Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609690

Identifier: 86609690

GI number: 86609690

Start: 2353110

End: 2353625

Strand: Direct

Name: 86609690

Synonym: CYB_2248

Alternate gene names: NA

Gene position: 2353110-2353625 (Clockwise)

Preceding gene: 86609689

Following gene: 86609695

Centisome position: 77.24

GC content: 60.47

Gene sequence:

>516_bases
ATGACTGTTGCCTTTTCCTACCCGATCTTCGGCCCCAGCATTCAGTGCCCCCACTGTCGGCAAACGATTGCGGCCCTCAC
CCTGACCGATACCTACCTCTGCCCTCGCCATGGTGCATTTGAGGCGGATGCCGAACAAGAGGAGCTGGTACACCTGCAAT
CCGGACGGCGCTGGCGCTTTTGGGAAGGTCGCTGGTTTCGTCAGCACACCCACGCCGATGGGATCCGTTTTGAGATTCAT
GAAGAATTGGATCGGCTGCGCATGCAAGGAATGCGAGCCACTCAGGTGATCGTGGCCGAGCGCTACCGCCAGCTGCTCAC
CCCTTATCTGGAGCAGGGATCCCACCGTCGCCCCGGCCCACCTCGCCTCTATGGCTTGCCCGTCAGCTTCAGCTCCCAAA
TCCCAGAGGATAGGGGTGGATCCCCTCAGCGCTGGCGGGTGATCAACTTTGAGCTGACCTACGAGATCGACCCGGCCATG
CGGCAGCCGCAATCCCGTCTGCAACTGTGTGATTAG

Upstream 100 bases:

>100_bases
CTCCTCCGGTTTTGTCATGGGGATCCCCAAAAGGCAACATCTATAATGTGGACAACTGCGGATTTGCCCAGATATCCAGC
CGCGTTTTGTGGGGTTTCCT

Downstream 100 bases:

>100_bases
ACTGTGTGATTAGAAAGGCGAACAGGTAGAGAGCTGTTGGAAAATTGGTGGCTGCTCAAGTCTTCTAGGTTGTGTTGATC
TTTCATTTGAGCCAAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTVAFSYPIFGPSIQCPHCRQTIAALTLTDTYLCPRHGAFEADAEQEELVHLQSGRRWRFWEGRWFRQHTHADGIRFEIH
EELDRLRMQGMRATQVIVAERYRQLLTPYLEQGSHRRPGPPRLYGLPVSFSSQIPEDRGGSPQRWRVINFELTYEIDPAM
RQPQSRLQLCD

Sequences:

>Translated_171_residues
MTVAFSYPIFGPSIQCPHCRQTIAALTLTDTYLCPRHGAFEADAEQEELVHLQSGRRWRFWEGRWFRQHTHADGIRFEIH
EELDRLRMQGMRATQVIVAERYRQLLTPYLEQGSHRRPGPPRLYGLPVSFSSQIPEDRGGSPQRWRVINFELTYEIDPAM
RQPQSRLQLCD
>Mature_170_residues
TVAFSYPIFGPSIQCPHCRQTIAALTLTDTYLCPRHGAFEADAEQEELVHLQSGRRWRFWEGRWFRQHTHADGIRFEIHE
ELDRLRMQGMRATQVIVAERYRQLLTPYLEQGSHRRPGPPRLYGLPVSFSSQIPEDRGGSPQRWRVINFELTYEIDPAMR
QPQSRLQLCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20094; Mature: 19963

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAFSYPIFGPSIQCPHCRQTIAALTLTDTYLCPRHGAFEADAEQEELVHLQSGRRWRF
CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEE
WEGRWFRQHTHADGIRFEIHEELDRLRMQGMRATQVIVAERYRQLLTPYLEQGSHRRPGP
ECCCHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PRLYGLPVSFSSQIPEDRGGSPQRWRVINFELTYEIDPAMRQPQSRLQLCD
CCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHCCCHHHCCCCC
>Mature Secondary Structure 
TVAFSYPIFGPSIQCPHCRQTIAALTLTDTYLCPRHGAFEADAEQEELVHLQSGRRWRF
EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEE
WEGRWFRQHTHADGIRFEIHEELDRLRMQGMRATQVIVAERYRQLLTPYLEQGSHRRPGP
ECCCHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PRLYGLPVSFSSQIPEDRGGSPQRWRVINFELTYEIDPAMRQPQSRLQLCD
CCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA