Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609667

Identifier: 86609667

GI number: 86609667

Start: 2327106

End: 2327495

Strand: Direct

Name: 86609667

Synonym: CYB_2223

Alternate gene names: NA

Gene position: 2327106-2327495 (Clockwise)

Preceding gene: 86609666

Following gene: 86609668

Centisome position: 76.38

GC content: 55.13

Gene sequence:

>390_bases
GTGGCTGGTCACTATCCACTCACCACTATCCAGGGTAAGGGTCGGGATAAAAGGCGAGGACACGATGCTGTTCGGATAAT
TCAGCACCGTCCTTTGCCTGAGGGCTTTGTGATTAAGACCGCTGCCATCAGCCGCAAGGCAGACGGGTGGTATGTGACCT
TGAGCCTGCAAGATTCGTCCGTCCCTGAGTTTACTCCTGAGTCTGCAACGCTGGAAAACACTACAGGGATCGACGTGGGA
CTGGACTCCTTTTTGGTGACCGACGCGGGGGAGTCTGTTCCAGTTCCCCAGTATTACCGCAGAGCCCAAAAGCGGTTAAA
GAGACTGCAGCGGGCAGTGTCTCGCGAGAAGAAGGGGTCAAACCGCCTATGGCTAGTGACTAGTGGATAG

Upstream 100 bases:

>100_bases
GATGGAGGGGCTGAGGCGCAGCCAGGGGGCCATTTTCGATCTTTGGGGATTGGCTTTGTTAGCTAGACCGGCGGGAAGCC
CCGCCTTCTGTTAGTGACTA

Downstream 100 bases:

>100_bases
TGACCAGTAGATAGTGAATAGTGACTATCCACTAACCACTATCCACTAACCACTATCTCAGCGCAAAGATTTTCATGACA
AAACAGCGAACTGGCTGGTA

Product: ISSoc11, transposase orfA, truncation

Products: NA

Alternate protein names: ISSoc11 Transposase OrfA Truncation; ISSoc3 OrfB Transposase; ISSoc11 Transposase OrfA; ISSoc5 Transposase; ISSoc10 OrfB Transposase

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVG
LDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG

Sequences:

>Translated_129_residues
MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVG
LDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG
>Mature_128_residues
AGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVGL
DSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGSNRLWLVTSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14405; Mature: 14273

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSS
CCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEECCCC
VPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGS
CCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NRLWLVTSG
CEEEEEECC
>Mature Secondary Structure 
AGHYPLTTIQGKGRDKRRGHDAVRIIQHRPLPEGFVIKTAAISRKADGWYVTLSLQDSS
CCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEECCCC
VPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRRAQKRLKRLQRAVSREKKGS
CCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NRLWLVTSG
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA