| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609944
Identifier: 86609944
GI number: 86609944
Start: 2603950
End: 2604660
Strand: Direct
Name: 86609944
Synonym: CYB_2510
Alternate gene names: NA
Gene position: 2603950-2604660 (Clockwise)
Preceding gene: 86609940
Following gene: 86609946
Centisome position: 85.47
GC content: 57.52
Gene sequence:
>711_bases ATGGCGGCAAAGCAACTCAAGTTCTATTGGAGCCCCCAACACCAGCTCTTTAGCTGCGATGGCGCCAAGTTGGAGGGGCA CGGCTACATCCAAACCAACCCCTCCCATGACCTGGTTCACCTGCTCATTGCCGCCAACGGCAACATGCCCTGGCAGCCGG TGGAAAGCCGCGAGCAAACCTGCTTTGCCGAGTACAACGCGGTAATGCTGGAGCATCTGCTGGTGAACTGTTTTAATGCA GGAGCACTGGGATCCCTGCCTGCCCAGCAGATCATCCCAGAGGCGCGGAAGTTCTTGCGGTGGTTTGTTTCAGAACATTA CGCCCCTTTTCCGGTGTCTGAAGAAGAGGCTTTTCGTCGCTTTGCCGAGCACCTGGATATTGAGCGCATTGTGCGTTTGT TCCCCTATTTTTACAGTTTGCGAGCTTGGGAATGCTTCAGCCCCGATTACCGCGCCGAGACCTACGATCTGGAGTTCACC TCCGAGGATGATCCCGTTCGAGAGGCCCCGGAATGGGCGGCGGATCCCAACATTTTGGAGACTCAGGAGCTGGTGCGGCA AAAGCTCTCTGAGGCAGTAGCCGAGGCGGGCTCGATCCGGCCCAAACCGGAGCCCGTTTTCCCGCCAACTTCGTCAGCTT CTCCTCTGTCCGATCCCCCAGCCAAGACCAGGCAGAAAAAAACCGGACTCGGCTTCAAGCCTGCCCGTTGA
Upstream 100 bases:
>100_bases AATAAGCCGGCGCTCTCCTCCGTGGCCTATAGTTCATAGCAGCTCATCAGTGCAGGTGTAAGCTCTAAAAGGATCCCCTG GGTGAGGAGGAGAACTGAAC
Downstream 100 bases:
>100_bases TGGATCCCCTCACCCCTTTCCCGCAGGGAGAGGGGAAGACTAATCTGCGCCTTTCACTAGCCGACGAAAGGCCTTTTTGC CCACCTGCAAAATCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAAKQLKFYWSPQHQLFSCDGAKLEGHGYIQTNPSHDLVHLLIAANGNMPWQPVESREQTCFAEYNAVMLEHLLVNCFNA GALGSLPAQQIIPEARKFLRWFVSEHYAPFPVSEEEAFRRFAEHLDIERIVRLFPYFYSLRAWECFSPDYRAETYDLEFT SEDDPVREAPEWAADPNILETQELVRQKLSEAVAEAGSIRPKPEPVFPPTSSASPLSDPPAKTRQKKTGLGFKPAR
Sequences:
>Translated_236_residues MAAKQLKFYWSPQHQLFSCDGAKLEGHGYIQTNPSHDLVHLLIAANGNMPWQPVESREQTCFAEYNAVMLEHLLVNCFNA GALGSLPAQQIIPEARKFLRWFVSEHYAPFPVSEEEAFRRFAEHLDIERIVRLFPYFYSLRAWECFSPDYRAETYDLEFT SEDDPVREAPEWAADPNILETQELVRQKLSEAVAEAGSIRPKPEPVFPPTSSASPLSDPPAKTRQKKTGLGFKPAR >Mature_235_residues AAKQLKFYWSPQHQLFSCDGAKLEGHGYIQTNPSHDLVHLLIAANGNMPWQPVESREQTCFAEYNAVMLEHLLVNCFNAG ALGSLPAQQIIPEARKFLRWFVSEHYAPFPVSEEEAFRRFAEHLDIERIVRLFPYFYSLRAWECFSPDYRAETYDLEFTS EDDPVREAPEWAADPNILETQELVRQKLSEAVAEAGSIRPKPEPVFPPTSSASPLSDPPAKTRQKKTGLGFKPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26912; Mature: 26780
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKQLKFYWSPQHQLFSCDGAKLEGHGYIQTNPSHDLVHLLIAANGNMPWQPVESREQT CCCCCEEEEECCCCCEEECCCCEECCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHH CFAEYNAVMLEHLLVNCFNAGALGSLPAQQIIPEARKFLRWFVSEHYAPFPVSEEEAFRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FAEHLDIERIVRLFPYFYSLRAWECFSPDYRAETYDLEFTSEDDPVREAPEWAADPNILE HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCHH TQELVRQKLSEAVAEAGSIRPKPEPVFPPTSSASPLSDPPAKTRQKKTGLGFKPAR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure AAKQLKFYWSPQHQLFSCDGAKLEGHGYIQTNPSHDLVHLLIAANGNMPWQPVESREQT CCCCEEEEECCCCCEEECCCCEECCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHH CFAEYNAVMLEHLLVNCFNAGALGSLPAQQIIPEARKFLRWFVSEHYAPFPVSEEEAFRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FAEHLDIERIVRLFPYFYSLRAWECFSPDYRAETYDLEFTSEDDPVREAPEWAADPNILE HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCHH TQELVRQKLSEAVAEAGSIRPKPEPVFPPTSSASPLSDPPAKTRQKKTGLGFKPAR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA