| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609963
Identifier: 86609963
GI number: 86609963
Start: 2630603
End: 2632129
Strand: Direct
Name: 86609963
Synonym: CYB_2530
Alternate gene names: NA
Gene position: 2630603-2632129 (Clockwise)
Preceding gene: 86609962
Following gene: 86609965
Centisome position: 86.34
GC content: 64.37
Gene sequence:
>1527_bases ATGGCTGAATTCGTCCCCCCGCCAGAAGCCCTGCCCACCTTGGATCGCTGGTGGGGATCCCTGCGGCAGCCGCAGGCGGA ACTGCCCCCGGCAGTGGTTCACCCTTCTTCCGCTCGTTTGGGCAGCCAATCCTGGGATGCCGATGTGGTGATTGCCGGCG GCACCTTGGGGATCCTTCTGGGGGCGGCTTTGGCCAAGCGGGGCTGGCGGGTGATCCTGCTGGAGCGCGGGATCCTGCGG GGGCGGGAGCAGGAGTGGAACACCTCACACCAGGAGCTGCAGGTGTTGTTAGAGCTGGAGCTGCTTACCCCGCCCGAGTG GGAGGCAGTCCAGGTTACCCACTACCCGAGGGGGCGGATTGGCTTTGGGGAGGGCCCCCACTGGTGGGTGGAGGGAGTGC TGAATGTGGGCGTGGATCCAGTCAGCCTCCTGGAGTTCCTCAAGCAGCATTTCCTGGCCTGGGGGGGCCAAGTGTGGGAG CAGACTGCCTTTCAAAGTGCCACCGTTCACCCCGATGGGATCTGCCTCCAGACCACCAAGGGACAGATCCGTGCTCAACT GCTGGTGGATGCCATGGGGCACCGCTCGCCCATCGCGGCCCAGGCTCGCCAAGGGCAGCCGCCAGATAGCGTCTGTCTGG TGGTGGGATCCTGTGCCCAGGGGCTGCCCGACCAACCCACGGGAGATCTCTTCTACAGCTTTACCCCAGCCCAGAATGGC TACCAGCCCTTTTGGGAAGCTTTCCCTGCCCGCGATGGGCGCACCACCTATCTTTTTACCTACTGCGACCGGGATCCCCG GCGGCCTAGTCTAGAGCAGCTCTGGCGGGATTACTGCCGGCTGCTGCCAGCCTACCAGGGGGTGGAGCTGGCCCAGATCC GCTGGGTGCGCAAGCTATGTGGCGTTTTCCCCGCCTACCGCCGCAGCCCGCTGCAACTGCCCTGGGATCGCCTATTGGCG GTGGGGGATAGCAGTGGCAGCCAGTCGCCTCTAAGCTTTGGCGGCTTTGGCGCCATGTTGCGCCACCTGGATCGCCTACA GCAGGGGATCCACGAGGCCCTGGCGCAACGGCAGTTGAACCAGGCAGCCCTGGCCCTGCTGCAACCCTACCAGCCCAACT TGGCCGTGACCTGGCTATTTCAGAAGGCCATGATTCCCCCTCTGCAGAACAAAAGTTGGGATCCCAATAGCATTAACCGC CTGTTGAGCAGGGTGTTTGCGGCCATGTTTGCCGCCGGCCCCCAGGTGGTGAAGCCCTTTTTGCAGGATGTAGTGCAGTT CGGCGGCTTGGCCCAGGCCCTGTGGGGGGCGATGAGTCGGGATCCTCGGTTGGTGGCCGGACTTTTGCCCCGGTTGGGGT TGCCGGAGTTGGTGGAATGGGCGGGCCACTTTGGCGCCCTTGGCCTCTACGAGCTGCTGCAAAGGCTAACAGATCGCCCG GAGCCGGAAACCAACCCCCAGGACTACTTCTGGAGACGGCGCCGCGAGGCTTGGCGCTACGGCTGCGGCCGGGATTACCT CTTTTAG
Upstream 100 bases:
>100_bases GTGTTGTTTCCGGGCAATGTCGGCGAGGTGGATACGCTGGTTTTGATTCATCGTCGCCTCAAAAGTCGGGGCTTGGTCTA GAGTGAAGTTCCTCCTGCCG
Downstream 100 bases:
>100_bases GGGTTCTGACCGTACACCGCCACCCCATAGGGCGGTACCTCCACAAGATCTCCTTGGCTTCCGGCGGGCAGAGAGGATCC CTTGCCCAACCACTGGGTCT
Product: oxidoreductase, FAD-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILR GREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWE QTAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLA VGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINR LLSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP EPETNPQDYFWRRRREAWRYGCGRDYLF
Sequences:
>Translated_508_residues MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILR GREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWE QTAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLA VGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINR LLSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP EPETNPQDYFWRRRREAWRYGCGRDYLF >Mature_507_residues AEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILRG REQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQ TAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNGY QPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLAV GDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRL LSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRPE PETNPQDYFWRRRREAWRYGCGRDYLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57152; Mature: 57021
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILL CCCCCCCCHHCCCHHHHHHHHCCCHHHCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHH GAALAKRGWRVILLERGILRGREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRI HHHHHHCCCEEEEEECHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC GFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQTAFQSATVHPDGICLQTTK CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCC GQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG HHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCEEEEECCCCCC YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLC CCHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH GVFPAYRRSPLQLPWDRLLAVGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLN HHCHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRLLSRVFAAMFAAGPQVVKPF HHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP HHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC EPETNPQDYFWRRRREAWRYGCGRDYLF CCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILL CCCCCCCHHCCCHHHHHHHHCCCHHHCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHH GAALAKRGWRVILLERGILRGREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRI HHHHHHCCCEEEEEECHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC GFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQTAFQSATVHPDGICLQTTK CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCC GQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG HHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCEEEEECCCCCC YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLC CCHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH GVFPAYRRSPLQLPWDRLLAVGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLN HHCHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRLLSRVFAAMFAAGPQVVKPF HHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP HHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC EPETNPQDYFWRRRREAWRYGCGRDYLF CCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA