Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609496

Identifier: 86609496

GI number: 86609496

Start: 2149242

End: 2149673

Strand: Direct

Name: 86609496

Synonym: CYB_2049

Alternate gene names: NA

Gene position: 2149242-2149673 (Clockwise)

Preceding gene: 86609494

Following gene: 86609498

Centisome position: 70.54

GC content: 57.87

Gene sequence:

>432_bases
TTGAAAACAGAGAAACGGAGAAACCTGCTCCTCTATGGTACGGGGTTTGATCCCCTTTGCAAAGCGTCATATCCCCTCTC
AGCTTGGCACTCAAGGCTCCAGGGGGGACGTGGACTCTCGCGACAGGATCCCGTTCGCGTTGGCGGAACGGAGTCCTTTC
AAGCTCGCATCGCCGGGCCACAGACCCTGCAAGACTTGGGCAACACGGTGCCAGGGATCCAGCCGTTCCGTTCGCGTTGG
CGGGACGGAGCCCTTGCTGCTTTGAGGCTCTGGAGAAGACTGCTCAGAGGGAGCGGGATCCCTTTCTTCCAACTGCAGAG
AAAGCTGCTGCAACTGCATGTAGATGCTGTTCACGGCCAGCATGGCCAAGACCGTGCCAAAAAACTTGGTGCGGGATCCC
ATAGGTCAACCCCTGTGCGAGAACAAGAGTAG

Upstream 100 bases:

>100_bases
CCCCCAACCGGCTGAAATCGGCTGAAAGGATGGAAGGGGCGATCACAATCGGCTTTTGCCCAGAGGTCGCTGACGGCTGC
ACCATGGTGAGTCCTGGGGA

Downstream 100 bases:

>100_bases
GGTCGTCGCCGGTGCGTTAGCTCCACCTTAGCTCACAGGTTTGGCTGGCTGTTGCGAGAAAATAAACCTGTTTGCACCAG
ATCCTGCAAAGCCCTCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW
RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE

Sequences:

>Translated_143_residues
MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW
RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE
>Mature_143_residues
MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGPQTLQDLGNTVPGIQPFRSRW
RDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQHGQDRAKKLGAGSHRSTPVREQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16045; Mature: 16045

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGP
CCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCH
QTLQDLGNTVPGIQPFRSRWRDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQ
HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
HGQDRAKKLGAGSHRSTPVREQE
CCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTEKRRNLLLYGTGFDPLCKASYPLSAWHSRLQGGRGLSRQDPVRVGGTESFQARIAGP
CCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHCCCH
QTLQDLGNTVPGIQPFRSRWRDGALAALRLWRRLLRGSGIPFFQLQRKLLQLHVDAVHGQ
HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
HGQDRAKKLGAGSHRSTPVREQE
CCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA