| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609437
Identifier: 86609437
GI number: 86609437
Start: 2090888
End: 2092936
Strand: Reverse
Name: 86609437
Synonym: CYB_1988
Alternate gene names: NA
Gene position: 2092936-2090888 (Counterclockwise)
Preceding gene: 86609438
Following gene: 86609435
Centisome position: 68.7
GC content: 59.3
Gene sequence:
>2049_bases GTGAGTATCCATTCGCATGGCCCTAAGCTTCGTCCTGGAGACGAGCCTATGTGTAACCACTCTCCCAACCCCACTTTCAG CAGCATCCTGGAGAGCCGTTTGCAGCGGCGTCAAGTGTTGCAGGGGGGAATTGCTGCGGCGGTGGCCACCTTTTTTGGCT TGCCTGCGCTGAACGGTGCTTCCAAATCGGCAAAAGCCGCCAGTGGCAGTGCTTTGCTGGGCTTCAAGGCAATTCCTGTG AGCGCGGAAGACAAACTGGTGGTGCCCGAAGGCTACACTGCCCGTCCGCTGCTGGCTTGGGGTACTCCCATCACCGGCAC CTATCCACAGTTCAAGCTGGAAAACACCGGTGCCGAGCAGGGAATGCAGGTGGGCAGCCACCACGATGGCATGCACTTCT TCCCCATCGAAGGGAAGGATCCCTGGCAGGGCAGCTCCACCGAGGGTTTGCTGGTGTTTAACCACGAGTACGTCGAGCCT CGGTTTATGCATGCTGCGGCTGTGGGCCAAAAGCTGGATTCCGACTTGTATCCCACCAATCCTGACGGCAGCCGCGATCC CGACCAGGTGCTGAAAGAGCTGAATGGCCACGGGGTGAGCATTGTCCACATCAAGCAGCAGGGAGACGGCAGTTGGGAAG TGGTGCGGGATCGCCTCAACCGCCGCATCACCGGTCTTACCCTCATGGAGATCCAAGGGCCAGTGCGGGGATCCGACTTC GTGAAAACCAAGTTCAGCCCTGAAGGCACAATGACCCGGGGTACTTTGAACAACTGCGCCCACGGCGTCACTCCCTGGAA TACCTACCTCACCTGTGAGGAGAACTGGGCTGGCTACTTCAGCAACACCAGCAAAGGCCCCGACCAAAAGCCCAACCTGC CCCGGGAGCACAAGCGCTACGGCGTAAGCACCGAGACTTCCCGCTACGGCTGGGAGCTGGCCAGCAACAAGGCGGACGAG TTCATCCGCTTCAATGCCACCCCCACCGCTGCGGATGCCACCCAAGACTACCGCAATGAGCCCAACACTTTTGGCTGGGT GGTGGAGATCGATCCCTTTGATCCCAGCAGCACTCCCAAGAAGCGCACCGCTCTGGGCCGCTTCGCCCACGAAGGCGTGG TGTTCCAGCCGCCGGTGGAAGGCCAGCCGATTGTGGCCTACATGGGGGACGATGCCCGCTTTGAGTACATCTATAAGTAC GTCTCTGCCGAGCCCTACCGCAAGGAAACGGCGGGCGGACATCTGTTGGACAATGGCACCTTGTATGTGGCCAAGTTCAA CGAAGATGGCACAGGGGAGTGGCTGCCGCTGGTGTTTGGGAAAAACGGTCTAACCCCGGAAAACGGCTTCACCAGCCAAG CAGACGTGTTGGTGAATACCCGCACGGCGGCGGATTTTGTCGGTGCTACTAAAATGGACCGGCCTGAGTGGGGAGCGGTG GATCCGCAAACCCGCATGGTCTACTTCACCCTGACCAACAACAGCCGTCGGGAACAAGACCAGGTGAACGCTGCCAACCC CCGTCCCAAAAACAAGTGGGGTCACATCATCCGTTGGAAGGAAGCCAACGACCGGCCTCAAGCCACCCGTTTCGAGTGGG ATCTCTTTGTCTTGGCCGGGCCGCCGGAAGATAGCCGCAAGCTATCGGGCCAGCCCCTCAATGAAGACAACATCTTCAAC TCTCCCGATGGTCTGTGGTTCGATGCCAGCCGTCGCCTCTGGATCCAGACCGACACCAGCGACAGCAATCTCAACAAAGA GGAGTTTGCGCCTTTTGGCAACAACCAAATGTTGGCTGCCGATCCGGATACAGGGGAAATTCGCCGCTTCTTGACCGGGC CAATTGGGCAAGAGATCACCGGTGTGGTCACCACTCCCGATCAGCGCACCATGTTCATCAACGTGCAGCACCCAGGCGCC AGCACCAGCGAGGACGACTTTGCTGCCGGCAAGGTCAATTCTCGCTGGCCAGACTACGACCCCAATCTCTACCCCCGCTC GGCGGTGGTGGTGATCACCAAAAATGACGGCGGGATCATCGGTACCTAG
Upstream 100 bases:
>100_bases ATCCTCATGCGCGAATAGAGTAGCGCAGGGGTTAGGTGCTGTTTTATAAGACTCGCCAAGTTTCTAAACAAAACTTGTCA AGACAAGAGGAGAAGTCAAC
Downstream 100 bases:
>100_bases TTGTCTCTGAGGCCGTCAGCCCATAAAACCCAGCGGCAGGGATCCTTCATCTCTGCCGCTTTCTTGCACTTAACCCAGCA AGGCTGATCCCTGCAGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 682; Mature: 681
Protein sequence:
>682_residues MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPV SAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEP RFMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADE FIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKY VSAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFN SPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGA STSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT
Sequences:
>Translated_682_residues MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPV SAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEP RFMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADE FIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKY VSAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFN SPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGA STSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT >Mature_681_residues SIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPVS AEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPR FMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDFV KTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADEF IRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYV SAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAVD PQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFNS PDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGAS TSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75470; Mature: 75338
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC SKSAKAASGSALLGFKAIPVSAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQ CCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCCCEEECCCCHHH GMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPRFMHAAAVGQKLDSDLYPTN HHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCEECCEEEEEECCCCCCCCE VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRY EEEEECCCCCEECCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC GVSTETSRYGWELASNKADEFIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPK CCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCH KRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYVSAEPYRKETAGGHLLDNGT HHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEECCE LYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCC DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAG CCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEC PPEDSRKLSGQPLNEDNIFNSPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAA CCCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHCCCCCCCEEEEE DPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGASTSEDDFAAGKVNSRWPDYD CCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC PNLYPRSAVVVITKNDGGIIGT CCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure SIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC SKSAKAASGSALLGFKAIPVSAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQ CCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCCCEEECCCCHHH GMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPRFMHAAAVGQKLDSDLYPTN HHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCEECCEEEEEECCCCCCCCE VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRY EEEEECCCCCEECCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC GVSTETSRYGWELASNKADEFIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPK CCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCH KRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYVSAEPYRKETAGGHLLDNGT HHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEECCE LYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCC DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAG CCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEC PPEDSRKLSGQPLNEDNIFNSPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAA CCCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHCCCCCCCEEEEE DPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGASTSEDDFAAGKVNSRWPDYD CCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC PNLYPRSAVVVITKNDGGIIGT CCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA