCLANAYILRGEAYFALGQVPQALEDFGQAIRLAPRRPEPYFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANL
LMQQGSLPLALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWSQAIDWDPSPAHYYQRGVTYACGDYFDEAIAD
LSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEADMNRIDLSDEYGLYGRGLAYWNMGDKATAFSDLQAAL
QVSRQHHNLALEQRVRRSLLQLSNPDWDPAQSA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=214, Percent_Identity=30.8411214953271, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI32307150, Length=214, Percent_Identity=30.8411214953271, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI170784867, Length=158, Percent_Identity=29.746835443038, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI310123097, Length=212, Percent_Identity=25.4716981132075, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310110582, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI310131789, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=215, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=215, Percent_Identity=27.906976744186, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI17647755, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24585827, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24585829, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39533; Mature: 39533

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRAHDSAGLRLLIAVALLLGSMASWRQDRLLAVMGLVGAAAISAFTRPAILAYNRGRER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHH
WLNRDLLGAIEQLSLALQRDPCLANAYILRGEAYFALGQVPQALEDFGQAIRLAPRRPEP
HHCHHHHHHHHHHHHHHHCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANLLMQQGSLPLALAHLDEAIRL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCC
DPTSALAHSQRARLHSYLGEWEAALSDWSQAIDWDPSPAHYYQRGVTYACGDYFDEAIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEADMNRIDLSDEYGLYGRG
HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LAYWNMGDKATAFSDLQAALQVSRQHHNLALEQRVRRSLLQLSNPDWDPAQSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFRAHDSAGLRLLIAVALLLGSMASWRQDRLLAVMGLVGAAAISAFTRPAILAYNRGRER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHH
WLNRDLLGAIEQLSLALQRDPCLANAYILRGEAYFALGQVPQALEDFGQAIRLAPRRPEP
HHCHHHHHHHHHHHHHHHCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANLLMQQGSLPLALAHLDEAIRL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCC
DPTSALAHSQRARLHSYLGEWEAALSDWSQAIDWDPSPAHYYQRGVTYACGDYFDEAIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEADMNRIDLSDEYGLYGRG
HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LAYWNMGDKATAFSDLQAALQVSRQHHNLALEQRVRRSLLQLSNPDWDPAQSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA