| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pstS-2 [H]
Identifier: 86609371
GI number: 86609371
Start: 2000172
End: 2001233
Strand: Reverse
Name: pstS-2 [H]
Synonym: CYB_1915
Alternate gene names: 86609371
Gene position: 2001233-2000172 (Counterclockwise)
Preceding gene: 86609373
Following gene: 86609370
Centisome position: 65.69
GC content: 57.16
Gene sequence:
>1062_bases ATGCGAACCCTGCTTTCTGCTTTCTCCCTCACCGCTCTAACAGTAGGATTTCTAACAGCGACCTCGGCTCAAGCCCAAAC CGTGCAAATCTCCGGGGCGGGCGCGACCTTTGCGGCTCCTTTGCTGCAACGTTGGTTTGACGCCTACAACCGCACCGTAG ACCCCACTGTGCAAGTCAGCTATCAGTCTGTCGGTAGTGGTGCTGGCCTAGAGCAGGTGATCAATGGCACTGTGGACTTC GGCGCTTCCGAGGCGCCTTTCTCCGGTGCTCGCCTGGAAAGCTTCCGAGCTAAATACCGCTATGAGCCCCTACAGTTGCC TATGGCGGGAGGGTCCATCGAGTTTGCCTATAACCTGCCCGGCATTGAAGACGGAGAGCTCATCCTGAAGCGGAAAACCT ACTGCGGCATCGTGACCGGCGAGATCACTCGCTGGGACGACATTCGCATCAAGGCCGAGAACCCACGCATAGCAAACAAG CTGCCACCCCTGGACATCACCTGGGTACACCGCTCTGATGGTTCTGGGACTACCTTTGTGTTCACCAACCACATCAGAAC TGTCTGCCCTAATTGGACAGCCGGTGCTGGTACTTCTGTCGAGTGGCCTGTTGGCATTGGAGCCCAAGGGAATGAGGGCG TAGCCGCCACCATCAAGCAGGAGCCAGGGGCAATTGGCTACGTGAACCAGTCCTATGCCAAGCTGGAAAAGATGGCCACT GCTCGCTTGGAAAACAAAGCGGGCAACATTGTTGAGTTCTCGACTGAGGCAGCTACCTCGGCGCTGGATGCTCCCATTCC TGATAACTTTGCGCTGTTGGTGCCCGACCCTGAAGGGCCAAATGACTACCCAATCGTGGGCTTGTTCTGGGTGATGCTGT ACCGCGAGTATCCCGATCAGCAGAAGCTGACCAAGCTGGTGGAGGCTCTGAAGTGGACCCAGGGGCCAGAGGGTCAAGCC ATCACCAAGGAGCTGGACTACATCCCTATGCCTGAGGCGGCTATCCAGCGGATCTTTGCAGAGCTGGATGCCATCACCGT TAACCCCAATGCGGTGCGATGA
Upstream 100 bases:
>100_bases ATTTTTTCTCTTGACTTAACCCAAAGTTAACCTTTAGATATCCCTCTGTTAACTTTGAGGTTATAGGGTTGAAAATGTTG ATTCGCCACAGATATTACCT
Downstream 100 bases:
>100_bases CTGGGTTGCAGCCTGAACTCCACTAGAGTGGAGCTGGTGGCCGGCTGAGGAGGCAGGTGAGGCTTTCTCGGTCGGCTGCT GGGGTTACCTTGCACGGTGG
Product: phosphate ABC transporter, phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MRTLLSAFSLTALTVGFLTATSAQAQTVQISGAGATFAAPLLQRWFDAYNRTVDPTVQVSYQSVGSGAGLEQVINGTVDF GASEAPFSGARLESFRAKYRYEPLQLPMAGGSIEFAYNLPGIEDGELILKRKTYCGIVTGEITRWDDIRIKAENPRIANK LPPLDITWVHRSDGSGTTFVFTNHIRTVCPNWTAGAGTSVEWPVGIGAQGNEGVAATIKQEPGAIGYVNQSYAKLEKMAT ARLENKAGNIVEFSTEAATSALDAPIPDNFALLVPDPEGPNDYPIVGLFWVMLYREYPDQQKLTKLVEALKWTQGPEGQA ITKELDYIPMPEAAIQRIFAELDAITVNPNAVR
Sequences:
>Translated_353_residues MRTLLSAFSLTALTVGFLTATSAQAQTVQISGAGATFAAPLLQRWFDAYNRTVDPTVQVSYQSVGSGAGLEQVINGTVDF GASEAPFSGARLESFRAKYRYEPLQLPMAGGSIEFAYNLPGIEDGELILKRKTYCGIVTGEITRWDDIRIKAENPRIANK LPPLDITWVHRSDGSGTTFVFTNHIRTVCPNWTAGAGTSVEWPVGIGAQGNEGVAATIKQEPGAIGYVNQSYAKLEKMAT ARLENKAGNIVEFSTEAATSALDAPIPDNFALLVPDPEGPNDYPIVGLFWVMLYREYPDQQKLTKLVEALKWTQGPEGQA ITKELDYIPMPEAAIQRIFAELDAITVNPNAVR >Mature_353_residues MRTLLSAFSLTALTVGFLTATSAQAQTVQISGAGATFAAPLLQRWFDAYNRTVDPTVQVSYQSVGSGAGLEQVINGTVDF GASEAPFSGARLESFRAKYRYEPLQLPMAGGSIEFAYNLPGIEDGELILKRKTYCGIVTGEITRWDDIRIKAENPRIANK LPPLDITWVHRSDGSGTTFVFTNHIRTVCPNWTAGAGTSVEWPVGIGAQGNEGVAATIKQEPGAIGYVNQSYAKLEKMAT ARLENKAGNIVEFSTEAATSALDAPIPDNFALLVPDPEGPNDYPIVGLFWVMLYREYPDQQKLTKLVEALKWTQGPEGQA ITKELDYIPMPEAAIQRIFAELDAITVNPNAVR
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=314, Percent_Identity=35.6687898089172, Blast_Score=201, Evalue=5e-53,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38322; Mature: 38322
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLLSAFSLTALTVGFLTATSAQAQTVQISGAGATFAAPLLQRWFDAYNRTVDPTVQVS CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE YQSVGSGAGLEQVINGTVDFGASEAPFSGARLESFRAKYRYEPLQLPMAGGSIEFAYNLP EECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECC GIEDGELILKRKTYCGIVTGEITRWDDIRIKAENPRIANKLPPLDITWVHRSDGSGTTFV CCCCCCEEEEECCEEEEEECCEEEEEEEEEEECCCCHHCCCCCCEEEEEEECCCCCEEEE FTNHIRTVCPNWTAGAGTSVEWPVGIGAQGNEGVAATIKQEPGAIGYVNQSYAKLEKMAT EECCHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHH ARLENKAGNIVEFSTEAATSALDAPIPDNFALLVPDPEGPNDYPIVGLFWVMLYREYPDQ HHHHCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCH QKLTKLVEALKWTQGPEGQAITKELDYIPMPEAAIQRIFAELDAITVNPNAVR HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCEEEECCCCCC >Mature Secondary Structure MRTLLSAFSLTALTVGFLTATSAQAQTVQISGAGATFAAPLLQRWFDAYNRTVDPTVQVS CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE YQSVGSGAGLEQVINGTVDFGASEAPFSGARLESFRAKYRYEPLQLPMAGGSIEFAYNLP EECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECC GIEDGELILKRKTYCGIVTGEITRWDDIRIKAENPRIANKLPPLDITWVHRSDGSGTTFV CCCCCCEEEEECCEEEEEECCEEEEEEEEEEECCCCHHCCCCCCEEEEEEECCCCCEEEE FTNHIRTVCPNWTAGAGTSVEWPVGIGAQGNEGVAATIKQEPGAIGYVNQSYAKLEKMAT EECCHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHH ARLENKAGNIVEFSTEAATSALDAPIPDNFALLVPDPEGPNDYPIVGLFWVMLYREYPDQ HHHHCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCH QKLTKLVEALKWTQGPEGQAITKELDYIPMPEAAIQRIFAELDAITVNPNAVR HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]