Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is chlM [H]

Identifier: 86609554

GI number: 86609554

Start: 2201189

End: 2201854

Strand: Reverse

Name: chlM [H]

Synonym: CYB_2107

Alternate gene names: 86609554

Gene position: 2201854-2201189 (Counterclockwise)

Preceding gene: 86609556

Following gene: 86609548

Centisome position: 72.27

GC content: 56.76

Gene sequence:

>666_bases
ATGCAAGAGAAAACCATTGTCCGCGATTACTTCAACTCCGTTGGCTTCGAGCGCTGGCGGCGCATTTATGGTGAAGAAGA
AGTCAATTTCGTCCAAAAAGACATCCGCCTTGGCCATGCTCGCACAGTAGAGACGGTGTTGCAGTGGTTGGGGGATCCCT
CGGGTTTACGCATTTGTGATGCCGGATGCGGGGTGGGCAGCCTCAGTTTGCCCTTGGCCACCAGAGGGGCGCAGGTGTTC
GCCAGCGACATCTCGGAACAAATGGTGAACGAAGCACGCCGCCGCCAGCAAATGGAGTTGGGATCCACAGACAACCCACA
CTTTTGGGTCTCGGATCTGGAGGAATTGACGGGGGAATACGATGTCGTCATCTGCCTCGATGTGATGATCCACTACCCTG
AAGCCGAGGCCCTGCGCATGCTAAAACACCTGACCTGCCTGGCCCAGTCCCGCCTGATCTTCAGTTTCGCTCCCAAAACC
CCCTGGCTGACGCTGCTGAAGAAAGTGGGAGAGTTCTTCCCCGGCCCCAGCAAAACCACCCGCGCCTATCAACACCGAGA
GGCGACCTTGGTGAGCCAATTAACCGAATGGGGCTGGAAAGTGCAGCAGCGACAAACCATTCGCAGCCGCTTCTACTTTG
CTTGGCTCCTCGATCTGGTTCGGTGA

Upstream 100 bases:

>100_bases
GCTCGGGGTAGAATGAGATGCGCATGGGCGAAGAAATGCCGGGTCTCGACAGAGCAGGGCGTTCCTCTTTTCTCTCGCCG
GATCCCTAGCTGGAAGTTCT

Downstream 100 bases:

>100_bases
CACTCGATCTGGTTCGTTAAACGGGAATGAAACATTTTCGTCTAGCTCCCCTCTCCCTCTGGCAGCGAGGCTGGGAGTAG
GGGCAGCAGCGTGGAATGCT

Product: Mg-protoporphyrin IX methyl transferase

Products: NA

Alternate protein names: Magnesium-protoporphyrin IX methyltransferase [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF
ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT
PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR

Sequences:

>Translated_221_residues
MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF
ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT
PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR
>Mature_221_residues
MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICDAGCGVGSLSLPLATRGAQVF
ASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEYDVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKT
PWLTLLKKVGEFFPGPSKTTRAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR

Specific function: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor [H]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010251
- InterPro:   IPR010940 [H]

Pfam domain/function: PF07109 Mg-por_mtran_C [H]

EC number: =2.1.1.11 [H]

Molecular weight: Translated: 25602; Mature: 25602

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICD
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
AGCGVGSLSLPLATRGAQVFASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
DVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKTPWLTLLKKVGEFFPGPSKTT
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHH
RAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQEKTIVRDYFNSVGFERWRRIYGEEEVNFVQKDIRLGHARTVETVLQWLGDPSGLRICD
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
AGCGVGSLSLPLATRGAQVFASDISEQMVNEARRRQQMELGSTDNPHFWVSDLEELTGEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
DVVICLDVMIHYPEAEALRMLKHLTCLAQSRLIFSFAPKTPWLTLLKKVGEFFPGPSKTT
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHH
RAYQHREATLVSQLTEWGWKVQQRQTIRSRFYFAWLLDLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704138; 8590279; 8905231 [H]