Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609677

Identifier: 86609677

GI number: 86609677

Start: 2339049

End: 2340305

Strand: Direct

Name: 86609677

Synonym: CYB_2233

Alternate gene names: NA

Gene position: 2339049-2340305 (Clockwise)

Preceding gene: 86609676

Following gene: 86609678

Centisome position: 76.77

GC content: 62.13

Gene sequence:

>1257_bases
ATGACCCCCCTCCAAGAAGCAGCAGAAGCAGCGGCCAAGCTGCTGGTATTCCGGGACATCTGCACCCACCCCCTAGCCCT
AGCCTGGCAGGAGCTAATCCAGCAGTTGATGAGTGGGGATCCCCTGCCGTGCTGGAGGGCCTACGGGCGCTGGTTTGAGC
TTTTGGCCCGGCAGGGCCTGAGCTGGCGGCAATGGCTGATCCGGGAGATCCGCTGGGCCGATAACCCCTTTGCCCGTGCA
GCGCTGCAGCCCCAAGGGATCCCAGAGCCTCTTATGCAGGCGGCCCGCCACGACCTGCGCTGTCTGCAAACCCTAGCGGA
CAGTCAGGAGACCATTGCCGAGCAGATGCAGGCGTTGGGGTTGGGGATCCCCTGGCCCGATGGGGAAACCGATAGCGCTG
GCTGGGATCCCCGCTCTTTTGCCGATTGGGGCCAGAGCTTGGAGACCTTAATTGCCCACTACCGCCAAAGGGGGGTAGGG
CTCTGTGGTCGCTACTGGGCCTTTCGCTGGGGGCCAGCAGGGCTAGAAGGGATCCCTGCTCCCGATCTGTCTGACTGGGA
GGAGATCTACGGCTACGAACGGCAGAAACAGCAGTTGGCGGCCAACACCGAAGCCCTGCTGCGGGGGGATCCGGCTTTGC
ATGTGTTGCTCTACGGGGCGCGGGGCACCGGCAAGTCTTCTCTGGTGAAGGCCTTGTTGCGCCGCTACGGCCTGCAGGGG
CTGCGCCTATTGGAGCTGAGGCGAACAGACTTGATTCAGTTGCCGGAGATTTTGGCAGAGCTGCGGGCGCAGGTGTTGCC
TTTCATCTTGTTTGTGGACGATCTCTCCTTTGAGGCAGAGGAAACCGAGTTCAAGCAGCTCAAGGTGCTCCTGGAGGGGG
ATCTCGTTGCGCCGCCCCCCAACGTGCGCCTTTATGCCACCAGCAACCGCCGCCATCTCATCCGCGAGTTTTTTGGCGAT
CGTCCCAATCCCCAAGATCAAGAAGTCCACGCCTGGGATACGGTCCAGGAAAAGCTGTCGCTGCGGGATCGCTTCGGCCT
CACCCTCACCTTCACCCCCTTCACCCAGGGAGATTACCTGGCAACCGTAGAACACTTGGCCCAGCGGCTGGGTTTCACCC
AATCTCTGGATGCCCTGCGCCGCCAGGCCTTAATCTGGGCCCAACAGCAAAACGGCTTTTCCGGTCGCACTGCCCGCCAG
TTCTTGGATGCCGTTCGGGCAGGGCTGGTGAAAGGCAACGATGGACTTCCGAGCTAG

Upstream 100 bases:

>100_bases
TGCCAGGTAACTCAAGCGCTCCGTGTTGTTAACGCAACTACCCCCAGTCTCCTCCCCTAGGGAGCGGATAAGCAACGCCA
AGTTAGAGCGGCTTCAAGCG

Downstream 100 bases:

>100_bases
AGGTGGTGACTATTCCAAACTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTC
TGTTTGTTTCCATTCGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTPLQEAAEAAAKLLVFRDICTHPLALAWQELIQQLMSGDPLPCWRAYGRWFELLARQGLSWRQWLIREIRWADNPFARA
ALQPQGIPEPLMQAARHDLRCLQTLADSQETIAEQMQALGLGIPWPDGETDSAGWDPRSFADWGQSLETLIAHYRQRGVG
LCGRYWAFRWGPAGLEGIPAPDLSDWEEIYGYERQKQQLAANTEALLRGDPALHVLLYGARGTGKSSLVKALLRRYGLQG
LRLLELRRTDLIQLPEILAELRAQVLPFILFVDDLSFEAEETEFKQLKVLLEGDLVAPPPNVRLYATSNRRHLIREFFGD
RPNPQDQEVHAWDTVQEKLSLRDRFGLTLTFTPFTQGDYLATVEHLAQRLGFTQSLDALRRQALIWAQQQNGFSGRTARQ
FLDAVRAGLVKGNDGLPS

Sequences:

>Translated_418_residues
MTPLQEAAEAAAKLLVFRDICTHPLALAWQELIQQLMSGDPLPCWRAYGRWFELLARQGLSWRQWLIREIRWADNPFARA
ALQPQGIPEPLMQAARHDLRCLQTLADSQETIAEQMQALGLGIPWPDGETDSAGWDPRSFADWGQSLETLIAHYRQRGVG
LCGRYWAFRWGPAGLEGIPAPDLSDWEEIYGYERQKQQLAANTEALLRGDPALHVLLYGARGTGKSSLVKALLRRYGLQG
LRLLELRRTDLIQLPEILAELRAQVLPFILFVDDLSFEAEETEFKQLKVLLEGDLVAPPPNVRLYATSNRRHLIREFFGD
RPNPQDQEVHAWDTVQEKLSLRDRFGLTLTFTPFTQGDYLATVEHLAQRLGFTQSLDALRRQALIWAQQQNGFSGRTARQ
FLDAVRAGLVKGNDGLPS
>Mature_417_residues
TPLQEAAEAAAKLLVFRDICTHPLALAWQELIQQLMSGDPLPCWRAYGRWFELLARQGLSWRQWLIREIRWADNPFARAA
LQPQGIPEPLMQAARHDLRCLQTLADSQETIAEQMQALGLGIPWPDGETDSAGWDPRSFADWGQSLETLIAHYRQRGVGL
CGRYWAFRWGPAGLEGIPAPDLSDWEEIYGYERQKQQLAANTEALLRGDPALHVLLYGARGTGKSSLVKALLRRYGLQGL
RLLELRRTDLIQLPEILAELRAQVLPFILFVDDLSFEAEETEFKQLKVLLEGDLVAPPPNVRLYATSNRRHLIREFFGDR
PNPQDQEVHAWDTVQEKLSLRDRFGLTLTFTPFTQGDYLATVEHLAQRLGFTQSLDALRRQALIWAQQQNGFSGRTARQF
LDAVRAGLVKGNDGLPS

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47412; Mature: 47280

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLQEAAEAAAKLLVFRDICTHPLALAWQELIQQLMSGDPLPCWRAYGRWFELLARQGL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
SWRQWLIREIRWADNPFARAALQPQGIPEPLMQAARHDLRCLQTLADSQETIAEQMQALG
HHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
LGIPWPDGETDSAGWDPRSFADWGQSLETLIAHYRQRGVGLCGRYWAFRWGPAGLEGIPA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCC
PDLSDWEEIYGYERQKQQLAANTEALLRGDPALHVLLYGARGTGKSSLVKALLRRYGLQG
CCCCCHHHHHCHHHHHHHHHHCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC
LRLLELRRTDLIQLPEILAELRAQVLPFILFVDDLSFEAEETEFKQLKVLLEGDLVAPPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCC
NVRLYATSNRRHLIREFFGDRPNPQDQEVHAWDTVQEKLSLRDRFGLTLTFTPFTQGDYL
CEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
ATVEHLAQRLGFTQSLDALRRQALIWAQQQNGFSGRTARQFLDAVRAGLVKGNDGLPS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TPLQEAAEAAAKLLVFRDICTHPLALAWQELIQQLMSGDPLPCWRAYGRWFELLARQGL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
SWRQWLIREIRWADNPFARAALQPQGIPEPLMQAARHDLRCLQTLADSQETIAEQMQALG
HHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
LGIPWPDGETDSAGWDPRSFADWGQSLETLIAHYRQRGVGLCGRYWAFRWGPAGLEGIPA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCC
PDLSDWEEIYGYERQKQQLAANTEALLRGDPALHVLLYGARGTGKSSLVKALLRRYGLQG
CCCCCHHHHHCHHHHHHHHHHCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC
LRLLELRRTDLIQLPEILAELRAQVLPFILFVDDLSFEAEETEFKQLKVLLEGDLVAPPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCC
NVRLYATSNRRHLIREFFGDRPNPQDQEVHAWDTVQEKLSLRDRFGLTLTFTPFTQGDYL
CEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
ATVEHLAQRLGFTQSLDALRRQALIWAQQQNGFSGRTARQFLDAVRAGLVKGNDGLPS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA