| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609678
Identifier: 86609678
GI number: 86609678
Start: 2340849
End: 2342864
Strand: Direct
Name: 86609678
Synonym: CYB_2234
Alternate gene names: NA
Gene position: 2340849-2342864 (Clockwise)
Preceding gene: 86609677
Following gene: 86609679
Centisome position: 76.83
GC content: 63.94
Gene sequence:
>2016_bases TTGGCCCGCCTGGGGATCGATGTGGGGGGCACCTTTACTGATCTGGTGCTCTTGCAGGATGGCCAGATGCAGACGGCGAA GGTGCTGTCTACCCCCAGCCCTGAGGAGGGGGTCTTTGCGGCGCTGGACAAGCTGGGGGTGCTCTGGGTTGACCTCTTCT GTCATGGCATGACGGTAGCCACCAACGCGCTGCTGGAGCGCAAGGGATCCCCCACCCTGTTTTTGACCACGGCGGGCTTT CGGGATGTGCTGGCCATTGCCCGTCAAAACCGCCCCTCTCTGTATGACCTGACACAGCCCAAGCCGGAGCCGGTGGTGCC CCGCCACCATTGCCTGGAGGTGAAGGAGCGCTGCAGCGTGGGTGGAGTGTTGGAGCCGCTCACCGATGCCGAAATCCGGC GGGTGGTGCAGGAGGTGGGGGAACGGGTGCAGCGGGATGGGATCCGCGCTATTGGGGTGGGGTTTTTGTTTTCTTTTCTC TACCCGGAGCACGAACAGCGGCTGGGAATGGCCTTGCGACAGGCTTTCCCGGAGCTACACCTTTCCCTGTCTTGCGAGGT GGCGCCGGAGTTCCGAGAATACGAGCGCTTCAGCACCACCGCCATCGATGCCTACCTCAGCCCGGCATTGGCGGGCTACC TGCACCGCTTGGCCCAAGGATGTCGGGAGCGAGGGATCCCCCAACCGTTGATCATGCAGTCTTCCGGCGGCGTGACCTCC ATCCCTCAGGCGGCGGCCCATGCTTCGGTGGCTTTGCTCTCAGGGCCGGCAGGCGGGGTTTATGGGGCGGCCTATCTGGG TCGCCTGAGTGGCTACCCCCACTTGCTCAGCTTCGATATGGGGGGAACCAGCACGGATGTGGCCTTGATCCAAGATGGGA TCCCCCAGGTTACTCCCGCAGCGGTGGTGTGCGGCTTGCCCGTGCAACAGCCCCAAATTGATATCCACACCGTCAGTGCC GGCGGCGGATCCCTGGCCCATTTGCTGCCCGGCGGTGGGCTTCAGGTGGGGCCAGAGAGTGCCGGATCCAACCCCGGGCC GGCCTGCTACGGTCGGGGGGGAAGGGCTCCGACGGTTACCGATGCCAACCTCTGGCTGGGGTACCTGCCGGATGGCGGGC GGCTGGGCAACTCGGTGCAGCTACGGCGGGAGCTGGCGGAACAGGCTATTGCCACGCTGGCGGATCCCTTGGGTTTGAGC TTGCAGGAAACTGCCGTTGGCATTCGCACCTTGGCCAACGTCGCTATGTCGCGGGCCTTGCGGGTGATCAGCGTGGAGCG GGGTTTGGATCCCGCCGATTTTGCCCTGTTGGCCTTCGGCGGAGCCGGGCCCATGCATGCCTGTGCTTTGGCAGAAGAGC TGGGCATCCGCACGATCTTGATCCCGGCTGCCTGTGGGGTGCTCTCGGCGCTGGGAATGGCTCTGGCAGATCTGCGGCGA GACTATCGGCGGGCCATCCTCCAACCTCTGCGGCAGCTCACGTCCGCTTCAGGGGGATCCCTGCTGGCCCAATGGGCAGA ACCCCTGATCCGCCAGGCGAGAGCCGATCTGCAGGAGCCGGCGCTGCACTTCAGCTTGGACTTGCGCTATCGCGGCCAGT CTTTTGAGTTGGAGATCCCGGTGCAGTTGTCAGATCCGATTCCTCATCTGGAGCAACAGTTTCACCAGGCCCACCGACAA CGCTATGGATGGCAGGATTTGGCCCAGCCGGTGGAGGTGATTCAGTTGCGTCTACAGGCGGTGCAGGCCCTACCCACCGT GCCTTTGACCGCACCCCCCCCCTTGCCAGGGGATCCCCTCAAGGATCGGCGAGAGGCATGGTTTGGGGGCAGGATGTGCT CGGTGCCGGTCTACGATCGGCAGCGCATGGATGTGGGGTTTCAACTGCGCGGGCCGGCAATTGTCGAGATGCCGGAGGCA ACGGCGGTGATCGAAGCCGGTTGGACAGGTGTCATTGACGAAGTGGGAACCCTAATCTTGAGCTGTGTTCGCGATAGCGG GACAAAGTCCTGGTGA
Upstream 100 bases:
>100_bases AAGAAGGCAAAAGAAATGCACGATGGAAGCCATGGTCGCATCAGCGTTGGGTAGCAACCTCGATCCGGCCAATCTGGATC AGACGGAAGCAAGCCGCAGC
Downstream 100 bases:
>100_bases GTCCATCCGCAAGCAGAGCGTCATGGTCATTTCGATTCAAACTAGGATACTGTGCCCACACCCAAAACGTTGCTCGCGTC GGCGTTGCGGAGCAATAATG
Product: hydantoinase/oxoprolinase family protein
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MARLGIDVGGTFTDLVLLQDGQMQTAKVLSTPSPEEGVFAALDKLGVLWVDLFCHGMTVATNALLERKGSPTLFLTTAGF RDVLAIARQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSVGGVLEPLTDAEIRRVVQEVGERVQRDGIRAIGVGFLFSFL YPEHEQRLGMALRQAFPELHLSLSCEVAPEFREYERFSTTAIDAYLSPALAGYLHRLAQGCRERGIPQPLIMQSSGGVTS IPQAAAHASVALLSGPAGGVYGAAYLGRLSGYPHLLSFDMGGTSTDVALIQDGIPQVTPAAVVCGLPVQQPQIDIHTVSA GGGSLAHLLPGGGLQVGPESAGSNPGPACYGRGGRAPTVTDANLWLGYLPDGGRLGNSVQLRRELAEQAIATLADPLGLS LQETAVGIRTLANVAMSRALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRTILIPAACGVLSALGMALADLRR DYRRAILQPLRQLTSASGGSLLAQWAEPLIRQARADLQEPALHFSLDLRYRGQSFELEIPVQLSDPIPHLEQQFHQAHRQ RYGWQDLAQPVEVIQLRLQAVQALPTVPLTAPPPLPGDPLKDRREAWFGGRMCSVPVYDRQRMDVGFQLRGPAIVEMPEA TAVIEAGWTGVIDEVGTLILSCVRDSGTKSW
Sequences:
>Translated_671_residues MARLGIDVGGTFTDLVLLQDGQMQTAKVLSTPSPEEGVFAALDKLGVLWVDLFCHGMTVATNALLERKGSPTLFLTTAGF RDVLAIARQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSVGGVLEPLTDAEIRRVVQEVGERVQRDGIRAIGVGFLFSFL YPEHEQRLGMALRQAFPELHLSLSCEVAPEFREYERFSTTAIDAYLSPALAGYLHRLAQGCRERGIPQPLIMQSSGGVTS IPQAAAHASVALLSGPAGGVYGAAYLGRLSGYPHLLSFDMGGTSTDVALIQDGIPQVTPAAVVCGLPVQQPQIDIHTVSA GGGSLAHLLPGGGLQVGPESAGSNPGPACYGRGGRAPTVTDANLWLGYLPDGGRLGNSVQLRRELAEQAIATLADPLGLS LQETAVGIRTLANVAMSRALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRTILIPAACGVLSALGMALADLRR DYRRAILQPLRQLTSASGGSLLAQWAEPLIRQARADLQEPALHFSLDLRYRGQSFELEIPVQLSDPIPHLEQQFHQAHRQ RYGWQDLAQPVEVIQLRLQAVQALPTVPLTAPPPLPGDPLKDRREAWFGGRMCSVPVYDRQRMDVGFQLRGPAIVEMPEA TAVIEAGWTGVIDEVGTLILSCVRDSGTKSW >Mature_670_residues ARLGIDVGGTFTDLVLLQDGQMQTAKVLSTPSPEEGVFAALDKLGVLWVDLFCHGMTVATNALLERKGSPTLFLTTAGFR DVLAIARQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSVGGVLEPLTDAEIRRVVQEVGERVQRDGIRAIGVGFLFSFLY PEHEQRLGMALRQAFPELHLSLSCEVAPEFREYERFSTTAIDAYLSPALAGYLHRLAQGCRERGIPQPLIMQSSGGVTSI PQAAAHASVALLSGPAGGVYGAAYLGRLSGYPHLLSFDMGGTSTDVALIQDGIPQVTPAAVVCGLPVQQPQIDIHTVSAG GGSLAHLLPGGGLQVGPESAGSNPGPACYGRGGRAPTVTDANLWLGYLPDGGRLGNSVQLRRELAEQAIATLADPLGLSL QETAVGIRTLANVAMSRALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRTILIPAACGVLSALGMALADLRRD YRRAILQPLRQLTSASGGSLLAQWAEPLIRQARADLQEPALHFSLDLRYRGQSFELEIPVQLSDPIPHLEQQFHQAHRQR YGWQDLAQPVEVIQLRLQAVQALPTVPLTAPPPLPGDPLKDRREAWFGGRMCSVPVYDRQRMDVGFQLRGPAIVEMPEAT AVIEAGWTGVIDEVGTLILSCVRDSGTKSW
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=725, Percent_Identity=33.9310344827586, Blast_Score=245, Evalue=1e-64, Organism=Caenorhabditis elegans, GI133901900, Length=717, Percent_Identity=28.7308228730823, Blast_Score=220, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322634, Length=635, Percent_Identity=32.755905511811, Blast_Score=260, Evalue=4e-70, Organism=Drosophila melanogaster, GI45550492, Length=738, Percent_Identity=32.520325203252, Blast_Score=277, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 71970; Mature: 71838
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLGIDVGGTFTDLVLLQDGQMQTAKVLSTPSPEEGVFAALDKLGVLWVDLFCHGMTVA CCEECCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH TNALLERKGSPTLFLTTAGFRDVLAIARQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSV HHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCC GGVLEPLTDAEIRRVVQEVGERVQRDGIRAIGVGFLFSFLYPEHEQRLGMALRQAFPELH CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHE LSLSCEVAPEFREYERFSTTAIDAYLSPALAGYLHRLAQGCRERGIPQPLIMQSSGGVTS EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC IPQAAAHASVALLSGPAGGVYGAAYLGRLSGYPHLLSFDMGGTSTDVALIQDGIPQVTPA CCHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCCHH AVVCGLPVQQPQIDIHTVSAGGGSLAHLLPGGGLQVGPESAGSNPGPACYGRGGRAPTVT HHEECCCCCCCCEEEEEEECCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE DANLWLGYLPDGGRLGNSVQLRRELAEQAIATLADPLGLSLQETAVGIRTLANVAMSRAL ECCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RVISVERGLDPADFALLAFGGAGPMHACALAEELGIRTILIPAACGVLSALGMALADLRR HHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHH DYRRAILQPLRQLTSASGGSLLAQWAEPLIRQARADLQEPALHFSLDLRYRGQSFELEIP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEE VQLSDPIPHLEQQFHQAHRQRYGWQDLAQPVEVIQLRLQAVQALPTVPLTAPPPLPGDPL EEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KDRREAWFGGRMCSVPVYDRQRMDVGFQLRGPAIVEMPEATAVIEAGWTGVIDEVGTLIL HHHHHHHHCCCEEECCCCCCHHCCCCEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHH SCVRDSGTKSW HHHHCCCCCCC >Mature Secondary Structure ARLGIDVGGTFTDLVLLQDGQMQTAKVLSTPSPEEGVFAALDKLGVLWVDLFCHGMTVA CEECCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH TNALLERKGSPTLFLTTAGFRDVLAIARQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSV HHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCC GGVLEPLTDAEIRRVVQEVGERVQRDGIRAIGVGFLFSFLYPEHEQRLGMALRQAFPELH CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHE LSLSCEVAPEFREYERFSTTAIDAYLSPALAGYLHRLAQGCRERGIPQPLIMQSSGGVTS EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC IPQAAAHASVALLSGPAGGVYGAAYLGRLSGYPHLLSFDMGGTSTDVALIQDGIPQVTPA CCHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCCHH AVVCGLPVQQPQIDIHTVSAGGGSLAHLLPGGGLQVGPESAGSNPGPACYGRGGRAPTVT HHEECCCCCCCCEEEEEEECCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE DANLWLGYLPDGGRLGNSVQLRRELAEQAIATLADPLGLSLQETAVGIRTLANVAMSRAL ECCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RVISVERGLDPADFALLAFGGAGPMHACALAEELGIRTILIPAACGVLSALGMALADLRR HHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHH DYRRAILQPLRQLTSASGGSLLAQWAEPLIRQARADLQEPALHFSLDLRYRGQSFELEIP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEE VQLSDPIPHLEQQFHQAHRQRYGWQDLAQPVEVIQLRLQAVQALPTVPLTAPPPLPGDPL EEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KDRREAWFGGRMCSVPVYDRQRMDVGFQLRGPAIVEMPEATAVIEAGWTGVIDEVGTLIL HHHHHHHHCCCEEECCCCCCHHCCCCEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHH SCVRDSGTKSW HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]