Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609672

Identifier: 86609672

GI number: 86609672

Start: 2334173

End: 2334544

Strand: Direct

Name: 86609672

Synonym: CYB_2228

Alternate gene names: NA

Gene position: 2334173-2334544 (Clockwise)

Preceding gene: 86609671

Following gene: 86609673

Centisome position: 76.61

GC content: 61.02

Gene sequence:

>372_bases
ATGGCTGAAAACCGGACTGGCGCGTTTATTGGTGGGCTGTTGCTGGGAACTGCTGTGGGCACCGCCATTGGCCTGCTCTT
GGCTCCCCGCAGCGGACGGGAGACGCGGCGACTGCTGAAGAAATCGGCAGAGGCCCTGCCAGAGGTGGCAGAAGATGTGA
CCAGCAGTCTGCAATATCAATCGGAAAAGTTGTTCGACGCTGCCCAACGCAGTTTGGATGAGGCTCTGCTGCGGCTGCAG
CAGGCAGTGGCGGTGGGCAAAGAAGCCATGTTGCAGAAGCGAAGGGAGCTGCTCCAAGCCCAGAACTCGCGTCCCTTTGG
CGGGGAAGAAGCTGACCTAGAAGCTCGGGATGGGGAGGAGGCGGCGGGATGA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCAAGCCCGCCGATCCCGCGAGATCTTCCCGCGAGATCTTAAGGTAGTCTGGTTTCGGGGCCACCCGTATC
CAACTCAACTCTGGCAAAGC

Downstream 100 bases:

>100_bases
ACGACCCGGTCTTTTGGCTCGGCCTCTCGGTAGGCCTGGTAGCAGTGGGCATTTTGGCAGTGATCCTGACCCTACTACCT
GCCGTCATTCAACTGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQ
QAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG

Sequences:

>Translated_123_residues
MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQ
QAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG
>Mature_122_residues
AENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQSEKLFDAAQRSLDEALLRLQQ
AVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEEAAG

Specific function: Unknown

COG id: COG4980

COG function: function code R; Gas vesicle protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13194; Mature: 13063

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEKLFDAAQRSLDEALLRLQQAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AAG
CCC
>Mature Secondary Structure 
AENRTGAFIGGLLLGTAVGTAIGLLLAPRSGRETRRLLKKSAEALPEVAEDVTSSLQYQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEKLFDAAQRSLDEALLRLQQAVAVGKEAMLQKRRELLQAQNSRPFGGEEADLEARDGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA