Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609437

Identifier: 86609437

GI number: 86609437

Start: 2090888

End: 2092936

Strand: Reverse

Name: 86609437

Synonym: CYB_1988

Alternate gene names: NA

Gene position: 2092936-2090888 (Counterclockwise)

Preceding gene: 86609438

Following gene: 86609435

Centisome position: 68.7

GC content: 59.3

Gene sequence:

>2049_bases
GTGAGTATCCATTCGCATGGCCCTAAGCTTCGTCCTGGAGACGAGCCTATGTGTAACCACTCTCCCAACCCCACTTTCAG
CAGCATCCTGGAGAGCCGTTTGCAGCGGCGTCAAGTGTTGCAGGGGGGAATTGCTGCGGCGGTGGCCACCTTTTTTGGCT
TGCCTGCGCTGAACGGTGCTTCCAAATCGGCAAAAGCCGCCAGTGGCAGTGCTTTGCTGGGCTTCAAGGCAATTCCTGTG
AGCGCGGAAGACAAACTGGTGGTGCCCGAAGGCTACACTGCCCGTCCGCTGCTGGCTTGGGGTACTCCCATCACCGGCAC
CTATCCACAGTTCAAGCTGGAAAACACCGGTGCCGAGCAGGGAATGCAGGTGGGCAGCCACCACGATGGCATGCACTTCT
TCCCCATCGAAGGGAAGGATCCCTGGCAGGGCAGCTCCACCGAGGGTTTGCTGGTGTTTAACCACGAGTACGTCGAGCCT
CGGTTTATGCATGCTGCGGCTGTGGGCCAAAAGCTGGATTCCGACTTGTATCCCACCAATCCTGACGGCAGCCGCGATCC
CGACCAGGTGCTGAAAGAGCTGAATGGCCACGGGGTGAGCATTGTCCACATCAAGCAGCAGGGAGACGGCAGTTGGGAAG
TGGTGCGGGATCGCCTCAACCGCCGCATCACCGGTCTTACCCTCATGGAGATCCAAGGGCCAGTGCGGGGATCCGACTTC
GTGAAAACCAAGTTCAGCCCTGAAGGCACAATGACCCGGGGTACTTTGAACAACTGCGCCCACGGCGTCACTCCCTGGAA
TACCTACCTCACCTGTGAGGAGAACTGGGCTGGCTACTTCAGCAACACCAGCAAAGGCCCCGACCAAAAGCCCAACCTGC
CCCGGGAGCACAAGCGCTACGGCGTAAGCACCGAGACTTCCCGCTACGGCTGGGAGCTGGCCAGCAACAAGGCGGACGAG
TTCATCCGCTTCAATGCCACCCCCACCGCTGCGGATGCCACCCAAGACTACCGCAATGAGCCCAACACTTTTGGCTGGGT
GGTGGAGATCGATCCCTTTGATCCCAGCAGCACTCCCAAGAAGCGCACCGCTCTGGGCCGCTTCGCCCACGAAGGCGTGG
TGTTCCAGCCGCCGGTGGAAGGCCAGCCGATTGTGGCCTACATGGGGGACGATGCCCGCTTTGAGTACATCTATAAGTAC
GTCTCTGCCGAGCCCTACCGCAAGGAAACGGCGGGCGGACATCTGTTGGACAATGGCACCTTGTATGTGGCCAAGTTCAA
CGAAGATGGCACAGGGGAGTGGCTGCCGCTGGTGTTTGGGAAAAACGGTCTAACCCCGGAAAACGGCTTCACCAGCCAAG
CAGACGTGTTGGTGAATACCCGCACGGCGGCGGATTTTGTCGGTGCTACTAAAATGGACCGGCCTGAGTGGGGAGCGGTG
GATCCGCAAACCCGCATGGTCTACTTCACCCTGACCAACAACAGCCGTCGGGAACAAGACCAGGTGAACGCTGCCAACCC
CCGTCCCAAAAACAAGTGGGGTCACATCATCCGTTGGAAGGAAGCCAACGACCGGCCTCAAGCCACCCGTTTCGAGTGGG
ATCTCTTTGTCTTGGCCGGGCCGCCGGAAGATAGCCGCAAGCTATCGGGCCAGCCCCTCAATGAAGACAACATCTTCAAC
TCTCCCGATGGTCTGTGGTTCGATGCCAGCCGTCGCCTCTGGATCCAGACCGACACCAGCGACAGCAATCTCAACAAAGA
GGAGTTTGCGCCTTTTGGCAACAACCAAATGTTGGCTGCCGATCCGGATACAGGGGAAATTCGCCGCTTCTTGACCGGGC
CAATTGGGCAAGAGATCACCGGTGTGGTCACCACTCCCGATCAGCGCACCATGTTCATCAACGTGCAGCACCCAGGCGCC
AGCACCAGCGAGGACGACTTTGCTGCCGGCAAGGTCAATTCTCGCTGGCCAGACTACGACCCCAATCTCTACCCCCGCTC
GGCGGTGGTGGTGATCACCAAAAATGACGGCGGGATCATCGGTACCTAG

Upstream 100 bases:

>100_bases
ATCCTCATGCGCGAATAGAGTAGCGCAGGGGTTAGGTGCTGTTTTATAAGACTCGCCAAGTTTCTAAACAAAACTTGTCA
AGACAAGAGGAGAAGTCAAC

Downstream 100 bases:

>100_bases
TTGTCTCTGAGGCCGTCAGCCCATAAAACCCAGCGGCAGGGATCCTTCATCTCTGCCGCTTTCTTGCACTTAACCCAGCA
AGGCTGATCCCTGCAGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein

Number of amino acids: Translated: 682; Mature: 681

Protein sequence:

>682_residues
MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPV
SAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEP
RFMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF
VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADE
FIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKY
VSAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV
DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFN
SPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGA
STSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT

Sequences:

>Translated_682_residues
MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPV
SAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEP
RFMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF
VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADE
FIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKY
VSAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV
DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFN
SPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGA
STSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT
>Mature_681_residues
SIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGASKSAKAASGSALLGFKAIPVS
AEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQGMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPR
FMHAAAVGQKLDSDLYPTNPDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDFV
KTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRYGVSTETSRYGWELASNKADEF
IRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPKKRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYV
SAEPYRKETAGGHLLDNGTLYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAVD
PQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAGPPEDSRKLSGQPLNEDNIFNS
PDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAADPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGAS
TSEDDFAAGKVNSRWPDYDPNLYPRSAVVVITKNDGGIIGT

Specific function: Unknown

COG id: COG3211

COG function: function code R; Predicted phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75470; Mature: 75338

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC
SKSAKAASGSALLGFKAIPVSAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQ
CCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCCCEEECCCCHHH
GMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPRFMHAAAVGQKLDSDLYPTN
HHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
PDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF
CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCEECCEEEEEECCCCCCCCE
VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRY
EEEEECCCCCEECCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC
GVSTETSRYGWELASNKADEFIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPK
CCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCH
KRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYVSAEPYRKETAGGHLLDNGT
HHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEECCE
LYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCC
DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAG
CCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEC
PPEDSRKLSGQPLNEDNIFNSPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAA
CCCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHCCCCCCCEEEEE
DPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGASTSEDDFAAGKVNSRWPDYD
CCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PNLYPRSAVVVITKNDGGIIGT
CCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SIHSHGPKLRPGDEPMCNHSPNPTFSSILESRLQRRQVLQGGIAAAVATFFGLPALNGA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC
SKSAKAASGSALLGFKAIPVSAEDKLVVPEGYTARPLLAWGTPITGTYPQFKLENTGAEQ
CCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCCCEEECCCCHHH
GMQVGSHHDGMHFFPIEGKDPWQGSSTEGLLVFNHEYVEPRFMHAAAVGQKLDSDLYPTN
HHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
PDGSRDPDQVLKELNGHGVSIVHIKQQGDGSWEVVRDRLNRRITGLTLMEIQGPVRGSDF
CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCEECCEEEEEECCCCCCCCE
VKTKFSPEGTMTRGTLNNCAHGVTPWNTYLTCEENWAGYFSNTSKGPDQKPNLPREHKRY
EEEEECCCCCEECCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC
GVSTETSRYGWELASNKADEFIRFNATPTAADATQDYRNEPNTFGWVVEIDPFDPSSTPK
CCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCH
KRTALGRFAHEGVVFQPPVEGQPIVAYMGDDARFEYIYKYVSAEPYRKETAGGHLLDNGT
HHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEECCE
LYVAKFNEDGTGEWLPLVFGKNGLTPENGFTSQADVLVNTRTAADFVGATKMDRPEWGAV
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCC
DPQTRMVYFTLTNNSRREQDQVNAANPRPKNKWGHIIRWKEANDRPQATRFEWDLFVLAG
CCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEC
PPEDSRKLSGQPLNEDNIFNSPDGLWFDASRRLWIQTDTSDSNLNKEEFAPFGNNQMLAA
CCCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHCCCCCCCEEEEE
DPDTGEIRRFLTGPIGQEITGVVTTPDQRTMFINVQHPGASTSEDDFAAGKVNSRWPDYD
CCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PNLYPRSAVVVITKNDGGIIGT
CCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA