Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609511

Identifier: 86609511

GI number: 86609511

Start: 2160122

End: 2160466

Strand: Direct

Name: 86609511

Synonym: CYB_2063

Alternate gene names: NA

Gene position: 2160122-2160466 (Clockwise)

Preceding gene: 86609510

Following gene: 86609512

Centisome position: 70.9

GC content: 57.68

Gene sequence:

>345_bases
ATGTCTGCTGCCGAACCGACTACCTATCATTTTGTCGTTGCCAGCCTGTCTTTCTTACGTTCTGAGCCTCTGGAAGAGGT
GCTGGAGGAGCGTCGTCGATACTGCGAGGAGCACCATCACCCTGTCGATTTCTTCTGGGTGCCGCAGCCGGCCTTCATGG
AGGCTCCAGAGTTAAAGCCCCTGCGGGACAAGTTGAAGGAGCCCCTGGGGGCAGTGGTATCCACCAACGCGGATTTTATT
CGTTGGCTGAGCCTGCGCCTGACTTTTGTGGAAAAGGGCAGCTTTGTGGCTCCCAGCGAGTCGATCCCGGATCCCTTGCG
CTCCTTGTCTGCCGCAGGAAGCTAG

Upstream 100 bases:

>100_bases
CATCTGCTCAAATCTGCCTCTCTCTGAGGGAGAGGATCTGCAAGGAGCGGTGGACGCCCGGCTCTAGCCTTTATTCTCAA
CACAGTTCCACAGCAATCTT

Downstream 100 bases:

>100_bases
GCCTGCCGATTCCCAAGATTTGGGTTGGTGGATTGGAAGGCGGGCCAAGATAAGATCGGGGCACCCCATTTCCACTTTTG
TTTGCTGACGGGATCCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFI
RWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS

Sequences:

>Translated_114_residues
MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFI
RWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS
>Mature_113_residues
SAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKPLRDKLKEPLGAVVSTNADFIR
WLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019616 [H]

Pfam domain/function: PF10674 DUF2488 [H]

EC number: NA

Molecular weight: Translated: 12941; Mature: 12810

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKP
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCH
LRDKLKEPLGAVVSTNADFIRWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SAAEPTTYHFVVASLSFLRSEPLEEVLEERRRYCEEHHHPVDFFWVPQPAFMEAPELKP
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCH
LRDKLKEPLGAVVSTNADFIRWLSLRLTFVEKGSFVAPSESIPDPLRSLSAAGS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]