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The map label for this gene is 86609686

Identifier: 86609686

GI number: 86609686

Start: 2348919

End: 2350535

Strand: Reverse

Name: 86609686

Synonym: CYB_2244

Alternate gene names: NA

Gene position: 2350535-2348919 (Counterclockwise)

Preceding gene: 86609687

Following gene: 86609684

Centisome position: 77.15

GC content: 60.42

Gene sequence:

>1617_bases
TTGGCTAGTTCAGAGTTTGCCCTGGAGCAGTTGCTCTTTGCCCCGGCCACGCCTGACCCCGACGCAGTGCGGGTAATCTA
CGCCTTCCCCAACACCTACGCAGTGGGGATCACCAGCTTGGGCTATCAAGTCATCTGGAGTCTGCTGGCCAGCCGCCGGG
ATGTGGCCGTCTCCCGCCTCTTTACGGATCTGGCTGAACCCCTGCCCCGGGAGCCGGAGCTGTTCGGCTTTTCCCTATCC
TGGGAGCTGGATTATGTCCATATCCTGGCTCTGCTGGAACGGCACGGGATCCCTCCCAGATCTGAGGAGCGGGAAGAAGC
CCACCCCTTGGTCTTTGGCGGCGGCCCGGTACTGACGGCCAACCCCGAGCCTTTTGCTGAGTTCTTTGACCTGATCTTGT
TGGGGGATGGGGAAGGTCTTCTGGAGAAGATGATCGAGGTCTATCGGGAGGTGCGCCAGGGATCCCGGGCTGAGAAATTG
CAGGCGCTAGCGCAGGTGCCAGGGATCTATGTGCCCGGCTTGTATGAACCCCAATACCGGGAGCCCGACGGCCCAGTGGA
GAAGGTGCTCCCCAAAGTGGCCGGGATCCCTAGCTCCATCCGCAAACACACCTTCCGCGGCAACACCCTCTCGGTTTCTA
CGGTGGTTACCCCCAAAGCGGCTTGGGAGAGCATCTACATGGTGGAGGTGGTGCGCAGCTGCCCGGAGATGTGTCGGTTT
TGCCTGGCCAGCTATCTCACCCTGCCTTTCCGGGTGGCGGATGTGGAGGGGCATTTGATCCCGGCGGTAGAGCGGGGGCT
GCAGGTCACTCAGCGGATTGGGTTGCTGGGGGCTTCTGTAACCCAGCACCCCCAATTTGAGCAGTTGCTGGAGCACTTGG
CCCAGGATCGCTTCGAGCAGGTGCGTCTCAGTTTGGCCTCGGTGCGCACCGCTACCGTAACCCCACGTCTGGCGCAGGTA
CTCTCCCGCCGGGGCAGCCAGTCCATTACGGTGGCCATCGAAAGTGGCTCAGAACAACTGCGCCAGATCATCAACAAGAA
GTTAAGCAACCCGGAAATCTTGGCAGCAGCAGCCCACGCCCAGGCTGGAGGTCTGAAGGGCATTAAGTTCTACGGCATGG
TAGGGATCCCGGCGGAAACCCAGGCGGATTTGGAGGCCACAGTGGATCTTTTCCAAGAGCTCAAAAAAGCGGCTCCCGGC
CTGCGCCTAACGCTGGGTTGCAGCACCTTTGTGCCCAAAGCCCACACCCCTTTTCAGTGGCACGGGGTGGATCCCAAAGC
CGAGAAAAAACTGCAGTTTTTCCAGAAACACCTGCGTCCCTTGGGGGTGGAGTTGCGCCCGGAAAGCTATAGCTGGTCGG
TGATCCAAGCCCTCATCTCGCGAGGGGATCGGCGGGTGGGAAAGGTCTTGCAGTTGGCGCGGGACTTTGGCGAATCTTTG
GGGAGCTACCGGCGCGCTTTCAAAGCGCTTAAAGGGCAACTGCCGCCTCTGGATTACTACGTGCACAGCCACTGGGATCC
AGGGGATCCCTTGCCTTGGCAACACATCGAAGGGCCCCTCACCCCAGAGCGACTGTTGCAACATCGCCAGGAAGCTCTTT
CTGTTCGCATCCCTTAG

Upstream 100 bases:

>100_bases
GCTAGCTTTTGTTAGCATGCAGGAGCCAAAAAAGTTCGGCAGGCAAATCAAAACTCTTCCGAGCCAGAACCCAAACCTCA
ATCCAACACAGCGGGATCCC

Downstream 100 bases:

>100_bases
AGATGTCTATTGGGGTTGTTTGCAGGCCGCAATGCTGCTGGCAATGACCGCCTCGGTTTCGGCCAAACCTTTCCAGCCCA
AGATCTGGGTTTCTTTCTTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MASSEFALEQLLFAPATPDPDAVRVIYAFPNTYAVGITSLGYQVIWSLLASRRDVAVSRLFTDLAEPLPREPELFGFSLS
WELDYVHILALLERHGIPPRSEEREEAHPLVFGGGPVLTANPEPFAEFFDLILLGDGEGLLEKMIEVYREVRQGSRAEKL
QALAQVPGIYVPGLYEPQYREPDGPVEKVLPKVAGIPSSIRKHTFRGNTLSVSTVVTPKAAWESIYMVEVVRSCPEMCRF
CLASYLTLPFRVADVEGHLIPAVERGLQVTQRIGLLGASVTQHPQFEQLLEHLAQDRFEQVRLSLASVRTATVTPRLAQV
LSRRGSQSITVAIESGSEQLRQIINKKLSNPEILAAAAHAQAGGLKGIKFYGMVGIPAETQADLEATVDLFQELKKAAPG
LRLTLGCSTFVPKAHTPFQWHGVDPKAEKKLQFFQKHLRPLGVELRPESYSWSVIQALISRGDRRVGKVLQLARDFGESL
GSYRRAFKALKGQLPPLDYYVHSHWDPGDPLPWQHIEGPLTPERLLQHRQEALSVRIP

