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The map label for this gene is ylmH [H]

Identifier: 86609679

GI number: 86609679

Start: 2343336

End: 2344115

Strand: Direct

Name: ylmH [H]

Synonym: CYB_2236

Alternate gene names: 86609679

Gene position: 2343336-2344115 (Clockwise)

Preceding gene: 86609678

Following gene: 86609683

Centisome position: 76.91

GC content: 58.97

Gene sequence:

>780_bases
TTGCGAGGGGCAGAGCATCGAGAAACCTTGGCACGGGTCTTGGATTTGGGAGAGCAAGCCCTCAAGACCTGGCAAGTGGT
CTGGAGCGACTTCCTCTCGCCACCGGAAATAGCAGAGGTGCAAGCTCGGCTGTGCAACTTGACCGAACTGCAAGTGTGGG
CTTGGGGAGGGTACCCTCAAGCAGAGCGCCAGCGCTTGGCCCTAGCTCGCTCTGAGGTGGGTCTGGATGTCCGGGATCCA
AAGTCCGACCCAGAAGGGATCCCATTGGCCGCCATTCAGATTCAGGGCAACTTTCTCTTCGACCCGGCCACCCACCGCGA
TTTTCTGGGAGCCCTTTTGGGAGCCGGCATCGCCCGCGAGAAAGTGGGAGACATCCTCCTGTTGGGGGACTCAGGCGCCC
AGGCCATCGTTGTGCCCGAAATGGTGGATTACCTCACCCTAAACCTGACGCAGGTGCGCACAGTGCCTGTCAAAGTAGGC
CGGATCCCCCTGAGCCAGTTGAACATTCAACCCCCCCGCGTCAAATCCATCACTAGCGTGGAAGCCTCTTTGCGCCTGGA
TGCGGTAGCCTCAGCCGGGTTTGGCATCTCCCGCAGCAAAATGGTGGAAGAAATCCAACGGGGGGAAGTGCGGGTCAATT
GGAAGCCCATTACCCAAGCCAGCTACACCGTTGGCCCTCAGGATTGGATTGCCATTCGCGGTCGGGGTCGGCTGCAAATC
GAAGAGGTAGCCGAAACGAAAAAAGGCCGCTTTCGAGTGCAAATGAGGCGGTATCTCTAG

Upstream 100 bases:

>100_bases
GCTACGCCCGCCGTGATTCCGGCTATCTAGCTTAGCATGGGAAAAACGGGACTGAACCACAGAGGTCGAAGCACCCCAAA
TGCTACCCAGAGCCGATTTG

Downstream 100 bases:

>100_bases
ATTTTTTCCTGTCTGAGTTTGGGGAGATCGTTACCTCCAGGAAAATGCTCTAGAAAAAAGAGAAAAAGGCCCAAGGGTAA
AGCAAATACTCCAAGTAAAA

Product: S4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRGAEHRETLARVLDLGEQALKTWQVVWSDFLSPPEIAEVQARLCNLTELQVWAWGGYPQAERQRLALARSEVGLDVRDP
KSDPEGIPLAAIQIQGNFLFDPATHRDFLGALLGAGIAREKVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVG
RIPLSQLNIQPPRVKSITSVEASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDWIAIRGRGRLQI
EEVAETKKGRFRVQMRRYL

Sequences:

>Translated_259_residues
MRGAEHRETLARVLDLGEQALKTWQVVWSDFLSPPEIAEVQARLCNLTELQVWAWGGYPQAERQRLALARSEVGLDVRDP
KSDPEGIPLAAIQIQGNFLFDPATHRDFLGALLGAGIAREKVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVG
RIPLSQLNIQPPRVKSITSVEASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDWIAIRGRGRLQI
EEVAETKKGRFRVQMRRYL
>Mature_259_residues
MRGAEHRETLARVLDLGEQALKTWQVVWSDFLSPPEIAEVQARLCNLTELQVWAWGGYPQAERQRLALARSEVGLDVRDP
KSDPEGIPLAAIQIQGNFLFDPATHRDFLGALLGAGIAREKVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVG
RIPLSQLNIQPPRVKSITSVEASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDWIAIRGRGRLQI
EEVAETKKGRFRVQMRRYL

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 28796; Mature: 28796

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAEHRETLARVLDLGEQALKTWQVVWSDFLSPPEIAEVQARLCNLTELQVWAWGGYPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCH
AERQRLALARSEVGLDVRDPKSDPEGIPLAAIQIQGNFLFDPATHRDFLGALLGAGIARE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHCCHHHH
KVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVGRIPLSQLNIQPPRVKSITSV
HHCCEEEECCCCCCEEEHHHHHHHHHCCHHHEEEEEEEECCCCHHHCCCCCCCCCHHHHH
EASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDWIAIRGRGRLQI
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEH
EEVAETKKGRFRVQMRRYL
HHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MRGAEHRETLARVLDLGEQALKTWQVVWSDFLSPPEIAEVQARLCNLTELQVWAWGGYPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCH
AERQRLALARSEVGLDVRDPKSDPEGIPLAAIQIQGNFLFDPATHRDFLGALLGAGIARE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHCCHHHH
KVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVGRIPLSQLNIQPPRVKSITSV
HHCCEEEECCCCCCEEEHHHHHHHHHCCHHHEEEEEEEECCCCHHHCCCCCCCCCHHHHH
EASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDWIAIRGRGRLQI
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEH
EEVAETKKGRFRVQMRRYL
HHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]