Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609716

Identifier: 86609716

GI number: 86609716

Start: 2379525

End: 2380301

Strand: Reverse

Name: 86609716

Synonym: CYB_2274

Alternate gene names: NA

Gene position: 2380301-2379525 (Counterclockwise)

Preceding gene: 86609717

Following gene: 86609715

Centisome position: 78.13

GC content: 48.52

Gene sequence:

>777_bases
ATGTCTAAGCTGGACTTAAAAAATGCACCTGGACACCAGGTACTGGCTGCGGCAGGTAAAAAGGCACTTCGACCGGGGGG
CTTTGGCGCTACCGAACGGCTCTTCAAGTTTGCCGAGTTCCGTCGAGGAGAAACTGTGCTGGAACTTGCCTCAGGCCTTG
GCTACACGGCTATTCGATTGGCAAAGCGCTATGGCATACATGTTACCGGCATTGAGAAAAATCCAGATAACATTGCTCGC
ACTCGCGCTAATGTTTCTGCAGCAGGGCTAGCCGGCCAAGTTGAGATCCTCGAGGGCGATATCTTTCACCTAGATCAAAT
CGATCAGAAATTTGACTATGTCTTGGCGGAAGCTATTTTAACAATGCAGTCCGATGCAGGAAAATCTAAGATTTTGTCAG
GGATTTACAATTGCCTCAAGCCAGGGGGTAAGTTCCTCAGCCATGAGCTGCGAGTTGAGGGATCCAACAGCGACGCTATC
CGCAAGGAGTTATCCTCCGTAATCCATGTCAATGCCAATCCTTTATCTACTGACAGCTGGCTTGCAACTGTTCAGCAAGC
AAATCTTACGGTTGTCCAGTATGCCACCGGCCCCTTAACTTTGCTCAATCCCGTTGCTATTGCTACAGAGGAAGGATTGC
CGACGCTCTTAACTATGGTGTGGAATGTGCTTACACGTCCTGTAATCCGGCAGCGGATCTTATCTATGAAGCAAATCTTT
AGCCGATATCGAAATAACCTAGGCTACATCATACTGATTGCCAAGAAGGAGGCTTAA

Upstream 100 bases:

>100_bases
AACCAACTTCGGAAGGAGGATGGATTGATCAGTAGTAAAGAAGTCTTCACTATCTGCTCCATGCTATATTTCCCAATTCT
GCAAAGCTTTGGAGTTACCT

Downstream 100 bases:

>100_bases
TGATGTCTCTTGTCTCCCCTGAGTCACCTTTTTTGCAGCTCAAAGATCACATTGCTTATTCTGTGGAAGGAGTTCTCAGC
AAGATCATTTGGAAAAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIAR
TRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAI
RKELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF
SRYRNNLGYIILIAKKEA

Sequences:

>Translated_258_residues
MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIAR
TRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAI
RKELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF
SRYRNNLGYIILIAKKEA
>Mature_257_residues
SKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRLAKRYGIHVTGIEKNPDNIART
RANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAILTMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIR
KELSSVIHVNANPLSTDSWLATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIFS
RYRNNLGYIILIAKKEA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28197; Mature: 28066

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRL
CCCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
AKRYGIHVTGIEKNPDNIARTRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAIL
HHHHCEEEEECCCCCHHHHHHHCCCHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH
TMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIRKELSSVIHVNANPLSTDSW
HHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCCCCHHH
LATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF
HHHHHHCCEEEEEECCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRYRNNLGYIILIAKKEA
HHHHCCCCEEEEEEECCC
>Mature Secondary Structure 
SKLDLKNAPGHQVLAAAGKKALRPGGFGATERLFKFAEFRRGETVLELASGLGYTAIRL
CCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
AKRYGIHVTGIEKNPDNIARTRANVSAAGLAGQVEILEGDIFHLDQIDQKFDYVLAEAIL
HHHHCEEEEECCCCCHHHHHHHCCCHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH
TMQSDAGKSKILSGIYNCLKPGGKFLSHELRVEGSNSDAIRKELSSVIHVNANPLSTDSW
HHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCCCCHHH
LATVQQANLTVVQYATGPLTLLNPVAIATEEGLPTLLTMVWNVLTRPVIRQRILSMKQIF
HHHHHHCCEEEEEECCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRYRNNLGYIILIAKKEA
HHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]