Sequences:

>Translated_538_residues
MASSEFALEQLLFAPATPDPDAVRVIYAFPNTYAVGITSLGYQVIWSLLASRRDVAVSRLFTDLAEPLPREPELFGFSLS
WELDYVHILALLERHGIPPRSEEREEAHPLVFGGGPVLTANPEPFAEFFDLILLGDGEGLLEKMIEVYREVRQGSRAEKL
QALAQVPGIYVPGLYEPQYREPDGPVEKVLPKVAGIPSSIRKHTFRGNTLSVSTVVTPKAAWESIYMVEVVRSCPEMCRF
CLASYLTLPFRVADVEGHLIPAVERGLQVTQRIGLLGASVTQHPQFEQLLEHLAQDRFEQVRLSLASVRTATVTPRLAQV
LSRRGSQSITVAIESGSEQLRQIINKKLSNPEILAAAAHAQAGGLKGIKFYGMVGIPAETQADLEATVDLFQELKKAAPG
LRLTLGCSTFVPKAHTPFQWHGVDPKAEKKLQFFQKHLRPLGVELRPESYSWSVIQALISRGDRRVGKVLQLARDFGESL
GSYRRAFKALKGQLPPLDYYVHSHWDPGDPLPWQHIEGPLTPERLLQHRQEALSVRIP
>Mature_537_residues
ASSEFALEQLLFAPATPDPDAVRVIYAFPNTYAVGITSLGYQVIWSLLASRRDVAVSRLFTDLAEPLPREPELFGFSLSW
ELDYVHILALLERHGIPPRSEEREEAHPLVFGGGPVLTANPEPFAEFFDLILLGDGEGLLEKMIEVYREVRQGSRAEKLQ
ALAQVPGIYVPGLYEPQYREPDGPVEKVLPKVAGIPSSIRKHTFRGNTLSVSTVVTPKAAWESIYMVEVVRSCPEMCRFC
LASYLTLPFRVADVEGHLIPAVERGLQVTQRIGLLGASVTQHPQFEQLLEHLAQDRFEQVRLSLASVRTATVTPRLAQVL
SRRGSQSITVAIESGSEQLRQIINKKLSNPEILAAAAHAQAGGLKGIKFYGMVGIPAETQADLEATVDLFQELKKAAPGL
RLTLGCSTFVPKAHTPFQWHGVDPKAEKKLQFFQKHLRPLGVELRPESYSWSVIQALISRGDRRVGKVLQLARDFGESLG
SYRRAFKALKGQLPPLDYYVHSHWDPGDPLPWQHIEGPLTPERLLQHRQEALSVRIP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59881; Mature: 59749

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSEFALEQLLFAPATPDPDAVRVIYAFPNTYAVGITSLGYQVIWSLLASRRDVAVSRL
CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FTDLAEPLPREPELFGFSLSWELDYVHILALLERHGIPPRSEEREEAHPLVFGGGPVLTA
HHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCEEEEC
NPEPFAEFFDLILLGDGEGLLEKMIEVYREVRQGSRAEKLQALAQVPGIYVPGLYEPQYR
CCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
EPDGPVEKVLPKVAGIPSSIRKHTFRGNTLSVSTVVTPKAAWESIYMVEVVRSCPEMCRF
CCCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
CLASYLTLPFRVADVEGHLIPAVERGLQVTQRIGLLGASVTQHPQFEQLLEHLAQDRFEQ
HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VRLSLASVRTATVTPRLAQVLSRRGSQSITVAIESGSEQLRQIINKKLSNPEILAAAAHA
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCHHEEEHHHH
QAGGLKGIKFYGMVGIPAETQADLEATVDLFQELKKAAPGLRLTLGCSTFVPKAHTPFQW
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEE
HGVDPKAEKKLQFFQKHLRPLGVELRPESYSWSVIQALISRGDRRVGKVLQLARDFGESL
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GSYRRAFKALKGQLPPLDYYVHSHWDPGDPLPWQHIEGPLTPERLLQHRQEALSVRIP
HHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASSEFALEQLLFAPATPDPDAVRVIYAFPNTYAVGITSLGYQVIWSLLASRRDVAVSRL
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FTDLAEPLPREPELFGFSLSWELDYVHILALLERHGIPPRSEEREEAHPLVFGGGPVLTA
HHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCEEEEC
NPEPFAEFFDLILLGDGEGLLEKMIEVYREVRQGSRAEKLQALAQVPGIYVPGLYEPQYR
CCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
EPDGPVEKVLPKVAGIPSSIRKHTFRGNTLSVSTVVTPKAAWESIYMVEVVRSCPEMCRF
CCCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
CLASYLTLPFRVADVEGHLIPAVERGLQVTQRIGLLGASVTQHPQFEQLLEHLAQDRFEQ
HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VRLSLASVRTATVTPRLAQVLSRRGSQSITVAIESGSEQLRQIINKKLSNPEILAAAAHA
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCHHEEEHHHH
QAGGLKGIKFYGMVGIPAETQADLEATVDLFQELKKAAPGLRLTLGCSTFVPKAHTPFQW
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEE
HGVDPKAEKKLQFFQKHLRPLGVELRPESYSWSVIQALISRGDRRVGKVLQLARDFGESL
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GSYRRAFKALKGQLPPLDYYVHSHWDPGDPLPWQHIEGPLTPERLLQHRQEALSVRIP
HHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]