| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609558
Identifier: 86609558
GI number: 86609558
Start: 2205522
End: 2206241
Strand: Reverse
Name: 86609558
Synonym: CYB_2111
Alternate gene names: NA
Gene position: 2206241-2205522 (Counterclockwise)
Preceding gene: 86609559
Following gene: 86609557
Centisome position: 72.41
GC content: 53.89
Gene sequence:
>720_bases ATGTATAGGCCGTTACCGGGAAAACCGTTTCTTTACCTATTGCTCTCAATAAGACAATTAATCTCAATAAGACAATTAAT TAAGATAGAAAGCCTGACTCCAATCCAATTGACCCCAGTCCAATCAAGAGCGAGGATGCAAACCATGAGCACGACTGCAA CTGCCACCACCGTTGTCCGGGTGCCGATTGTGGATGCCACCCCAGAAAATGTGCAACCCTTCGGCCAACTTATAGGGGAC GATGTGGCCAATCCTGGGCTGGGGATCCCCTTTTATCAGGGGCGTGTCCTGGAAGGACAGAACATCGACTTTCAATACAC CGGCAGAGCCGTTATCCGTACGGCTAAGATCCTGCCCGGATATCCACCTGTGCTCTGGCTGGAGCGCCACATGCGTATGA CCCAGTTGTTTGTCGGCCTGGGGCAAGAGCCGTTCATCATGGTGATGGCTCCTCCCAACCATCCCAAAGCAGCTCCCGAT CTCGACAAAGTACAAGCCCTGCGATTCCCTGCCGGGCATGGGCTGCTGCTGCACCTCGGCACGTGGCACGATTTCCCCAT TGCCTGCGAGCGCCCCGTTGTGGTGCTAACCGCCAACTCCGAAGAAGTGGTGGAAGCCCTGGCCAGCATGGAAGATGCCC ACGAAATGAATCAGGGAGATGTATTCAAAATTTCCCTCCCCCAACGGCTAAAAGCGGAGATCCACCTAGAGCTGGTGTAA
Upstream 100 bases:
>100_bases CGGCAAATTCGCCACATCATCGAGCGGTGGTTTAACCCGCAAAGCCCTCGAGAAGAACAAAGTTAAGAATTAAAAGTTAA GAATTAAATAAGAATCAAAG
Downstream 100 bases:
>100_bases ACTACCCGACATCAACCGCTAGGCGGTACGGAGCGGGCTTTTAGTAGCCCTGCAGTTGGCAAGCCAACCACGAGCCTCTG GGGTGGTTTACAGCACCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV
Sequences:
>Translated_239_residues MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV >Mature_239_residues MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVRVPIVDATPENVQPFGQLIGD DVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPGYPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPD LDKVQALRFPAGHGLLLHLGTWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26639; Mature: 26639
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCEEEEEEE VPIVDATPENVQPFGQLIGDDVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPG EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEHHHCCC YPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPDLDKVQALRFPAGHGLLLHLG CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEC TWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MYRPLPGKPFLYLLLSIRQLISIRQLIKIESLTPIQLTPVQSRARMQTMSTTATATTVVR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCEEEEEEE VPIVDATPENVQPFGQLIGDDVANPGLGIPFYQGRVLEGQNIDFQYTGRAVIRTAKILPG EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEHHHCCC YPPVLWLERHMRMTQLFVGLGQEPFIMVMAPPNHPKAAPDLDKVQALRFPAGHGLLLHLG CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEC TWHDFPIACERPVVVLTANSEEVVEALASMEDAHEMNQGDVFKISLPQRLKAEIHLELV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA