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The map label for this gene is dppC [H]

Identifier: 86609339

GI number: 86609339

Start: 1967405

End: 1968298

Strand: Reverse

Name: dppC [H]

Synonym: CYB_1883

Alternate gene names: 86609339

Gene position: 1968298-1967405 (Counterclockwise)

Preceding gene: 86609340

Following gene: 86609338

Centisome position: 64.6

GC content: 58.72

Gene sequence:

>894_bases
ATGATCCCTTTTGCATCGCCTCGTGTTGCTGCTGCTGATGCCGATGGGGGGATGAAATTCTCAGAGTCCTCTGTCAAAGG
AGAGCGCAGGCGGCAGACTCTGTGGGCAATTGGACTGTGTGCTTTTTTTTTGGTGTCTATCCTCTGCAGCGCTGGGCTTA
TCGGCGATACCGGACTGAGCCCGAACCTAACTCAGCGGAATCAGCCTCCTTCCCTGGCCCATCCCTTCGGCACCGACTGG
CTGGGGCGGGATATGCTGGCCCGATCCTTGCACGGGATGTCCCTTAGTCTGTGGGTAGGCATGCTGGCTGCCGCCGTCAG
CGTGGTGATCGCCGCTGTTTTGGGTTTGGTGAGTGGCACGGTGGGAGGCTGGGTGGATGCCTCGATCTGCTGGATGATTG
ACCTATGTTTCAGCCTGCCTCACCTGGTGGTGCAGATCCTTATAGCTTTTGCTGTCGGCGGCGGAGTTCGGGGAGTCATT
GTTGCCGTTGCCCTCACCCACTGGCCCAGCCTAGCGCGCCTGGTGCGGGCCGAGGTGTTACAGGTCAGCAGTTCTGACTA
TGCCCAGAGTTCTTACCGACTGGGCCGCTCTTCCCTCTGGGTTGCCCGCTACCATATGATGCCTCACATTTTGCCCCAGC
TCCTAGTGGGACTTATTCTGCTGTTTCCCCACGCCATTTTGCACGAAGCAGCCCTCTCATTCATTGGGGTAGGTATTTCG
CCGCACCTACCGGCCATCGGCATTATTCTGGCCGAATCCATGCGCCACCTCTCCACCGGCTACTGGTGGCTGGGGGTTAT
GCCTGGACTGCTGCTGCTGCTGTCGGTCAAGGCTTTTGACTGGCTGGGAGAAAACCTGCAGGCCCTTCTCAATCCGCGTA
CGGCTCAGGAGTAG

Upstream 100 bases:

>100_bases
TTGTGTTTTTCAGCGCCTTGTTTGTCTATGCCGGCAATACCCTAGCTGACCTGTCCTACCAGATTGTCGATCCACGCATT
CGCCTTGGCGGGAGGATAGG

Downstream 100 bases:

>100_bases
GGAAATGTTGGTGGTCTCCGGCCTAAACATTAGGTTCAGCCGATACGAGCGGGGGCTGCGCCGCCGCTACCTTCAGGTGA
TTACAGATCTGGATCTGGAG

Product: peptide/opine/nickel ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIPFASPRVAAADADGGMKFSESSVKGERRRQTLWAIGLCAFFLVSILCSAGLIGDTGLSPNLTQRNQPPSLAHPFGTDW
LGRDMLARSLHGMSLSLWVGMLAAAVSVVIAAVLGLVSGTVGGWVDASICWMIDLCFSLPHLVVQILIAFAVGGGVRGVI
VAVALTHWPSLARLVRAEVLQVSSSDYAQSSYRLGRSSLWVARYHMMPHILPQLLVGLILLFPHAILHEAALSFIGVGIS
PHLPAIGIILAESMRHLSTGYWWLGVMPGLLLLLSVKAFDWLGENLQALLNPRTAQE

Sequences:

>Translated_297_residues
MIPFASPRVAAADADGGMKFSESSVKGERRRQTLWAIGLCAFFLVSILCSAGLIGDTGLSPNLTQRNQPPSLAHPFGTDW
LGRDMLARSLHGMSLSLWVGMLAAAVSVVIAAVLGLVSGTVGGWVDASICWMIDLCFSLPHLVVQILIAFAVGGGVRGVI
VAVALTHWPSLARLVRAEVLQVSSSDYAQSSYRLGRSSLWVARYHMMPHILPQLLVGLILLFPHAILHEAALSFIGVGIS
PHLPAIGIILAESMRHLSTGYWWLGVMPGLLLLLSVKAFDWLGENLQALLNPRTAQE
>Mature_297_residues
MIPFASPRVAAADADGGMKFSESSVKGERRRQTLWAIGLCAFFLVSILCSAGLIGDTGLSPNLTQRNQPPSLAHPFGTDW
LGRDMLARSLHGMSLSLWVGMLAAAVSVVIAAVLGLVSGTVGGWVDASICWMIDLCFSLPHLVVQILIAFAVGGGVRGVI
VAVALTHWPSLARLVRAEVLQVSSSDYAQSSYRLGRSSLWVARYHMMPHILPQLLVGLILLFPHAILHEAALSFIGVGIS
PHLPAIGIILAESMRHLSTGYWWLGVMPGLLLLLSVKAFDWLGENLQALLNPRTAQE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=232, Percent_Identity=34.4827586206897, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787054, Length=227, Percent_Identity=33.920704845815, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789964, Length=226, Percent_Identity=34.9557522123894, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=29.5833333333333, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=31.3636363636364, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787549, Length=212, Percent_Identity=25.4716981132075, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31886; Mature: 31886

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFASPRVAAADADGGMKFSESSVKGERRRQTLWAIGLCAFFLVSILCSAGLIGDTGLS
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PNLTQRNQPPSLAHPFGTDWLGRDMLARSLHGMSLSLWVGMLAAAVSVVIAAVLGLVSGT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGGWVDASICWMIDLCFSLPHLVVQILIAFAVGGGVRGVIVAVALTHWPSLARLVRAEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QVSSSDYAQSSYRLGRSSLWVARYHMMPHILPQLLVGLILLFPHAILHEAALSFIGVGIS
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHLPAIGIILAESMRHLSTGYWWLGVMPGLLLLLSVKAFDWLGENLQALLNPRTAQE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIPFASPRVAAADADGGMKFSESSVKGERRRQTLWAIGLCAFFLVSILCSAGLIGDTGLS
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PNLTQRNQPPSLAHPFGTDWLGRDMLARSLHGMSLSLWVGMLAAAVSVVIAAVLGLVSGT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGGWVDASICWMIDLCFSLPHLVVQILIAFAVGGGVRGVIVAVALTHWPSLARLVRAEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QVSSSDYAQSSYRLGRSSLWVARYHMMPHILPQLLVGLILLFPHAILHEAALSFIGVGIS
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHLPAIGIILAESMRHLSTGYWWLGVMPGLLLLLSVKAFDWLGENLQALLNPRTAQE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]