| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ywbL [H]
Identifier: 86610060
GI number: 86610060
Start: 2721474
End: 2722277
Strand: Direct
Name: ywbL [H]
Synonym: CYB_2629
Alternate gene names: 86610060
Gene position: 2721474-2722277 (Clockwise)
Preceding gene: 86610059
Following gene: 86610066
Centisome position: 89.33
GC content: 59.83
Gene sequence:
>804_bases ATGTCGGACTACACGTTCCTGGATGCTGCTTCGATTCTGCTGCGGGAGGGCCTGGAAGCTCTCTTGGTGCTGGTGGCACT GCTGGCCCTTATGAGCAAGAGCGGGCAATCGGCTCAGAAGCGCTGGGTGTGGATAGGGGGATCCGCGGGCTTGCTGGCAG CGGTGATGCTCGGTCTGCTGGTGAAGCTGTTTTTCCAGCAGATGCTCACCCACACGCGACAAGAGGTGCTGGAAGGGATC ACCGGGCTGGTGGCAGCAGGTTTGTTGTTCTCGGTCAGCCTTTGGTTGCACCGCCGGGCTGCAGTGGCTTCTTGGCAAAC CTTTGTGCGGGAACAGGCGCAGGCGGCACTGGCCACGGGTCAGGTTTTTTCCTTGGCTTTTCTGGCCTTTGTGGCGGTGT TTCGCGAGGGGGCGGAAACGGTGCTGTTTTATGTGGGGTTGGCCCCTTCCCTCTCGGCAAAAGATTTTTGGGCGGGGATC GGCCTGGGATCCCTGGTGTTGGTGGCACTGGCGATCTTGCTGCTGCAGGTGGGGCTGAAATTGCCGCTGGGAGTTTTTTT CCGGGGTCTAAGTCTGCTGGTTTTCTACTTGGGCTTTAAGTTTTTGGGCAGTGGCCTGCACGCTCTGCAGGTGGCGGACT GGCTGCCCATCACCCCCCTGGTCGGGATCCCAAAGCTGCGCTGGCTGGGCATATATCCCACTTGGCAGACGCTGCTCCCC CAACTGCTGCTGCTGGGAATAGCTTTCGCCTTGTGGGTGAGGCAATGGCTGCGGGCTGATTCTGCTCAGAGGCTTTCTTC GTGA
Upstream 100 bases:
>100_bases CGCTACTGCATCAATTCTGCTGCCCTCAAGTTCATCCCAGCCACCGCCTAGAAATCCTCTTGGCTCCAGCTAAAACTGAG CCGCCTGTCTGGGTGAGCCT
Downstream 100 bases:
>100_bases AAAACGCTCTCCACCGGCACTGGGGATCCCATAAGCCATAAGTTTGATGAATCCCTGTCCTGGTTTTGATGGATGGCAAT GATGCAGGTCACAATTTCAT
Product: iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSDYTFLDAASILLREGLEALLVLVALLALMSKSGQSAQKRWVWIGGSAGLLAAVMLGLLVKLFFQQMLTHTRQEVLEGI TGLVAAGLLFSVSLWLHRRAAVASWQTFVREQAQAALATGQVFSLAFLAFVAVFREGAETVLFYVGLAPSLSAKDFWAGI GLGSLVLVALAILLLQVGLKLPLGVFFRGLSLLVFYLGFKFLGSGLHALQVADWLPITPLVGIPKLRWLGIYPTWQTLLP QLLLLGIAFALWVRQWLRADSAQRLSS
Sequences:
>Translated_267_residues MSDYTFLDAASILLREGLEALLVLVALLALMSKSGQSAQKRWVWIGGSAGLLAAVMLGLLVKLFFQQMLTHTRQEVLEGI TGLVAAGLLFSVSLWLHRRAAVASWQTFVREQAQAALATGQVFSLAFLAFVAVFREGAETVLFYVGLAPSLSAKDFWAGI GLGSLVLVALAILLLQVGLKLPLGVFFRGLSLLVFYLGFKFLGSGLHALQVADWLPITPLVGIPKLRWLGIYPTWQTLLP QLLLLGIAFALWVRQWLRADSAQRLSS >Mature_266_residues SDYTFLDAASILLREGLEALLVLVALLALMSKSGQSAQKRWVWIGGSAGLLAAVMLGLLVKLFFQQMLTHTRQEVLEGIT GLVAAGLLFSVSLWLHRRAAVASWQTFVREQAQAALATGQVFSLAFLAFVAVFREGAETVLFYVGLAPSLSAKDFWAGIG LGSLVLVALAILLLQVGLKLPLGVFFRGLSLLVFYLGFKFLGSGLHALQVADWLPITPLVGIPKLRWLGIYPTWQTLLPQ LLLLGIAFALWVRQWLRADSAQRLSS
Specific function: Unknown
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 29092; Mature: 28961
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYTFLDAASILLREGLEALLVLVALLALMSKSGQSAQKRWVWIGGSAGLLAAVMLGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEEEECCCHHHHHHHHHHHH VKLFFQQMLTHTRQEVLEGITGLVAAGLLFSVSLWLHRRAAVASWQTFVREQAQAALATG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVFSLAFLAFVAVFREGAETVLFYVGLAPSLSAKDFWAGIGLGSLVLVALAILLLQVGLK HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC LPLGVFFRGLSLLVFYLGFKFLGSGLHALQVADWLPITPLVGIPKLRWLGIYPTWQTLLP CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHEEECCCCHHHHHH QLLLLGIAFALWVRQWLRADSAQRLSS HHHHHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure SDYTFLDAASILLREGLEALLVLVALLALMSKSGQSAQKRWVWIGGSAGLLAAVMLGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEEEECCCHHHHHHHHHHHH VKLFFQQMLTHTRQEVLEGITGLVAAGLLFSVSLWLHRRAAVASWQTFVREQAQAALATG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVFSLAFLAFVAVFREGAETVLFYVGLAPSLSAKDFWAGIGLGSLVLVALAILLLQVGLK HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC LPLGVFFRGLSLLVFYLGFKFLGSGLHALQVADWLPITPLVGIPKLRWLGIYPTWQTLLP CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHEEECCCCHHHHHH QLLLLGIAFALWVRQWLRADSAQRLSS HHHHHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]