Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is suhB [H]

Identifier: 86609617

GI number: 86609617

Start: 2273704

End: 2274516

Strand: Reverse

Name: suhB [H]

Synonym: CYB_2170

Alternate gene names: 86609617

Gene position: 2274516-2273704 (Counterclockwise)

Preceding gene: 86609620

Following gene: 86609616

Centisome position: 74.66

GC content: 59.9

Gene sequence:

>813_bases
TTGGATGTGGCCACAGAAGCTGCCCTGGAGGCAGGGGCTTTGCTGCGCAGTTATGTGGGAGGCACCCTTGCCATTGAGGA
GAAACGTCCGGGCGACTTGGTGACGGCGGCGGATCGCGCTTCCGAGGATCTCATCTTAAAAATCTTGAGGCGGCACTTCC
CCGAAGATGTCATCTTGACCGAGGAATCAGGCCAGCAGGGATCCCCGGAGGGTGCCTACGCTTGGATGATCGATCCCCTA
GATGGCACCACCAACTTTGCCCATGGCTACCCTTTTGCCGCCGTCTCCATTGGTTTGCTGCAGGGGCGGGAGCCGGTTTT
GGGGGTTGTTTGTGATGTTTTTCGCGGGGATCTGTTTCGCGCCGTCCAAGGAATGGGGGCCACCCGCAACCGTCAACCCA
TTCGAGTCTCCACAACGGCTGAATTGTCTCGGAGCCTGCTGGTTACCGGCTTTGCCTACGATCGTCGCGAAACCCCCGAC
AACAACTACGCCGAGTTTTGCCACTTTACCCATCTCACCCAAGGAGTGCGGCGCGGCGGATCTGCAGCTCTGGATTTGGC
CTATGTGGCCACCGGCCAGTTGGATGGCTATTGGGAGCGGGGCCTCTCCCCTTGGGACATTGCCGCAGGGATCGTTCTGG
TGCGGGAGGCAGGCGGCAAGGTGACCGCTTATGATGGCAGCCCGGTGGACGTTTACAGTGGCCGACTGTTGGCCAGCAAT
GGCTGGTTACACGCTGCTCTGCAAGAAGAATTGGCCCAAGTACAGCCTTTGCCGGTCTCCTTTCCCATGCGGCGGGATCC
CCACCCAACCTAG

Upstream 100 bases:

>100_bases
TTTCAGGGATCCCTTGGGAGCCACAGCCTCAGGCGGGCTATTCTGAGTAGCAGGTTTTTAACCTTGAGGTGAGGGTGTGA
CAGAGGCCCTGCTGCGTCGG

Downstream 100 bases:

>100_bases
AAAAACCGGGAAAGCTTGCCGGTTGAAAGAGTTGAATTCGAGACAGAAGTAGTTGAAGAATAATCAAGAAGACTACAAAA
CATCCGTGTCGGGCAGGGTA

Product: inositol monophosphatase family protein

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL
DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD
NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN
GWLHAALQEELAQVQPLPVSFPMRRDPHPT

Sequences:

>Translated_270_residues
MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL
DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD
NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN
GWLHAALQEELAQVQPLPVSFPMRRDPHPT
>Mature_270_residues
MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILTEESGQQGSPEGAYAWMIDPL
DGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFRAVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPD
NNYAEFCHFTHLTQGVRRGGSAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN
GWLHAALQEELAQVQPLPVSFPMRRDPHPT

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI5031789, Length=266, Percent_Identity=35.3383458646617, Blast_Score=158, Evalue=5e-39,
Organism=Homo sapiens, GI221625487, Length=266, Percent_Identity=35.3383458646617, Blast_Score=157, Evalue=7e-39,
Organism=Homo sapiens, GI7657236, Length=250, Percent_Identity=36, Blast_Score=138, Evalue=5e-33,
Organism=Homo sapiens, GI221625507, Length=158, Percent_Identity=33.5443037974684, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI1788882, Length=243, Percent_Identity=40.7407407407407, Blast_Score=167, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=34.0080971659919, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI193202570, Length=250, Percent_Identity=34, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320493, Length=224, Percent_Identity=37.0535714285714, Blast_Score=132, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6321836, Length=272, Percent_Identity=30.1470588235294, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24664922, Length=239, Percent_Identity=37.2384937238494, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI21357329, Length=265, Percent_Identity=35.8490566037736, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24664926, Length=227, Percent_Identity=35.2422907488987, Blast_Score=128, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21357303, Length=239, Percent_Identity=30.5439330543933, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24664918, Length=245, Percent_Identity=33.0612244897959, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI21357957, Length=216, Percent_Identity=33.7962962962963, Blast_Score=110, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 29254; Mature: 29254

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILT
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHCCHHHHHHHHHHHCCCCEEEE
EESGQQGSPEGAYAWMIDPLDGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFR
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPDNNYAEFCHFTHLTQGVRRGG
HHHCCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
SAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN
CCEEEEEEEEECCCCHHHHHCCCHHHHHHCEEEEEECCCEEEEECCCCCEEECCEEEECC
GWLHAALQEELAQVQPLPVSFPMRRDPHPT
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVATEAALEAGALLRSYVGGTLAIEEKRPGDLVTAADRASEDLILKILRRHFPEDVILT
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHCCHHHHHHHHHHHCCCCEEEE
EESGQQGSPEGAYAWMIDPLDGTTNFAHGYPFAAVSIGLLQGREPVLGVVCDVFRGDLFR
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVQGMGATRNRQPIRVSTTAELSRSLLVTGFAYDRRETPDNNYAEFCHFTHLTQGVRRGG
HHHCCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
SAALDLAYVATGQLDGYWERGLSPWDIAAGIVLVREAGGKVTAYDGSPVDVYSGRLLASN
CCEEEEEEEEECCCCHHHHHCCCHHHHHHCEEEEEECCCEEEEECCCCCEEECCEEEECC
GWLHAALQEELAQVQPLPVSFPMRRDPHPT
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]