| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is glgP [H]
Identifier: 86610115
GI number: 86610115
Start: 2772843
End: 2775443
Strand: Direct
Name: glgP [H]
Synonym: CYB_2688
Alternate gene names: 86610115
Gene position: 2772843-2775443 (Clockwise)
Preceding gene: 86610110
Following gene: 86610116
Centisome position: 91.01
GC content: 59.52
Gene sequence:
>2601_bases ATGAAGCCGCTACGCACGTTTAAGGTCACTCCCTACCTGCCTACTCCGCTGGAAAGTCTGCGCTTGTTGGCTTACAACCT GCATTTTAGTTGGAACGTAGAAACCCGCAGCCTATTCCGGCGCATGGATCCGGATCTGTGGGATGCCTGCAGCCACAACC CGGTGGCTCTTCTGGGCCGGATTCGGCAGGAACGGCTGGATGAGTTGGCGGAGGATCCCGGCTTTTTGGCCCAGTTGGAA CGGGCCAGCCAACAACTGCAGAGCTACCTGCAGGAAGACACTTGGTACCGCAAGTATCGTTCGGCCCAAGCGGTGGAAGG GGAGTGCTACGCTTATTTTTCGGCCGAGTTTGGTTTGGCCGATTGTCTGCCCCTCTACTCAGGCGGCTTGGGGGTTTTGG CCGGGGATCACCTCAAGGCGGCCAGCGACCTGGGCTTGCCCCTGGTGGGTGTGGGCTTGCTCTACCAAAAGGGGTATTTC CGCCAGTACCTCAACCCCGACGGCTGGCAGCAGGAACGCTACCCAGTTAACGATTTCTTTAACATGCCCCTGGAGCTGCA GAGAGATGCGGAGGGCCGCGAAATTCGCATTGAGGTGGATTATCCCAACCGCAAGGTGTTCGCCCGCATTTGGAAGGTGA CGGTGGGGAGGGTGCCCCTCTATCTTCTGGACACCAACATCGAGCCCAACAGCCAGTACGACCAAGACATCACCGATGAG CTGTACGGTGGCGACCAAGATCTGCGCATCCACCAGGAGATCATGCTGGGGATCGGCGGCGTGCGGGCTTTGCGCGCCCT TGGCATCCATCCCACCGTCTACCACATGAACGAAGGGCACTCCGCCTTTTTGGCAGTAGAGCGGATTCGCCTGTTGATGG TGGAGCAGGGGCTGAGCTTTGAAGAGGCCTGGCAGGTGGCCAAGTCCAGCCAGATGTTTACCACCCACACGCCGGTGCCC GCCGGGATTGACTTGTTCCCGCCCGACAAGATCGATTACTACCTCGGCTTCTACTACAGCCAGATGGGCCTGAGCCGGGA GCGCTTTTTGGCTTTGGGACGGGAAAATACCGGCGACTTCCAATCTCCCTTCAGCATGGCAGTGCTGGCCATCAACATGG CCTCTTTTGTGAACGGTGTGAGCAAGCTGCATGGGGCGGTTTCCCGCAAGATGTTCAGCCGGCTGTGGCCTGGGATCCCG CTGGAAGAAGTGCCGATTACTTCCATCACCAACGGGGTACATGTCCGCACCTGGGTGGGGGAGGAGAACCAAGCCCTCTA CGACCGCTACCTGGGGCCGGATTGGGCAGAGGCTCCTCCTTCGGATCCCCTCTGGCAAAAGGTGGATCGGATTCCGGATG GGGAATTGTGGCGGGCCCACGAGCGCAGCCGCTCCCGCCTGATTAACTTTACCCGCGAGCGCTTGATGGAACAGCTCCAG AAACGGGCTGCCTCAGCGGCTGAGATCCAACGGGCCTCTGAGGCCCTCAACCCGGAGGTGCTTACCATTGGGTTTGCCCG CCGCTTTGCCACCTACAAGCGGGCCACCCTTTTGTTCCACAACCTGGAACGGCTCAAGGCTTTGCTCAACCATCCTCAGT ACCCGATGCAGTTTATCTTTGCCGGCAAGGCCCACCCCCGCGACATACCCGGCAAAGAGCTGATCCGCCAGATCGTGCAG GTGTCGCGGCAGCCGGAGTTTCGCCAGCGCTTGGTTTTCATTGAGGACTACGACATGTATGTCACCAGCTTGATGGTGGC CGGGGTGGATGTGTGGCTGAACAACCCCTTGCGCCCCCGGGAGGCCAGCGGCACCAGTGGCATGAAGGCGGCAGCCAACG GTGGACAGAACCTCAGTATTTTGGACGGCTGGTGGGACGAGGCTGACTATTACCAGACCGGCTGGCCCATTGGCCGCGGT GAGGAGTATGAGGATCGCGCCTATCAAGATGAGGTGGAGTCGAATGCCCTCTACGACCTGCTGGAACAAGAGGTTGCCCC TCTCTTCTACCAGCGCGGCAGCGATGGCCTACCCCATCAGTGGATCCAGCGCATGAAGCAGGCGATTCGCCTCAATTGCC CCCAGTTCAGCACGCAGCGCATGGTGTTGGAGTACGTCCAGCGAGCCTACATTCCTCTCAGCAACTACTTCGACCGCATG CGCCGTGACCACTTCGAGTCGGCCCGCCAGTTCGTTCGTTGGCAAAACCACCTGCAGGAGCATTGGTACAACATCCAGGT TCTCAACGTCCAGATCGAAACCCCGAAGAAAGCTGCCGCTGCCGGCCTTGCCTTGGCACAGGATGACCAAGTGGTGATGG CCAGGGATCCCCTCACCGTGACGGTGGAAGTGCGGCTGGGATCCCTGCAACCTCAGGATGTGATTGTGCAAGCTTATCAG GGGCCGGTCAAGGATGATGGCCAGATTCAGAAAGGACAGGCAATCTCCCTGCGCTATGTGGAGACGCTGGAGGATCGGGC CATCTTTTCCGGCCAGATTTGCTATGAGGCCAGCGGCTTGCAAGGGTTAGCCATCCGCTTGCTGCCCTTTCACCCCGATA TGCACGATCCCTATGAGCTGCGGTTGATGCTCTGGGCGTGA
Upstream 100 bases:
>100_bases CATCCACTGGATTACAAATCGACATTCAAGTTAAAAAGCCACGCCCTCAGCCTGAGGGCAAGGTAGCCTGACAGTGGAAA CAACGCTCCTCCCAGTCTTT
Downstream 100 bases:
>100_bases CATACTCCCATCACTGACCCTACGGGTACAGTGTGGGCTTCTCGCTTCATCGGGGAGCCTACGCAAGAACCCTCTGCGAG CAGACACGGGATGTCCCACC
Product: alpha-glucan phosphorylases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 866; Mature: 866
Protein sequence:
>866_residues MKPLRTFKVTPYLPTPLESLRLLAYNLHFSWNVETRSLFRRMDPDLWDACSHNPVALLGRIRQERLDELAEDPGFLAQLE RASQQLQSYLQEDTWYRKYRSAQAVEGECYAYFSAEFGLADCLPLYSGGLGVLAGDHLKAASDLGLPLVGVGLLYQKGYF RQYLNPDGWQQERYPVNDFFNMPLELQRDAEGREIRIEVDYPNRKVFARIWKVTVGRVPLYLLDTNIEPNSQYDQDITDE LYGGDQDLRIHQEIMLGIGGVRALRALGIHPTVYHMNEGHSAFLAVERIRLLMVEQGLSFEEAWQVAKSSQMFTTHTPVP AGIDLFPPDKIDYYLGFYYSQMGLSRERFLALGRENTGDFQSPFSMAVLAINMASFVNGVSKLHGAVSRKMFSRLWPGIP LEEVPITSITNGVHVRTWVGEENQALYDRYLGPDWAEAPPSDPLWQKVDRIPDGELWRAHERSRSRLINFTRERLMEQLQ KRAASAAEIQRASEALNPEVLTIGFARRFATYKRATLLFHNLERLKALLNHPQYPMQFIFAGKAHPRDIPGKELIRQIVQ VSRQPEFRQRLVFIEDYDMYVTSLMVAGVDVWLNNPLRPREASGTSGMKAAANGGQNLSILDGWWDEADYYQTGWPIGRG EEYEDRAYQDEVESNALYDLLEQEVAPLFYQRGSDGLPHQWIQRMKQAIRLNCPQFSTQRMVLEYVQRAYIPLSNYFDRM RRDHFESARQFVRWQNHLQEHWYNIQVLNVQIETPKKAAAAGLALAQDDQVVMARDPLTVTVEVRLGSLQPQDVIVQAYQ GPVKDDGQIQKGQAISLRYVETLEDRAIFSGQICYEASGLQGLAIRLLPFHPDMHDPYELRLMLWA
Sequences:
>Translated_866_residues MKPLRTFKVTPYLPTPLESLRLLAYNLHFSWNVETRSLFRRMDPDLWDACSHNPVALLGRIRQERLDELAEDPGFLAQLE RASQQLQSYLQEDTWYRKYRSAQAVEGECYAYFSAEFGLADCLPLYSGGLGVLAGDHLKAASDLGLPLVGVGLLYQKGYF RQYLNPDGWQQERYPVNDFFNMPLELQRDAEGREIRIEVDYPNRKVFARIWKVTVGRVPLYLLDTNIEPNSQYDQDITDE LYGGDQDLRIHQEIMLGIGGVRALRALGIHPTVYHMNEGHSAFLAVERIRLLMVEQGLSFEEAWQVAKSSQMFTTHTPVP AGIDLFPPDKIDYYLGFYYSQMGLSRERFLALGRENTGDFQSPFSMAVLAINMASFVNGVSKLHGAVSRKMFSRLWPGIP LEEVPITSITNGVHVRTWVGEENQALYDRYLGPDWAEAPPSDPLWQKVDRIPDGELWRAHERSRSRLINFTRERLMEQLQ KRAASAAEIQRASEALNPEVLTIGFARRFATYKRATLLFHNLERLKALLNHPQYPMQFIFAGKAHPRDIPGKELIRQIVQ VSRQPEFRQRLVFIEDYDMYVTSLMVAGVDVWLNNPLRPREASGTSGMKAAANGGQNLSILDGWWDEADYYQTGWPIGRG EEYEDRAYQDEVESNALYDLLEQEVAPLFYQRGSDGLPHQWIQRMKQAIRLNCPQFSTQRMVLEYVQRAYIPLSNYFDRM RRDHFESARQFVRWQNHLQEHWYNIQVLNVQIETPKKAAAAGLALAQDDQVVMARDPLTVTVEVRLGSLQPQDVIVQAYQ GPVKDDGQIQKGQAISLRYVETLEDRAIFSGQICYEASGLQGLAIRLLPFHPDMHDPYELRLMLWA >Mature_866_residues MKPLRTFKVTPYLPTPLESLRLLAYNLHFSWNVETRSLFRRMDPDLWDACSHNPVALLGRIRQERLDELAEDPGFLAQLE RASQQLQSYLQEDTWYRKYRSAQAVEGECYAYFSAEFGLADCLPLYSGGLGVLAGDHLKAASDLGLPLVGVGLLYQKGYF RQYLNPDGWQQERYPVNDFFNMPLELQRDAEGREIRIEVDYPNRKVFARIWKVTVGRVPLYLLDTNIEPNSQYDQDITDE LYGGDQDLRIHQEIMLGIGGVRALRALGIHPTVYHMNEGHSAFLAVERIRLLMVEQGLSFEEAWQVAKSSQMFTTHTPVP AGIDLFPPDKIDYYLGFYYSQMGLSRERFLALGRENTGDFQSPFSMAVLAINMASFVNGVSKLHGAVSRKMFSRLWPGIP LEEVPITSITNGVHVRTWVGEENQALYDRYLGPDWAEAPPSDPLWQKVDRIPDGELWRAHERSRSRLINFTRERLMEQLQ KRAASAAEIQRASEALNPEVLTIGFARRFATYKRATLLFHNLERLKALLNHPQYPMQFIFAGKAHPRDIPGKELIRQIVQ VSRQPEFRQRLVFIEDYDMYVTSLMVAGVDVWLNNPLRPREASGTSGMKAAANGGQNLSILDGWWDEADYYQTGWPIGRG EEYEDRAYQDEVESNALYDLLEQEVAPLFYQRGSDGLPHQWIQRMKQAIRLNCPQFSTQRMVLEYVQRAYIPLSNYFDRM RRDHFESARQFVRWQNHLQEHWYNIQVLNVQIETPKKAAAAGLALAQDDQVVMARDPLTVTVEVRLGSLQPQDVIVQAYQ GPVKDDGQIQKGQAISLRYVETLEDRAIFSGQICYEASGLQGLAIRLLPFHPDMHDPYELRLMLWA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI48994936, Length=605, Percent_Identity=25.6198347107438, Blast_Score=109, Evalue=9e-25, Organism=Escherichia coli, GI2367228, Length=570, Percent_Identity=25.0877192982456, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI32566204, Length=590, Percent_Identity=22.3728813559322, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17564550, Length=590, Percent_Identity=22.3728813559322, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI78706832, Length=580, Percent_Identity=22.4137931034483, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24581010, Length=580, Percent_Identity=22.4137931034483, Blast_Score=80, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 99658; Mature: 99658
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLRTFKVTPYLPTPLESLRLLAYNLHFSWNVETRSLFRRMDPDLWDACSHNPVALLGR CCCCCEEEECCCCCCCHHHHHEEEEEEEEEECCHHHHHHHHCCCCHHHHCCCCHHHHHHH IRQERLDELAEDPGFLAQLERASQQLQSYLQEDTWYRKYRSAQAVEGECYAYFSAEFGLA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCH DCLPLYSGGLGVLAGDHLKAASDLGLPLVGVGLLYQKGYFRQYLNPDGWQQERYPVNDFF HHHHHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH NMPLELQRDAEGREIRIEVDYPNRKVFARIWKVTVGRVPLYLLDTNIEPNSQYDQDITDE CCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH LYGGDQDLRIHQEIMLGIGGVRALRALGIHPTVYHMNEGHSAFLAVERIRLLMVEQGLSF HCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH EEAWQVAKSSQMFTTHTPVPAGIDLFPPDKIDYYLGFYYSQMGLSRERFLALGRENTGDF HHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC QSPFSMAVLAINMASFVNGVSKLHGAVSRKMFSRLWPGIPLEEVPITSITNGVHVRTWVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEEEC EENQALYDRYLGPDWAEAPPSDPLWQKVDRIPDGELWRAHERSRSRLINFTRERLMEQLQ CCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRAASAAEIQRASEALNPEVLTIGFARRFATYKRATLLFHNLERLKALLNHPQYPMQFIF HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGKAHPRDIPGKELIRQIVQVSRQPEFRQRLVFIEDYDMYVTSLMVAGVDVWLNNPLRPR ECCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEECHHHHHHHHHHHHHHHEECCCCCCC EASGTSGMKAAANGGQNLSILDGWWDEADYYQTGWPIGRGEEYEDRAYQDEVESNALYDL CCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEQEVAPLFYQRGSDGLPHQWIQRMKQAIRLNCPQFSTQRMVLEYVQRAYIPLSNYFDRM HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RRDHFESARQFVRWQNHLQEHWYNIQVLNVQIETPKKAAAAGLALAQDDQVVMARDPLTV HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHCCEEECCCCEEEEECCEEE TVEVRLGSLQPQDVIVQAYQGPVKDDGQIQKGQAISLRYVETLEDRAIFSGQICYEASGL EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCCC QGLAIRLLPFHPDMHDPYELRLMLWA CEEEEEEEECCCCCCCCEEEEEEEEC >Mature Secondary Structure MKPLRTFKVTPYLPTPLESLRLLAYNLHFSWNVETRSLFRRMDPDLWDACSHNPVALLGR CCCCCEEEECCCCCCCHHHHHEEEEEEEEEECCHHHHHHHHCCCCHHHHCCCCHHHHHHH IRQERLDELAEDPGFLAQLERASQQLQSYLQEDTWYRKYRSAQAVEGECYAYFSAEFGLA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCH DCLPLYSGGLGVLAGDHLKAASDLGLPLVGVGLLYQKGYFRQYLNPDGWQQERYPVNDFF HHHHHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH NMPLELQRDAEGREIRIEVDYPNRKVFARIWKVTVGRVPLYLLDTNIEPNSQYDQDITDE CCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH LYGGDQDLRIHQEIMLGIGGVRALRALGIHPTVYHMNEGHSAFLAVERIRLLMVEQGLSF HCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH EEAWQVAKSSQMFTTHTPVPAGIDLFPPDKIDYYLGFYYSQMGLSRERFLALGRENTGDF HHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC QSPFSMAVLAINMASFVNGVSKLHGAVSRKMFSRLWPGIPLEEVPITSITNGVHVRTWVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEEEC EENQALYDRYLGPDWAEAPPSDPLWQKVDRIPDGELWRAHERSRSRLINFTRERLMEQLQ CCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRAASAAEIQRASEALNPEVLTIGFARRFATYKRATLLFHNLERLKALLNHPQYPMQFIF HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGKAHPRDIPGKELIRQIVQVSRQPEFRQRLVFIEDYDMYVTSLMVAGVDVWLNNPLRPR ECCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEECHHHHHHHHHHHHHHHEECCCCCCC EASGTSGMKAAANGGQNLSILDGWWDEADYYQTGWPIGRGEEYEDRAYQDEVESNALYDL CCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEQEVAPLFYQRGSDGLPHQWIQRMKQAIRLNCPQFSTQRMVLEYVQRAYIPLSNYFDRM HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RRDHFESARQFVRWQNHLQEHWYNIQVLNVQIETPKKAAAAGLALAQDDQVVMARDPLTV HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHCCEEECCCCEEEEECCEEE TVEVRLGSLQPQDVIVQAYQGPVKDDGQIQKGQAISLRYVETLEDRAIFSGQICYEASGL EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCCC QGLAIRLLPFHPDMHDPYELRLMLWA CEEEEEEEECCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]