| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pstC-2 [H]
Identifier: 86609370
GI number: 86609370
Start: 1999040
End: 2000023
Strand: Reverse
Name: pstC-2 [H]
Synonym: CYB_1914
Alternate gene names: 86609370
Gene position: 2000023-1999040 (Counterclockwise)
Preceding gene: 86609371
Following gene: 86609369
Centisome position: 65.65
GC content: 56.2
Gene sequence:
>984_bases ATGACTTCAGCGGCTACGGGTTATGGTTCACCACCAAACCCGGATATCGATGTTGACATTGAGAAAAAGGCGAGCCTGTC TCGGGCTGTTGATGTGGGCTTTGTCCGCCTGACGCTGGCCTTGGCAGGGTTTGCCGGCATTATCCTCATCTGGGTGATTC TTCAAACCACCGAAGCGGCTCTGCTGGCGATTCAGCAGTTTGGCTTGGGCTTCCTGGTTACTGCCCGCTGGAACCCGGTG GAAAACATCTACGGGGTGCTACCACAGATTTATGGCAGTTTGGTAACCTCTCTGGTGGCTTTGATTTTTGCCATCCCTCT GGGCATTGGCACTGCCATCTTCCTGACGGAAGGTTTTGCCCCCAAGTGGGTAACGGAGCCGATTGGCTTTGCCATTGAGC TGATCGTGGCCACTCCCAGTGTGGTGCTGGGGCTATGGGGGATCTTTGTGCTGATTCCAGCAGTGCGGCCCATCTTTCGA GCCATTAACCAGACGCTGGGTTGGATCCCTTTCTTGGGTGGCCCGGCTCCGCGGGGGCCCAGCTTGTTGATAGTGGCTAT GGTGCTGGGGATCATGATCTCTCCCATCATCATCTCCATTACCCGCAGTACCTTTGAATCTCTACCACGCAGCCTAAAAG AGGGCGCTTTGGCTCTGGGGGCAACCCGCTGGGAGACCCTCTTAACGGTGATGATCCCTGCCGGCCTGTCGGGCATTGTC AGCTCGATCATGCTGGCGCTGGGACGGGCCCTGGGAGAGACCATGGTGGCGGCCATGCTTTCCGGCAACGCCAACCGCAT CAATATCTCCCTAATGCAGCCGGGATCCACCATTACTGGCTTGATTGCCTCTCAGTTTGGCGAGGCAGGACGCTTGCAGG TTTCGGCTCTCATGTATGCCGGCGTGGTGCTGATGGTGCTGACGTTATTGGTCAACATTGTTGCCGAGATCATCATCCGC AAGTTTCAAAACTTGGAGCAGTAA
Upstream 100 bases:
>100_bases GGAGGCAGGTGAGGCTTTCTCGGTCGGCTGCTGGGGTTACCTTGCACGGTGGGATTTTTAGGAAAGATTTTGAACCGAAG ATGATCATGGGAGAGAGGCT
Downstream 100 bases:
>100_bases CTTGGGAAGCAGAAAGAAGATGAAGGAGCACTGTTATCATGTCCGACTCAGCACAGCTTGCCCCTGAGAAGGTTGACATC GACATTACTCGTGCCGCCAT
Product: phosphate ABC transporter, permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTSAATGYGSPPNPDIDVDIEKKASLSRAVDVGFVRLTLALAGFAGIILIWVILQTTEAALLAIQQFGLGFLVTARWNPV ENIYGVLPQIYGSLVTSLVALIFAIPLGIGTAIFLTEGFAPKWVTEPIGFAIELIVATPSVVLGLWGIFVLIPAVRPIFR AINQTLGWIPFLGGPAPRGPSLLIVAMVLGIMISPIIISITRSTFESLPRSLKEGALALGATRWETLLTVMIPAGLSGIV SSIMLALGRALGETMVAAMLSGNANRINISLMQPGSTITGLIASQFGEAGRLQVSALMYAGVVLMVLTLLVNIVAEIIIR KFQNLEQ
Sequences:
>Translated_327_residues MTSAATGYGSPPNPDIDVDIEKKASLSRAVDVGFVRLTLALAGFAGIILIWVILQTTEAALLAIQQFGLGFLVTARWNPV ENIYGVLPQIYGSLVTSLVALIFAIPLGIGTAIFLTEGFAPKWVTEPIGFAIELIVATPSVVLGLWGIFVLIPAVRPIFR AINQTLGWIPFLGGPAPRGPSLLIVAMVLGIMISPIIISITRSTFESLPRSLKEGALALGATRWETLLTVMIPAGLSGIV SSIMLALGRALGETMVAAMLSGNANRINISLMQPGSTITGLIASQFGEAGRLQVSALMYAGVVLMVLTLLVNIVAEIIIR KFQNLEQ >Mature_326_residues TSAATGYGSPPNPDIDVDIEKKASLSRAVDVGFVRLTLALAGFAGIILIWVILQTTEAALLAIQQFGLGFLVTARWNPVE NIYGVLPQIYGSLVTSLVALIFAIPLGIGTAIFLTEGFAPKWVTEPIGFAIELIVATPSVVLGLWGIFVLIPAVRPIFRA INQTLGWIPFLGGPAPRGPSLLIVAMVLGIMISPIIISITRSTFESLPRSLKEGALALGATRWETLLTVMIPAGLSGIVS SIMLALGRALGETMVAAMLSGNANRINISLMQPGSTITGLIASQFGEAGRLQVSALMYAGVVLMVLTLLVNIVAEIIIRK FQNLEQ
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=271, Percent_Identity=41.3284132841328, Blast_Score=194, Evalue=9e-51, Organism=Escherichia coli, GI1790163, Length=296, Percent_Identity=27.3648648648649, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34572; Mature: 34441
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAATGYGSPPNPDIDVDIEKKASLSRAVDVGFVRLTLALAGFAGIILIWVILQTTEAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAIQQFGLGFLVTARWNPVENIYGVLPQIYGSLVTSLVALIFAIPLGIGTAIFLTEGFA HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC PKWVTEPIGFAIELIVATPSVVLGLWGIFVLIPAVRPIFRAINQTLGWIPFLGGPAPRGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SLLIVAMVLGIMISPIIISITRSTFESLPRSLKEGALALGATRWETLLTVMIPAGLSGIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH SSIMLALGRALGETMVAAMLSGNANRINISLMQPGSTITGLIASQFGEAGRLQVSALMYA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHH GVVLMVLTLLVNIVAEIIIRKFQNLEQ HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSAATGYGSPPNPDIDVDIEKKASLSRAVDVGFVRLTLALAGFAGIILIWVILQTTEAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAIQQFGLGFLVTARWNPVENIYGVLPQIYGSLVTSLVALIFAIPLGIGTAIFLTEGFA HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC PKWVTEPIGFAIELIVATPSVVLGLWGIFVLIPAVRPIFRAINQTLGWIPFLGGPAPRGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SLLIVAMVLGIMISPIIISITRSTFESLPRSLKEGALALGATRWETLLTVMIPAGLSGIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH SSIMLALGRALGETMVAAMLSGNANRINISLMQPGSTITGLIASQFGEAGRLQVSALMYA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHH GVVLMVLTLLVNIVAEIIIRKFQNLEQ HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]