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The map label for this gene is yrbE [C]

Identifier: 86609938

GI number: 86609938

Start: 2598753

End: 2599511

Strand: Direct

Name: yrbE [C]

Synonym: CYB_2505

Alternate gene names: 86609938

Gene position: 2598753-2599511 (Clockwise)

Preceding gene: 86609937

Following gene: 86609940

Centisome position: 85.3

GC content: 60.74

Gene sequence:

>759_bases
TTGCAGCGGGTGGGCAGCAGTTTTCTCCTGGCCGGCCAGGTGATTTTGCATCTGATGCGGGGTCGTATCCATCGCCGCAA
CACCCTGGATCAGCTTTCGGCGGTGGGTCTGGAGTCGCTGCTGATTGTTTTGATTACGGCGGTGGTGATCAGCGGTGTTT
TCACCATCCAGTTGGCGCGGGAGTTCATCAACTTTGGCGCTTCCTCGCTAATTGGGGGGGTTTTGGCGATTGCCCTTGCC
CGCGAGCTGACACCGGTGGTGACGGCCGTGATCTTGGCCGGACGGGTGGGATCCGCCTTTGCCGCCGAGCTGGGCACCAT
GAAGGTCACGGAGCAGATCGACGCTCTGCTGTTGTTACGCACCGATCCGGTGGATTATCTGGTGATCCCGCGGGTGCTGG
CTGCGGGGCTGATGCTGCCGGTGCTCACCATCCTCTCCCTGCTGACGGGGCTGGTGGGGGGGATGATCATCTGCGCTTCG
GCCTACAACATCTCTCCTGCAGTGTTTCTCAACTCGGCGCAAACCCTTCTGAGCTCCTGGGATTTGCTCGTCTGTTGTTT
GAAGGCGATGGTGTTTGGGTCTTTGATCGCCATTGTCGGCTCCAACTGGGGCCTTTCCACCAGCGGGGGAGCCAAGGGGG
TGGGTCGCTCCACCACCGATGCAGTGGTTACGGCGCTGCTGGGCGTGTTTGTCACCAACTTCCTTATTTCTTGGCTGTTG
TTTCAGGGGCCGGGGAGCGCCCTCAGCCGCGCGTTGTAG

Upstream 100 bases:

>100_bases
CCAGCGGAGCCGGCAACCCCGAAGGACTCCGCCCCCCTAACGGGGTCGCCAAAGCGTCGCCTAGCGATAACGGCTTCTTG
AGACGGAAACCATGAGCTGG

Downstream 100 bases:

>100_bases
CCACTTCTGCTGTCCCGTTAGCGTTGCGGAGCAATAGGGAGAGAGCTAGGATGGGATCCCCTTTCCCTTCAGCGGTGCAG
AGCACTTTGCGAGTAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MQRVGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALA
RELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDPVDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICAS
AYNISPAVFLNSAQTLLSSWDLLVCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLL
FQGPGSALSRAL

Sequences:

>Translated_252_residues
MQRVGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALA
RELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDPVDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICAS
AYNISPAVFLNSAQTLLSSWDLLVCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLL
FQGPGSALSRAL
>Mature_252_residues
MQRVGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALA
RELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDPVDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICAS
AYNISPAVFLNSAQTLLSSWDLLVCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLL
FQGPGSALSRAL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=222, Percent_Identity=32.4324324324324, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26303; Mature: 26303

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFINFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLR
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEE
TDPVDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLLVCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FQGPGSALSRAL
HCCCCHHHHCCC
>Mature Secondary Structure
MQRVGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFINFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLR
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEE
TDPVDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLLVCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FQGPGSALSRAL
HCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]